Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0561
         (591 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U64844-11|AAB18311.1|  482|Caenorhabditis elegans Hypothetical p...    29   1.9  
AF130407-1|AAD42308.1|  632|Caenorhabditis elegans phophoinositi...    29   3.3  
AF130406-1|AAD42307.1|  636|Caenorhabditis elegans phophoinositi...    29   3.3  
AF026207-4|AAK82904.1|  632|Caenorhabditis elegans Pdk-class pro...    29   3.3  
AF026207-3|AAK82905.1|  636|Caenorhabditis elegans Pdk-class pro...    29   3.3  
AL021447-2|CAA16273.2|  807|Caenorhabditis elegans Hypothetical ...    28   4.3  
AF016439-4|AAV28339.1|  489|Caenorhabditis elegans Hypothetical ...    28   5.7  
AF016439-3|AAB65899.2|  467|Caenorhabditis elegans Hypothetical ...    28   5.7  
Z75711-11|CAB00038.1|  755|Caenorhabditis elegans Hypothetical p...    27   7.5  
Z75710-10|CAB00029.1|  755|Caenorhabditis elegans Hypothetical p...    27   7.5  
Z70753-5|CAB54240.1|  910|Caenorhabditis elegans Hypothetical pr...    27   10.0 
Z70753-4|CAA94764.1|  924|Caenorhabditis elegans Hypothetical pr...    27   10.0 
U64857-15|AAC25858.1|  470|Caenorhabditis elegans Hypothetical p...    27   10.0 
U00052-8|AAK21421.2|  707|Caenorhabditis elegans Hypothetical pr...    27   10.0 
U00032-8|AAA50632.2| 1163|Caenorhabditis elegans Hypothetical pr...    27   10.0 

>U64844-11|AAB18311.1|  482|Caenorhabditis elegans Hypothetical
           protein T22F3.8 protein.
          Length = 482

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = -2

Query: 539 WRCAFLCVLRFLQSTSGAADF 477
           W  AFL +LRF+Q  S +ADF
Sbjct: 145 WNFAFLIILRFIQGFSFSADF 165


>AF130407-1|AAD42308.1|  632|Caenorhabditis elegans
           phophoinositide-dependent proteinkinase 1b protein.
          Length = 632

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -2

Query: 452 EYFVRNPHSVFEIGNAVLKVDVISEPRSLFLARRRF 345
           E  V+NP  +F   + +LK   + + R LF  RR F
Sbjct: 460 EQRVKNPFHIFTNNSLILKQGYLEKKRGLFARRRMF 495


>AF130406-1|AAD42307.1|  636|Caenorhabditis elegans
           phophoinositide-dependent proteinkinase 1a protein.
          Length = 636

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -2

Query: 452 EYFVRNPHSVFEIGNAVLKVDVISEPRSLFLARRRF 345
           E  V+NP  +F   + +LK   + + R LF  RR F
Sbjct: 464 EQRVKNPFHIFTNNSLILKQGYLEKKRGLFARRRMF 499


>AF026207-4|AAK82904.1|  632|Caenorhabditis elegans Pdk-class
           protein kinase protein1, isoform a protein.
          Length = 632

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -2

Query: 452 EYFVRNPHSVFEIGNAVLKVDVISEPRSLFLARRRF 345
           E  V+NP  +F   + +LK   + + R LF  RR F
Sbjct: 460 EQRVKNPFHIFTNNSLILKQGYLEKKRGLFARRRMF 495


>AF026207-3|AAK82905.1|  636|Caenorhabditis elegans Pdk-class
           protein kinase protein1, isoform b protein.
          Length = 636

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -2

Query: 452 EYFVRNPHSVFEIGNAVLKVDVISEPRSLFLARRRF 345
           E  V+NP  +F   + +LK   + + R LF  RR F
Sbjct: 464 EQRVKNPFHIFTNNSLILKQGYLEKKRGLFARRRMF 499


>AL021447-2|CAA16273.2|  807|Caenorhabditis elegans Hypothetical
           protein F19B2.6 protein.
          Length = 807

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 14/56 (25%), Positives = 29/56 (51%)
 Frame = +3

Query: 342 VETPARQKKTSRFADDIDFENSVANLENRMRISDKILESVGIGHSEVSSARRALQE 509
           V   + +KKT R  + ++   S+   ++ ++ S K  E V I H+ + S+  + +E
Sbjct: 544 VSVESIRKKTKRAKNKLEARKSLQKKKDDLKASRKSWEEVKINHNNILSSNNSNEE 599


>AF016439-4|AAV28339.1|  489|Caenorhabditis elegans Hypothetical
           protein R02F11.3b protein.
          Length = 489

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 15/56 (26%), Positives = 29/56 (51%)
 Frame = +2

Query: 170 PERESIRADVDNRIKSALHDMETPNDELSTSEVHAPSGADLSLLPWKTMNLTKTSQ 337
           P R S+R+   ++  SA  D+E  N + S +E+H  +    + L  ++ N  K ++
Sbjct: 28  PGRPSLRSISLSQAPSAPRDLENGNGQTSCAELHKLTAGSTTSLSSQSKNAKKVNK 83


>AF016439-3|AAB65899.2|  467|Caenorhabditis elegans Hypothetical
           protein R02F11.3a protein.
          Length = 467

