Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0559
(596 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precur... 49 3e-08
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 25 0.56
AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor typ... 23 1.7
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 23 3.0
S76959-1|AAB33934.1| 85|Apis mellifera olfactory receptor prot... 22 5.3
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 22 5.3
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 21 9.2
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 21 9.2
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 21 9.2
>AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precursor
protein.
Length = 405
Score = 49.2 bits (112), Expect = 3e-08
Identities = 24/64 (37%), Positives = 39/64 (60%)
Frame = +2
Query: 65 NPQRIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHCPYGDATGRW 244
NP RI+GG+ T IN++P +A + T+ + CG I+++R +L+AAHC + T +
Sbjct: 157 NPSRIVGGTNTGINEFPMMAGIKRTY---EPGMICGATIISKRYVLTAAHCIIDENTTKL 213
Query: 245 RIRV 256
I V
Sbjct: 214 AIVV 217
Score = 40.7 bits (91), Expect = 1e-05
Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Frame = +1
Query: 283 VVHNVNRIIIHPNYNRRTAD----SDLCILRSNSNIAYNNNVRPINIAGANY-NLGDNQV 447
V+H++N++IIHP Y+ D +D+ +L++ +I + + V P + ++ +
Sbjct: 232 VLHSINKVIIHPKYDIIEKDDWQINDIALLKTEKDIKFGDKVGPACLPFQHFLDSFAGSD 291
Query: 448 VWAAGWGATSLGGSNSEQLR 507
V GWG TS G S L+
Sbjct: 292 VTVLGWGHTSFNGMLSHILQ 311
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 25.0 bits (52), Expect = 0.56
Identities = 26/81 (32%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
Frame = -3
Query: 459 SSPNNLVITKIVIGTSNINRTNVVVISYVGITA*DAEVTVSSTSV--IVGMND--NSVHV 292
++ ++V+T + T+ IN VIS G T + SSTS+ I D N V
Sbjct: 825 TTEQSVVVTNV---TTTINTPTTSVISMSGTTVPITSLPASSTSINSITVEKDVINDVKT 881
Query: 291 MHNTPTVGKGGTTRIRQRPVA 229
T T K T I +PVA
Sbjct: 882 QITTNTPAK-KATNIGGKPVA 901
>AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor type
D2 protein.
Length = 456
Score = 23.4 bits (48), Expect = 1.7
Identities = 19/74 (25%), Positives = 31/74 (41%), Gaps = 5/74 (6%)
Frame = +1
Query: 382 YNNNVRPINIAGANYNLGDNQVVWAAGWGATSL-----GGSNSEQLRPSRSGPSIRMPAS 546
Y R I + LG QV+ A+G +L GG+N++ R+ S
Sbjct: 226 YYKIYRAAVIQTKSLKLGTKQVLMASGELELTLRIHRGGGTNTDARHLFRTASSTPEDLQ 285
Query: 547 NVTDPLTVLSPLTC 588
++ +PLT + C
Sbjct: 286 DLEEPLTTIQHNNC 299
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 22.6 bits (46), Expect = 3.0
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +3
Query: 501 TPSVQVWTINQNAC 542
TP QV TI QNAC
Sbjct: 472 TPGPQVETILQNAC 485
>S76959-1|AAB33934.1| 85|Apis mellifera olfactory receptor
protein.
Length = 85
Score = 21.8 bits (44), Expect = 5.3
Identities = 8/29 (27%), Positives = 19/29 (65%)
Frame = -3
Query: 462 TSSPNNLVITKIVIGTSNINRTNVVVISY 376
+S+ N ++ +++GT I + +++ISY
Sbjct: 2 SSTEANELVMSVIVGTVVIVSSLIILISY 30
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.8 bits (44), Expect = 5.3
Identities = 7/21 (33%), Positives = 12/21 (57%)
Frame = +2
Query: 101 INQYPGIAALLYTWNWNQWWQ 163
+ Y AA + TWN ++W+
Sbjct: 1178 LRPYLRTAAAILTWNEKRFWE 1198
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 21.0 bits (42), Expect = 9.2
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -2
Query: 55 SRHSSKPKGQQNN 17
+RHSSK Q NN
Sbjct: 432 ARHSSKSDNQNNN 444
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 21.0 bits (42), Expect = 9.2
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +1
Query: 364 SNSNIAYNNNVRPINIAGANYN 429
SN I NNN N NYN
Sbjct: 86 SNKTIHNNNNYNNNNYNNYNYN 107
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 21.0 bits (42), Expect = 9.2
Identities = 10/41 (24%), Positives = 21/41 (51%)
Frame = +1
Query: 283 VVHNVNRIIIHPNYNRRTADSDLCILRSNSNIAYNNNVRPI 405
++ +++ IH N N + ++ +N N YNNN + +
Sbjct: 314 IISSLSNKTIHNNNNYKYNYNNNNYNNNNYNNNYNNNCKKL 354
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,015
Number of Sequences: 438
Number of extensions: 4418
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17482179
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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