Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0556
(687 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 2e-04
SB_25649| Best HMM Match : Trypsin (HMM E-Value=0) 44 2e-04
SB_43527| Best HMM Match : Trypsin (HMM E-Value=0) 41 0.001
SB_35844| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 40 0.002
SB_33589| Best HMM Match : Trypsin (HMM E-Value=0) 38 0.006
SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.006
SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44) 37 0.018
SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.023
SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0) 36 0.023
SB_22567| Best HMM Match : Trypsin (HMM E-Value=6.6e-30) 36 0.023
SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.023
SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 36 0.031
SB_21033| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.031
SB_35182| Best HMM Match : CUB (HMM E-Value=0) 36 0.031
SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.031
SB_4906| Best HMM Match : Trypsin (HMM E-Value=0) 36 0.031
SB_51536| Best HMM Match : Trypsin (HMM E-Value=0) 36 0.041
SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.094
SB_28897| Best HMM Match : Trypsin (HMM E-Value=0) 34 0.12
SB_42238| Best HMM Match : Trypsin (HMM E-Value=0) 33 0.16
SB_55505| Best HMM Match : Trypsin (HMM E-Value=0) 33 0.16
SB_29414| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_10167| Best HMM Match : Trypsin (HMM E-Value=0) 33 0.22
SB_21521| Best HMM Match : Trypsin (HMM E-Value=1.7e-23) 33 0.29
SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22) 33 0.29
SB_10942| Best HMM Match : PDZ (HMM E-Value=2.3e-08) 32 0.38
SB_1442| Best HMM Match : SRCR (HMM E-Value=0) 31 0.66
SB_21520| Best HMM Match : Trypsin (HMM E-Value=0) 31 1.2
SB_1192| Best HMM Match : Trypsin (HMM E-Value=3.9e-23) 30 1.5
SB_20791| Best HMM Match : Trypsin (HMM E-Value=4.8e-12) 30 2.0
SB_48467| Best HMM Match : F5_F8_type_C (HMM E-Value=1.4e-21) 30 2.0
SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0) 30 2.0
SB_33775| Best HMM Match : Trypsin (HMM E-Value=0.012) 30 2.0
SB_21575| Best HMM Match : Trypsin (HMM E-Value=0) 30 2.0
SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_50961| Best HMM Match : Trypsin (HMM E-Value=0) 29 2.7
SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_17195| Best HMM Match : Trypsin (HMM E-Value=4.9e-06) 29 2.7
SB_56478| Best HMM Match : Trypsin (HMM E-Value=0) 29 3.5
SB_34025| Best HMM Match : Homeobox (HMM E-Value=1.1e-35) 29 3.5
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_22253| Best HMM Match : Pkinase (HMM E-Value=0) 29 4.7
SB_10327| Best HMM Match : Trypsin (HMM E-Value=0) 29 4.7
SB_46027| Best HMM Match : Fibrinogen_C (HMM E-Value=0.24) 29 4.7
SB_20652| Best HMM Match : OmpH (HMM E-Value=1.9) 28 6.2
