Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0556
         (687 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    23   1.8  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    23   1.8  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    23   1.8  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    23   3.1  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    23   3.1  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   7.2  

>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +3

Query: 171 GSILTRNAILSAASCFYTGNNAHDAVLWGPE 263
           G+++     LS  + F  GN   +   WGPE
Sbjct: 258 GTVIEFQYGLSLGNAFQGGNQLANLANWGPE 288


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +3

Query: 171 GSILTRNAILSAASCFYTGNNAHDAVLWGPE 263
           G+++     LS  + F  GN   +   WGPE
Sbjct: 259 GTVIEFQYGLSLGNAFQGGNQLANLANWGPE 289


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +3

Query: 171 GSILTRNAILSAASCFYTGNNAHDAVLWGPE 263
           G+++     LS  + F  GN   +   WGPE
Sbjct: 259 GTVIEFQYGLSLGNAFQGGNQLANLANWGPE 289


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +3

Query: 153 FTHRCGGSILTRNAILSAASCF 218
           F+++CG      N ++SA  CF
Sbjct: 150 FSYKCGIQYHICNTVISATVCF 171


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +3

Query: 153 FTHRCGGSILTRNAILSAASCF 218
           F+++CG      N ++SA  CF
Sbjct: 146 FSYKCGIQYHICNTVISATVCF 167


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +3

Query: 363 PFSGPDSTFSSW 398
           P+S P  T+S+W
Sbjct: 296 PYSAPGPTYSTW 307


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,374
Number of Sequences: 336
Number of extensions: 4163
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)