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 15/56 (26%), Positives = 29/56 (51%)
 Frame = +2

Query: 170 PERESIRADVDNRIKSALHDMETPNDELSTSEVHAPSGADLSLLPWKTMNLTKTSQ 337
           P R S+R+   ++  SA  D+E  N + S +E+H  +    + L  ++ N  K ++
Sbjct: 28  PGRPSLRSISLSQAPSAPRDLENGNGQTSCAELHKLTAGSTTSLSSQSKNAKKVNK 83


>Z75711-11|CAB00038.1|  755|Caenorhabditis elegans Hypothetical
           protein D1081.8 protein.
          Length = 755

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 22/97 (22%), Positives = 38/97 (39%)
 Frame = +2

Query: 26  QGTENKAR*AVLEEQGVPASTTANYNKGESYYRPVLDRLDGKAPIVREPERESIRADVDN 205
           +  EN+ R   +  Q +  S        E   R      D    +V+    + +  DVDN
Sbjct: 509 RNAENRVRNMKMRSQVIQRSLPKPTKVNEQATRATNSSADD---MVKAEMSKLLAWDVDN 565

Query: 206 RIKSALHDMETPNDELSTSEVHAPSGADLSLLPWKTM 316
           +  S ++  E  +      +  A SG +L+ L WK +
Sbjct: 566 KPPSVIYSREELDAAADLIKQEAESGPELNSLMWKVV 602


>Z75710-10|CAB00029.1|  755|Caenorhabditis elegans Hypothetical
           protein D1081.8 protein.
          Length = 755

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 22/97 (22%), Positives = 38/97 (39%)
 Frame = +2

Query: 26  QGTENKAR*AVLEEQGVPASTTANYNKGESYYRPVLDRLDGKAPIVREPERESIRADVDN 205
           +  EN+ R   +  Q +  S        E   R      D    +V+    + +  DVDN
Sbjct: 509 RNAENRVRNMKMRSQVIQRSLPKPTKVNEQATRATNSSADD---MVKAEMSKLLAWDVDN 565

Query: 206 RIKSALHDMETPNDELSTSEVHAPSGADLSLLPWKTM 316
           +  S ++  E  +      +  A SG +L+ L WK +
Sbjct: 566 KPPSVIYSREELDAAADLIKQEAESGPELNSLMWKVV 602


>Z70753-5|CAB54240.1|  910|Caenorhabditis elegans Hypothetical
           protein F40F9.6b protein.
          Length = 910

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 12/30 (40%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
 Frame = -2

Query: 506 LQSTSGAAD-FRVTNPDAFEYFVRNPHSVF 420
           L++T G +D +R+ N D FEY + NP +++
Sbjct: 226 LRNTVGNSDPYRLYNLDVFEYELNNPMALY 255


>Z70753-4|CAA94764.1|  924|Caenorhabditis elegans Hypothetical
           protein F40F9.6a protein.
          Length = 924

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 12/30 (40%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
 Frame = -2

Query: 506 LQSTSGAAD-FRVTNPDAFEYFVRNPHSVF 420
           L++T G +D +R+ N D FEY + NP +++
Sbjct: 240 LRNTVGNSDPYRLYNLDVFEYELNNPMALY 269


>U64857-15|AAC25858.1|  470|Caenorhabditis elegans Hypothetical
           protein C37C3.1 protein.
          Length = 470

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 29/68 (42%), Positives = 34/68 (50%), Gaps = 11/68 (16%)
 Frame = -1

Query: 291 RSAPLGACT-SEVDSSSLGVSMSCRALLMRLSTS---------ARILSRSGSRTIGALPS 142
           RS+PL A   S   S+S   S+S R  L   S S         +R LSRSGSRT     S
Sbjct: 273 RSSPLRAAEISRRKSTSHSTSLSKRRYLRSRSRSLSKSPARRRSRHLSRSGSRTPAQRHS 332

Query: 141 KRS-STGR 121
           +RS ST R
Sbjct: 333 RRSESTSR 340


>U00052-8|AAK21421.2|  707|Caenorhabditis elegans Hypothetical
           protein K02F3.2 protein.
          Length = 707

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = -1

Query: 387 HQRTSKSFSGAQAFQRFCDVFVKFIVFQG 301
           +QRTS SF G   ++   D F K + F+G
Sbjct: 399 NQRTSGSFVGEVMYKNSLDCFKKVVKFEG 427


>U00032-8|AAA50632.2| 1163|Caenorhabditis elegans Hypothetical
           protein F37A4.4 protein.
          Length = 1163

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 17/64 (26%), Positives = 26/64 (40%)
 Frame = +3

Query: 387 DIDFENSVANLENRMRISDKILESVGIGHSEVSSARRALQETKNAQKSASPGDSKIIRSR 566
           DID+    ANL+N   +  K+LE+  +     S + RA   + +                
Sbjct: 538 DIDYSTLKANLDNFFELKKKMLETEKLVKGFTSRSARAASNSGSPVLKIKDSQKHADHLG 597

Query: 567 NGLL 578
           NGLL
Sbjct: 598 NGLL 601


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,505,311
Number of Sequences: 27780
Number of extensions: 269691
Number of successful extensions: 914
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 875
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 914
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1247656244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)