SB_10273| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_59706| Best HMM Match : Trypsin (HMM E-Value=0.16) 28 6.2
SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35) 28 8.1
SB_17890| Best HMM Match : Trypsin (HMM E-Value=3.2) 28 8.1
SB_11235| Best HMM Match : Trypsin (HMM E-Value=1.1e-08) 28 8.1
SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
>SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 43.6 bits (98), Expect = 2e-04
Identities = 32/92 (34%), Positives = 42/92 (45%)
Frame = +3
Query: 18 TLFFLYVSAVSATDDPSQRIGGGTLVPITSYPFATALLNNPGSGVFTHRCGGSILTRNAI 197
TL FL SA RI GGT PI +P+ LL +P F CGGS++ +
Sbjct: 12 TLPFL-CSAECGVKPGGSRIVGGTEAPINGWPWQAMLLRSPNGDQF---CGGSLIDPGWV 67
Query: 198 LSAASCFYTGNNAHDAVLWGPELAQPTVILEE 293
L+AA C G A+L + TV E+
Sbjct: 68 LTAAHCL-VGEQPDSALLGAHYRSNKTVGTEK 98
>SB_25649| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 718
Score = 43.6 bits (98), Expect = 2e-04
Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +3
Query: 63 PSQRIGGGTLVPITSYPFATAL-LNNPGSGVFTHRCGGSILTRNAILSAASCFYTGNN 233
P RI GG P S+P+ + L P + TH CGGS++ IL+++ CF+T NN
Sbjct: 242 PESRIVGGREAPRNSWPWQVEIILKTPN--LTTHYCGGSLIDPYWILTSSHCFWTYNN 297
>SB_43527| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 366
Score = 40.7 bits (91), Expect = 0.001
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +1
Query: 466 SDWMGSRIFNRSSVSIQLRRTVIWVVDQQICSNRDSELGFTVASNMVCLGWLDVGVRGQC 645
S W G R R V+ +L + +VD Q C R + + V +NM C G+ + C
Sbjct: 250 SGW-GKRKLWRDRVANRLHEATVPIVDIQTC--RKAHPDYIVTANMFCAGFENSSRGDAC 306
Query: 646 QGDNGSPI-LDN 678
QGD+G P +DN
Sbjct: 307 QGDSGGPFSVDN 318
>SB_35844| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 249
Score = 39.5 bits (88), Expect = 0.002
Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 4/74 (5%)
Frame = +3
Query: 69 QRIGGGTLVPITSYPFATALLNNPGSGVFTHRCGGSILTRNAILSAASC-FYTGNNAHDA 245
+R+ G+ V S+P+ LL + G F H+CGG+++ R +++AA C F + +H
Sbjct: 42 KRVVSGSEVEPQSWPWQVHLLQSR-DGSFLHKCGGALIDREWVVTAAHCVFQEPDVSHYK 100
Query: 246 VLWGP---ELAQPT 278
V+ G ++ +PT
Sbjct: 101 VILGDFNRDIKEPT 114
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Frame = +1
Query: 508 SIQLRRTVIWVVDQQICSNRDSELGFTVASNMVCLGWLD----VGVRGQCQGDNGSPIL 672
S+ LR + +V Q+ C+N +S ++M+C G+ + + C GD+G P +
Sbjct: 187 SVTLREAQLPIVGQKECNNSNSWFHIVDETSMLCAGYGENRGNLSKISGCNGDSGGPFV 245
>SB_33589| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 289
Score = 38.3 bits (85), Expect = 0.006
Identities = 22/75 (29%), Positives = 37/75 (49%)
Frame = +3
Query: 69 QRIGGGTLVPITSYPFATALLNNPGSGVFTHRCGGSILTRNAILSAASCFYTGNNAHDAV 248
+RI GG ++P+ ALL N T CGGS++ N +++A CF+ ++ D
Sbjct: 52 KRIVGGVEAAPGAWPWQVALLMNG-----TQFCGGSLVNENWVVTARHCFHELWSSMDTA 106
Query: 249 LWGPELAQPTVILEE 293
W L + ++ E
Sbjct: 107 SWTASLGEHHLVTSE 121
>SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 551
Score = 38.3 bits (85), Expect = 0.006
Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Frame = +3
