Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0560
         (655 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein ...    27   0.16 
AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein ...    27   0.16 
AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific pro...    27   0.16 
DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein ...    26   0.28 
AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein ...    26   0.28 
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          25   0.84 
DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein ...    23   3.4  
AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein ...    23   3.4  

>DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein 3
           protein.
          Length = 130

 Score = 27.1 bits (57), Expect = 0.16
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -2

Query: 366 KVVTYLKDNFPSLWNSINRLYMP 298
           KV+ +L +N P LW+S+   Y P
Sbjct: 89  KVIKFLVENKPELWDSLANKYDP 111


>AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein
           protein.
          Length = 130

 Score = 27.1 bits (57), Expect = 0.16
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -2

Query: 366 KVVTYLKDNFPSLWNSINRLYMP 298
           KV+ +L +N P LW+S+   Y P
Sbjct: 89  KVIKFLVENKPELWDSLANKYDP 111


>AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific
           protein 3c precursor protein.
          Length = 130

 Score = 27.1 bits (57), Expect = 0.16
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -2

Query: 366 KVVTYLKDNFPSLWNSINRLYMP 298
           KV+ +L +N P LW+S+   Y P
Sbjct: 89  KVIKFLVENKPELWDSLANKYDP 111


>DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein 4
           protein.
          Length = 128

 Score = 26.2 bits (55), Expect = 0.28
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -2

Query: 366 KVVTYLKDNFPSLWNSINRLYMPRG 292
           KVV +L DN P +W  +   Y P G
Sbjct: 88  KVVQFLIDNKPEIWVLLEAKYDPTG 112


>AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein
           protein.
          Length = 128

 Score = 26.2 bits (55), Expect = 0.28
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -2

Query: 366 KVVTYLKDNFPSLWNSINRLYMPRG 292
           KVV +L DN P +W  +   Y P G
Sbjct: 88  KVVQFLIDNKPEIWVLLEAKYDPTG 112


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 24.6 bits (51), Expect = 0.84
 Identities = 14/42 (33%), Positives = 18/42 (42%)
 Frame = +2

Query: 407 ESYHYYMWNEFFKHIDIEPSNAHVLDGNASDLVLSVNALRNS 532
           ES   Y W     HID +P +    +  A  +VL     RNS
Sbjct: 183 ESNENYNWEHKETHIDWQPEDEECTEATAGAVVLE-TCQRNS 223


>DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein 6
           protein.
          Length = 125

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = -2

Query: 366 KVVTYLKDNFPSLWNSINRLYMPRG 292
           KVV YLK   P  W  ++  Y   G
Sbjct: 85  KVVNYLKTKRPKDWERLSAKYDSTG 109


>AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein
           protein.
          Length = 125

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = -2

Query: 366 KVVTYLKDNFPSLWNSINRLYMPRG 292
           KVV YLK   P  W  ++  Y   G
Sbjct: 85  KVVNYLKTKRPKDWERLSAKYDSTG 109


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,164
Number of Sequences: 438
Number of extensions: 4222
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)