Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0558
         (725 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   7.7  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    21   7.7  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    21   7.7  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   7.7  

>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -1

Query: 74  SNNNEIPSVVIIVDSVETSLLFIE 3
           +NNNE+P  VI+  S  T   + E
Sbjct: 407 ANNNELPEHVIMWSSPLTESPYFE 430


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 6/20 (30%), Positives = 15/20 (75%)
 Frame = +3

Query: 156 GLMTYNRAFNILSFLENETE 215
           G +TY+  F+++SF +++ +
Sbjct: 66  GALTYHAIFDLISFKDSDLQ 85


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 6/20 (30%), Positives = 15/20 (75%)
 Frame = +3

Query: 156 GLMTYNRAFNILSFLENETE 215
           G +TY+  F+++SF +++ +
Sbjct: 66  GALTYHAIFDLISFKDSDLQ 85


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -3

Query: 636 SMRSAAKDPEDLNLFSVYIVALES 565
           S+  AA   E+LNL ++ +  LES
Sbjct: 532 SLLGAANQLEELNLKNIDLTVLES 555


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,677
Number of Sequences: 336
Number of extensions: 3247
Number of successful extensions: 14
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19363530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)