Query: 15 ITLFFLYVSAVSA--TDDPSQRIGGGTLVPITSYPFATALLNNPGSGVFTHRCGGSILTR 188
I LF ++ +S +++P RI GGT +P+ +L + + HRCGG+++
Sbjct: 263 IRLFKVFCVTLSGFTSEEPMSRIIGGTTAAPHDWPWQAQILIHVDKS-WNHRCGGTLIDT 321
Query: 189 NAILSAASCFY 221
+++AA C +
Sbjct: 322 EWVVTAAHCVF 332
>SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44)
Length = 348
Score = 36.7 bits (81), Expect = 0.018
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +3
Query: 72 RIGGGTLVPITSYPFATALLNNPGSGVFTHRCGGSILTRNAILSAASCFYTGN 230
RI GG ++P+ + SG CGG+++ R +L+AA CFY N
Sbjct: 126 RIVGGNEAGHGTWPWQVGIYRFDHSGNQMQICGGALINREWVLTAAHCFYKTN 178
>SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 604
Score = 36.3 bits (80), Expect = 0.023
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +1
Query: 517 LRRTVIWVVDQQICSNRDSELGFTVASNMVCLGWLDVGVRGQCQGDNG 660
L+ T + +V+ +C+ + G++V NM C G G + CQGD+G
Sbjct: 263 LKETCMPIVNSHVCNQAFQDEGYSVTPNMFCAGQAS-GGKDICQGDSG 309
>SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0)
Length = 687
Score = 36.3 bits (80), Expect = 0.023
Identities = 22/67 (32%), Positives = 33/67 (49%)
Frame = +1
Query: 484 RIFNRSSVSIQLRRTVIWVVDQQICSNRDSELGFTVASNMVCLGWLDVGVRGQCQGDNGS 663
R+F S + L+ + V C ++ EL ++MVC G RG CQGD+G
Sbjct: 536 RVFEGSDEAEFLQEAELVVASNAKCDKKNGELLPVDDASMVCAGGPG---RGGCQGDSGG 592
Query: 664 PILDNGA 684
P++ N A
Sbjct: 593 PLVCNEA 599
>SB_22567| Best HMM Match : Trypsin (HMM E-Value=6.6e-30)
Length = 249
Score = 36.3 bits (80), Expect = 0.023
Identities = 22/67 (32%), Positives = 33/67 (49%)
Frame = +1
Query: 484 RIFNRSSVSIQLRRTVIWVVDQQICSNRDSELGFTVASNMVCLGWLDVGVRGQCQGDNGS 663
R+F S + L+ + V C ++ EL ++MVC G RG CQGD+G
Sbjct: 76 RVFEGSDEAEFLQEAELVVASNAKCDKKNGELLPVDDASMVCAGGPG---RGGCQGDSGG 132
Query: 664 PILDNGA 684
P++ N A
Sbjct: 133 PLVCNEA 139
>SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 36.3 bits (80), Expect = 0.023
Identities = 21/67 (31%), Positives = 33/67 (49%)
Frame = +3
Query: 63 PSQRIGGGTLVPITSYPFATALLNNPGSGVFTHRCGGSILTRNAILSAASCFYTGNNAHD 242
P RI GG+ P ++P+ L+ N G CGG+++T +++AA C N A
Sbjct: 627 PLSRIVGGSTAPPGAWPWQVMLIYNSGRQF----CGGTLVTPEWVITAAHCVVDKNPASI 682
Query: 243 AVLWGPE 263
V G +
Sbjct: 683 QVRLGAQ 689
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = +1
Query: 589 VASNMVCLGWLDVGVRGQCQGDNGSPIL 672
++++M+C G + GV CQGD+G P++
Sbjct: 795 ISADMICAGNPEGGV-DTCQGDSGGPLV 821
>SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 506
Score = 35.9 bits (79), Expect = 0.031
Identities = 19/48 (39%), Positives = 28/48 (58%)
Frame = +3
Query: 72 RIGGGTLVPITSYPFATALLNNPGSGVFTHRCGGSILTRNAILSAASC 215
RI GGT P+ +P+ A+L + G F CGGS++ +L+AA C
Sbjct: 259 RIVGGTEAPVNGWPWQ-AMLRSAGGSQF---CGGSLIHPEWVLTAAHC 302
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +1
Query: 589 VASNMVCLGWLDVGVRGQCQGDNGSPIL 672
+ +M+C G LD G CQGD+G P++
Sbjct: 115 IHDSMLCAG-LDAGGIDACQGDSGGPLV 141
