Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0561
(591 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y15758-1|CAC17466.1| 683|Homo sapiens LB1 protein. 30 7.0
EF560732-1|ABQ59042.1| 683|Homo sapiens CKAP2 protein protein. 30 7.0
BC130296-1|AAI30297.1| 682|Homo sapiens cytoskeleton associated... 30 7.0
AY062261-1|AAL47212.1| 682|Homo sapiens tumor-associated microt... 30 7.0
AL359513-5|CAH71660.2| 682|Homo sapiens cytoskeleton associated... 30 7.0
AK001611-1|BAA91788.1| 349|Homo sapiens protein ( Homo sapiens ... 30 7.0
AJ429398-1|CAD22295.1| 683|Homo sapiens cytoskeleton associated... 30 7.0
AF177227-1|AAG33675.1| 572|Homo sapiens CTCL tumor antigen se20... 30 7.0
AK124238-1|BAC85814.1| 137|Homo sapiens protein ( Homo sapiens ... 29 9.3
AK022982-1|BAB14345.1| 682|Homo sapiens protein ( Homo sapiens ... 29 9.3
>Y15758-1|CAC17466.1| 683|Homo sapiens LB1 protein.
Length = 683
Score = 29.9 bits (64), Expect = 7.0
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +2
Query: 134 DRLDGKAPIVREPERESIRADVDNRIKSALHDMETPNDELSTS 262
++L+ ++ + R + + DN+ K HD++TPN E TS
Sbjct: 545 EKLEMESKLHRNLLFQDCEKEQDNKTKDPTHDVKTPNTETRTS 587
>EF560732-1|ABQ59042.1| 683|Homo sapiens CKAP2 protein protein.
Length = 683
Score = 29.9 bits (64), Expect = 7.0
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +2
Query: 134 DRLDGKAPIVREPERESIRADVDNRIKSALHDMETPNDELSTS 262
++L+ ++ + R + + DN+ K HD++TPN E TS
Sbjct: 545 EKLEMESKLHRNLLFQDCEKEQDNKTKDPTHDVKTPNTETRTS 587
>BC130296-1|AAI30297.1| 682|Homo sapiens cytoskeleton associated
protein 2 protein.
Length = 682
Score = 29.9 bits (64), Expect = 7.0
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +2
Query: 134 DRLDGKAPIVREPERESIRADVDNRIKSALHDMETPNDELSTS 262
++L+ ++ + R + + DN+ K HD++TPN E TS
Sbjct: 544 EKLEMESKLHRNLLFQDCEKEQDNKTKDPTHDVKTPNTETRTS 586
>AY062261-1|AAL47212.1| 682|Homo sapiens tumor-associated
microtubule-associated protein protein.
Length = 682
Score = 29.9 bits (64), Expect = 7.0
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +2
Query: 134 DRLDGKAPIVREPERESIRADVDNRIKSALHDMETPNDELSTS 262
++L+ ++ + R + + DN+ K HD++TPN E TS
Sbjct: 544 EKLEMESKLHRNLLFQDCEKEQDNKTKDPTHDVKTPNTETRTS 586
>AL359513-5|CAH71660.2| 682|Homo sapiens cytoskeleton associated
protein 2 protein.
Length = 682
Score = 29.9 bits (64), Expect = 7.0
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +2
Query: 134 DRLDGKAPIVREPERESIRADVDNRIKSALHDMETPNDELSTS 262
++L+ ++ + R + + DN+ K HD++TPN E TS
Sbjct: 544 EKLEMESKLHRNLLFQDCEKEQDNKTKDPTHDVKTPNTETRTS 586
>AK001611-1|BAA91788.1| 349|Homo sapiens protein ( Homo sapiens
cDNA FLJ10749 fis, clone NT2RP3001915. ).
Length = 349
Score = 29.9 bits (64), Expect = 7.0
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +2
Query: 134 DRLDGKAPIVREPERESIRADVDNRIKSALHDMETPNDELSTS 262
++L+ ++ + R + + DN+ K HD++TPN E TS
Sbjct: 211 EKLEMESKLHRNLLFQDCEKEQDNKTKDPTHDVKTPNTETRTS 253
>AJ429398-1|CAD22295.1| 683|Homo sapiens cytoskeleton associated
protein 2 protein.
Length = 683
Score = 29.9 bits (64), Expect = 7.0
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +2
Query: 134 DRLDGKAPIVREPERESIRADVDNRIKSALHDMETPNDELSTS 262
++L+ ++ + R + + DN+ K HD++TPN E TS
Sbjct: 545 EKLEMESKLHRNLLFQDCEKEQDNKTKDPTHDVKTPNTETRTS 587
>AF177227-1|AAG33675.1| 572|Homo sapiens CTCL tumor antigen se20-10
protein.
Length = 572
Score = 29.9 bits (64), Expect = 7.0
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +2
Query: 134 DRLDGKAPIVREPERESIRADVDNRIKSALHDMETPNDELSTS 262
++L+ ++ + R + + DN+ K HD++TPN E TS
Sbjct: 508 EKLEMESKLHRNLLFQDCEKEQDNKTKDPTHDVKTPNTETRTS 550
>AK124238-1|BAC85814.1| 137|Homo sapiens protein ( Homo sapiens
cDNA FLJ42244 fis, clone TKIDN2005934. ).
Length = 137
Score = 29.5 bits (63), Expect = 9.3
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 171 PNAKVFELMSTTASRAPCTTWKHPTMN-CRLQRCTRPAG 284
P +V + S T++RAP +W HP + C L PAG
Sbjct: 64 PPVQVAQAQSPTSARAPQGSWAHPNSSVCPLWPPPPPAG 102
>AK022982-1|BAB14345.1| 682|Homo sapiens protein ( Homo sapiens
cDNA FLJ12920 fis, clone NT2RP2004594. ).
Length = 682
Score = 29.5 bits (63), Expect = 9.3
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +2
Query: 134 DRLDGKAPIVREPERESIRADVDNRIKSALHDMETPNDELSTS 262
++L+ ++ + R + + DN+ K HD +TPN E TS
Sbjct: 544 EKLEMESKLHRNLLLQDCEKEQDNKTKDPTHDAKTPNTETRTS 586
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,830,448
Number of Sequences: 237096
Number of extensions: 1644987
Number of successful extensions: 4200
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4048
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4200
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6211568660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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