>SB_21033| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 246
Score = 35.9 bits (79), Expect = 0.031
Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
Frame = +2
Query: 242 CGLVGARV-GSAYSNSGGTMYIISRITPHTSFSPTTRANDIAVLRTRFNIQFVAGLVEAA 418
C + A+ G+ Y G IS+IT H FS T +DIA+LR + + V
Sbjct: 12 CAFLSAQTKGAHYREHDGKELTISKITYHPGFSFATADHDIAILRLSAPV-LLTSSVNTI 70
Query: 419 GLVGRTYTFSNDQAVEAIGWGAVSSTD 499
L + S GWG ++S+D
Sbjct: 71 CLPSQGARASLGGNCFISGWGRINSSD 97
>SB_35182| Best HMM Match : CUB (HMM E-Value=0)
Length = 963
Score = 35.9 bits (79), Expect = 0.031
Identities = 23/69 (33%), Positives = 34/69 (49%)
Frame = +1
Query: 466 SDWMGSRIFNRSSVSIQLRRTVIWVVDQQICSNRDSELGFTVASNMVCLGWLDVGVRGQC 645
S W G+ S S L + + +V + CS++ S G + NM+C G GV C
Sbjct: 350 SGW-GALQEGAGSTSKVLMQAKVPLVSRDQCSHQQS-YGDRITENMLCAGMRQGGV-DSC 406
Query: 646 QGDNGSPIL 672
QGD+G P +
Sbjct: 407 QGDSGGPFV 415
>SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 330
Score = 35.9 bits (79), Expect = 0.031
Identities = 20/53 (37%), Positives = 30/53 (56%)
Frame = +3
Query: 63 PSQRIGGGTLVPITSYPFATALLNNPGSGVFTHRCGGSILTRNAILSAASCFY 221
P RI GGT P ++P+ L +N G G F CGG+++ +++AA C Y
Sbjct: 136 PHTRIVGGTKAPPGAWPWQAMLRSNYG-GQF---CGGTLVHPQWVITAAHCVY 184
>SB_4906| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 530
Score = 35.9 bits (79), Expect = 0.031
Identities = 19/48 (39%), Positives = 28/48 (58%)
Frame = +3
Query: 72 RIGGGTLVPITSYPFATALLNNPGSGVFTHRCGGSILTRNAILSAASC 215
RI GGT P+ +P+ A+L + G F CGGS++ +L+AA C
Sbjct: 219 RIVGGTEAPVNGWPWQ-AMLRSAGGSQF---CGGSLIHPEWVLTAAHC 262
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +1
Query: 589 VASNMVCLGWLDVGVRGQCQGDNGSPIL 672
+ +M+C G LD G CQGD+G P++
Sbjct: 459 IHDSMLCAG-LDAGGIDACQGDSGGPLV 485
>SB_51536| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 347
Score = 35.5 bits (78), Expect = 0.041
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = +1
Query: 517 LRRTVIWVVDQQICSNRDSELGFTVASNMVCLGWLDVGVRGQCQGDNGSPIL 672
L + + +V + C ++L + V+S M C G+ G+ CQGD+G P++
Sbjct: 252 LHQAAVPLVSRDTCQKAYNDLHYKVSSRMRCAGYGAGGIDA-CQGDSGGPLV 302
Score = 31.5 bits (68), Expect = 0.66
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +3
Query: 72 RIGGGTLVPITSYPFATALLNNPGSGVFT-HRCGGSILTRNAILSAASCFYTGNNAHD 242
RI GGT ++P+ ++ T H CGGS++ I++AA CF +A D
Sbjct: 103 RIVGGTRAKKGAWPWQISMNYVHNKVTKTPHICGGSVVAPEWIVTAAHCFAYSKDAKD 160
>SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1870
Score = 34.3 bits (75), Expect = 0.094
Identities = 20/65 (30%), Positives = 32/65 (49%)
Frame = +1
Query: 490 FNRSSVSIQLRRTVIWVVDQQICSNRDSELGFTVASNMVCLGWLDVGVRGQCQGDNGSPI 669
+NR S+ L+ ++ +V QQ C+ G V S M+C G+ C GD+G P
Sbjct: 1466 YNRPGASV-LQEAMMPIVSQQTCAAAMRRWG-VVTSRMICGGFGAGSTISGCFGDSGGPF 1523
Query: 670 LDNGA 684
+ G+
Sbjct: 1524 VCQGS 1528
>SB_28897| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 974
Score = 33.9 bits (74), Expect = 0.12
Identities = 19/56 (33%), Positives = 31/56 (55%)
Frame = +3
Query: 54 TDDPSQRIGGGTLVPITSYPFATALLNNPGSGVFTHRCGGSILTRNAILSAASCFY 221
+ D RI GG ++P+ A+ G F RCGG+++ R+ +++AA CFY
Sbjct: 717 SSDKRFRIVGGREAKAGAWPWLAAIYVK---GSF--RCGGALIARDWVVTAAHCFY 767
Score = 27.9 bits (59), Expect = 8.1
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +1
Query: 529 VIWVVDQQICSNRDSELGFT--VASNMVCLGWLDVGVRGQCQGDNGSPIL 672
V+ V S+R ++ T + M C G + +G R C+GD+GSPI+
Sbjct: 874 VLKQVQLPFVSHRVCQVNHTNAITKRMRCAGDV-MGERDACKGDSGSPIV 922
>SB_42238| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 657
Score = 33.5 bits (73), Expect = 0.16
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +3
Query: 156 THRCGGSILTRNAILSAASCFYTGNN 233
TH CGGS++ IL+++ CF+T NN
Sbjct: 12 THYCGGSLIDPYWILTSSHCFWTYNN 37
Score = 33.1 bits (72), Expect = 0.22
Identities = 19/62 (30%), Positives = 31/62 (50%)
Frame = +1
Query: 499 SSVSIQLRRTVIWVVDQQICSNRDSELGFTVASNMVCLGWLDVGVRGQCQGDNGSPILDN 678
S S L + +V +++C+ DS G T+ C G+ G R C GD+G P++ +
Sbjct: 130 SPYSPVLNELEVDIVSKEVCNANDSYNG-TINDRYFCAGFPQGG-RDSCGGDSGGPLVCS 187
Query: 679 GA 684
A
Sbjct: 188 NA 189
Score = 32.3 bits (70), Expect = 0.38
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = +3
Query: 63 PSQRIGGGTLVPITSYPFATALLNNPGSGVFTHRCGGSILTRNAILSAASCF 218
P RI GG S+P+ L+ N G+ H CGGS++ + ++++ CF
Sbjct: 246 PQPRIVGGREASPNSWPWQVDLVVN-GT---RHNCGGSLIDKQWVVTSGHCF 293
>SB_55505| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 292
Score = 33.5 bits (73), Expect = 0.16
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = +3
Query: 33 YVSAVSATDDPSQRIGGGTLVPITSYPFATALLNNPGSGVFTHRCGGSILTRNAILSAAS 212
+V S+T +RI GG I +P+ A++ + CGGS++ + I++AA
Sbjct: 27 FVPPSSSTASACRRIMGGQRSTIEQHPWMVAMMLDSAQA-----CGGSLVPEDWIVTAAH 81
Query: 213 CF 218
CF
Sbjct: 82 CF 83
>SB_29414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 72
Score = 33.1 bits (72), Expect = 0.22
Identities = 19/50 (38%), Positives = 28/50 (56%)
Frame = +3
Query: 69 QRIGGGTLVPITSYPFATALLNNPGSGVFTHRCGGSILTRNAILSAASCF 218
+RI GG ++P+ AL N G HRCGGS++ +++AA CF
Sbjct: 25 RRIVGGIESANGAWPWQAALFLN---GTH-HRCGGSVIKSQWVVTAAHCF 70
>SB_10167| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 532
Score = 33.1 bits (72), Expect = 0.22
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 517 LRRTVIWVVDQQICSNRDSELGFTVASNMVCLGWLDVGVRGQCQGDNGSPILDN 678
L++ ++ V C ++S L +M+C G + +G CQGD+G P + N
Sbjct: 215 LQQAMLPVASHSACDRKNSYLVPVEEKSMICAGGMGMG---GCQGDSGGPFVCN 265
>SB_21521| Best HMM Match : Trypsin (HMM E-Value=1.7e-23)
Length = 299
Score = 32.7 bits (71), Expect = 0.29
Identities = 23/68 (33%), Positives = 35/68 (51%)
Frame = +3
Query: 39 SAVSATDDPSQRIGGGTLVPITSYPFATALLNNPGSGVFTHRCGGSILTRNAILSAASCF 218
S+ D + +GG VP S+P+ ++ GS H CGGS+L+ +L+AA C
Sbjct: 20 SSCGRRPDGVRIVGGDEAVP-HSWPWQVSI-RLKGS----HICGGSLLSPLWLLTAAHCV 73
Query: 219 YTGNNAHD 242
NN+ D
Sbjct: 74 IRSNNSAD 81
>SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22)
Length = 231
Score = 32.7 bits (71), Expect = 0.29
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Frame = +3
Query: 66 SQRIGGGTLVPITSYPFATALLNNPGSGVFTHRCGGSILTRNAILSAASC--FYTGNNAH 239
S R+ G P ++P+ +L N H CGGS++T +L+AA C Y A+
Sbjct: 35 SSRVVNGANAPQHAWPWQISLRTNG-----QHICGGSLITPEWVLTAAHCVDHYPYPGAY 89
Query: 240 DAVL-WG 257
V+ WG
Sbjct: 90 TVVVGWG 96
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = +1
Query: 517 LRRTVIWVVDQQICSNRDSELGFTVASNMVCLGWLDVGVRGQCQGDNGSPILDN 678
L++ ++ V C R+++L +M+C G G CQGD+G P + N
Sbjct: 108 LQQAMLPVAYDNHCMQRNNQLMRVDPVSMICAGGQRAA--GGCQGDSGGPFVCN 159
>SB_10942| Best HMM Match : PDZ (HMM E-Value=2.3e-08)
Length = 386
Score = 32.3 bits (70), Expect = 0.38
Identities = 22/63 (34%), Positives = 31/63 (49%)
Frame = +3
Query: 63 PSQRIGGGTLVPITSYPFATALLNNPGSGVFTHRCGGSILTRNAILSAASCFYTGNNAHD 242
P RI GGT S+P+ L G F + CGGS++ IL+A C +G +A
Sbjct: 50 PHTRIVGGTAAKQNSWPWQAQLRTTSG---FPY-CGGSLIHPQWILTATHC-VSGKSASS 104
Query: 243 AVL 251
V+
Sbjct: 105 IVI 107
>SB_1442| Best HMM Match : SRCR (HMM E-Value=0)
Length = 2103
Score = 31.5 bits (68), Expect = 0.66
Identities = 22/69 (31%), Positives = 33/69 (47%)
Frame = +1
Query: 466 SDWMGSRIFNRSSVSIQLRRTVIWVVDQQICSNRDSELGFTVASNMVCLGWLDVGVRGQC 645
S W RI S S L+ I +VDQ+ C + L + + M C G +G C
Sbjct: 1915 SGW--GRIGESSPGSNVLQEASIPLVDQRACEEQYRNLK-PITARMRCAGIYGTP-KGTC 1970
Query: 646 QGDNGSPIL 672
+GD+G P++
Sbjct: 1971 KGDSGGPLV 1979
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +3
Query: 69 QRIGGGTLVPITSYPFATALLNNPGSGVFTHRCGGSILTRNAILSAASCFYT 224
Q+I GG + ++P+ + G H CGGSI+ I++AA C T
Sbjct: 1781 QQIVGGKVTEHGAWPWQVQI----GYKTMGHICGGSIVNSQWIVTAAHCVTT 1828
>SB_21520| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 800
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +3
Query: 159 HRCGGSILTRNAILSAASCFYTGNNAHD 242
H CGGS+L+ +L+AA C +N D
Sbjct: 338 HICGGSLLSSTWVLTAAHCVIRSHNTSD 365
>SB_1192| Best HMM Match : Trypsin (HMM E-Value=3.9e-23)
Length = 136
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +1
Query: 568 DSELGFTVASNMVCLGWLDVGVRGQCQGDNGSP-ILDNG 681
DS + +M+C G +D G CQGD+G P + +NG
Sbjct: 58 DSSYPNKIHDSMICAG-IDKGGIDACQGDSGGPMVCENG 95
>SB_20791| Best HMM Match : Trypsin (HMM E-Value=4.8e-12)
Length = 227
Score = 29.9 bits (64), Expect = 2.0
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = +3
Query: 24 FFLYVSAVSATDDPSQ-RIGGGTLVPITSYPFATALLNNPGSGVFTHRCGGSILTRNAIL 200
FF + PSQ R+ G ++P+ +L G H CGGS++ +L
Sbjct: 20 FFFREKNPACGQRPSQSRVINGVDATAHAWPWQISLRMMSKKGDDYHFCGGSLIDSEWVL 79
Query: 201 SAASC 215
+AA C
Sbjct: 80 TAAHC 84
>SB_48467| Best HMM Match : F5_F8_type_C (HMM E-Value=1.4e-21)
Length = 418
Score = 29.9 bits (64), Expect = 2.0
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = +3
Query: 66 SQRIGGGTLVPITSYPFATALLNNPGSGVFTHRCGGSILTRNAILSAASCFYTGNNA 236
+ I GGT + +P+ +L V CGG++LT +L+AA CF A
Sbjct: 255 TSNIIGGTDAAVGEWPWQVSLYLTHYGPV----CGGTLLTSEWVLTAARCFRDNKRA 307
>SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0)
Length = 1019
Score = 29.9 bits (64), Expect = 2.0
Identities = 21/71 (29%), Positives = 30/71 (42%)
Frame = +3
Query: 45 VSATDDPSQRIGGGTLVPITSYPFATALLNNPGSGVFTHRCGGSILTRNAILSAASCFYT 224
V + RI GG +P+ L G F + CGGS++ N +L+AA C +
Sbjct: 381 VCGVSSSTSRIVGGAAANPGDWPWQAQLRTTTG---FPY-CGGSLIHSNWVLTAAHCISS 436
Query: 225 GNNAHDAVLWG 257
A V G
Sbjct: 437 KRPAEVVVRLG 447
>SB_33775| Best HMM Match : Trypsin (HMM E-Value=0.012)
Length = 115
Score = 29.9 bits (64), Expect = 2.0
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = +3
Query: 63 PSQRIGGGTLVPITSYPFATALLNNPGSGVFTHRCGGSILTRNAILSAASC 215
P+ RI GGT +P+ L G F + CGGS++ IL+A C
Sbjct: 7 PNTRIVGGTAAKHGDWPWQAQLRTTSG---FPY-CGGSLIAPQWILTATHC 53
>SB_21575| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 696
Score = 29.9 bits (64), Expect = 2.0
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = +1
Query: 478 GSRIFNRSSVSIQLRRTVIWVVDQQICSNRDSELGFTVASNMVCLGWLDVGVRGQCQGDN 657
GS I +S I L++ ++ + C N+ + T +C G G G C GD+
Sbjct: 211 GSTIGTGNSPRI-LQQAMLPIASHNDCKNKYYGVSSTAH---LCAGEARSGASGGCNGDS 266
Query: 658 GSPIL--DNG 681
G P++ DNG
Sbjct: 267 GGPLVCEDNG 276
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/63 (20%), Positives = 31/63 (49%)
Frame = +1
Query: 484 RIFNRSSVSIQLRRTVIWVVDQQICSNRDSELGFTVASNMVCLGWLDVGVRGQCQGDNGS 663
R+ + V++ L++ + +V ++ C + + +C+G+ CQGD+G
Sbjct: 453 RLQSLGDVALTLQQAKVPIVSKEDCKRAYGAI--IRPYSHICVGFNTENAASSCQGDSGG 510
Query: 664 PIL 672
P++
Sbjct: 511 PLV 513
>SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1465
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +3
Query: 78 GGGTLVPITSYPFATAL-LNNPGSGVFTHRCGGSILTRNAILSAASC 215
GG +P YP+ AL + S T CGG+++ + +L+AA C
Sbjct: 1163 GGSDSIP-GGYPWQVALEFDTFQSNYNTFHCGGTLIAEDWVLTAAHC 1208
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/62 (25%), Positives = 27/62 (43%)
Frame = +1
Query: 475 MGSRIFNRSSVSIQLRRTVIWVVDQQICSNRDSELGFTVASNMVCLGWLDVGVRGQCQGD 654
+G + S L+ ++ VV+ C + V SNM+C G+ + R C D
Sbjct: 1300 LGWGVTENKRPSKTLKEAIVPVVNHNACKKAYENETWPVTSNMLCAGYKNKS-RDSCNRD 1358
Query: 655 NG 660
+G
Sbjct: 1359 SG 1360
>SB_50961| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 1007
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = +3
Query: 72 RIGGGTLVPITSYPFATALLNNPGSGVFTHRCGGSILTRNAILSAASCFYTGN 230
RI GG + +P+ L + CGGS++ R +++AA C N
Sbjct: 432 RIVGGQTAKVEDWPWQAGLKKGLDDTIV---CGGSLINREWVVTAAHCIDRNN 481
>SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1864
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +3
Query: 105 SYPFATALLNNPGSGVFTHRCGGSILTRNAILSAASCF 218
S+P+ AL SG RCGG+++ + +L+AA CF
Sbjct: 1249 SWPWQVALTL---SGNPVQRCGGALIAADWVLTAAHCF 1283
>SB_17195| Best HMM Match : Trypsin (HMM E-Value=4.9e-06)
Length = 379
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/57 (24%), Positives = 30/57 (52%)
Frame = +3
Query: 63 PSQRIGGGTLVPITSYPFATALLNNPGSGVFTHRCGGSILTRNAILSAASCFYTGNN 233
P RI T + ++PF+ ++ + G C G++++R +L++A C + G +
Sbjct: 141 PDSRIRVNTTLAAHTFPFSASVKLSTG-------CSGTLISRQHVLTSAHCVHNGKS 190
>SB_56478| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 968
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = +3
Query: 63 PSQRIGGGTLVPITSYPFATALLNNPGSGVFTHRCGGSILTRNAILSAASC 215
PS RI GGT +P+ L + G CGGS++ +L+A C
Sbjct: 660 PSTRIVGGTAAKQGDWPWQAQLRSTSGFPF----CGGSLIHPQWVLTATHC 706
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +1
Query: 589 VASNMVCLGWLDVGVRGQCQGDNGSPIL 672
+ +M+C G LD G CQGD+G P++
Sbjct: 864 IHDSMLCAG-LDQGGIDTCQGDSGGPMV 890
>SB_34025| Best HMM Match : Homeobox (HMM E-Value=1.1e-35)
Length = 460
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/69 (23%), Positives = 35/69 (50%)
Frame = -2
Query: 596 LATVKPSSLSLFEHICWSTTHITVRLS*IETLDLLKIRLPIQSLQRLGRY*KCKCGLQGL 417
+AT+KP+S + + + + +++ E + ++ Q+ + +G Y KC G+
Sbjct: 1 MATIKPTSFMIADILNLQEANSSIKTCAEEASN--SVQESTQNDKAIGEYLKCSTGIPYA 58
Query: 416 QLRRDQPRT 390
+ R QP+T
Sbjct: 59 KTRDSQPKT 67
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +3
Query: 72 RIGGGTLVPITSYPFATALLNNPGSGVFTHRCGGSILTRNAILSAASCFYTGNN 233
RI G S+P+ +L G H CGGS+++ +++AA C + N
Sbjct: 105 RIINGQNAQPHSWPWQISLRGRSGF----HTCGGSLISDRWVVTAAHCIHRNKN 154
>SB_22253| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 870
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/42 (35%), Positives = 18/42 (42%)
Frame = +1
Query: 400 WSRRSCRPCRPHLHFQ*RPSR*SDWMGSRIFNRSSVSIQLRR 525
W+ R RPH H R S W R F + +I LRR
Sbjct: 668 WNSRENLGARPHAHIDMHRVRRSQWYHIRAFVLAYTNIALRR 709
>SB_10327| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 865
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 156 THRCGGSILTRNAILSAASCFYTGNNAHDAVL 251
+H CG S+LT L+AA C ++A D L
Sbjct: 263 SHICGASLLTPGWALTAAHCLTLSDDASDYTL 294
>SB_46027| Best HMM Match : Fibrinogen_C (HMM E-Value=0.24)
Length = 901
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +1
Query: 556 CSNRDSELGFTVASNMVCLGWLDVGVRGQCQGDNGS 663
C + DS +GF + N G +C GDNG+
Sbjct: 854 CGSPDSRIGFGGSGNYCGQSSYSAGNEARCDGDNGN 889
>SB_20652| Best HMM Match : OmpH (HMM E-Value=1.9)
Length = 842
Score = 28.3 bits (60), Expect = 6.2
Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = +2
Query: 332 FSPTTRANDIAVLRTRFNIQFVAGLVEAAGLVGRTY---TFSNDQAVEAIGWGAVSS 493
FSPT+ A + +T + + GLV G +GR F+ D + A+ + +++
Sbjct: 335 FSPTSFAEQSKITKTITDAAVITGLVAGIGWIGRKVLREDFTKDPSANAMNYAKMTA 391
>SB_10273| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 739
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 589 VASNMVCLGWLDVGVRGQCQGDNGSPI 669
+ +M+C G LD G CQGD+G P+
Sbjct: 489 IHESMLCAG-LDAGGVDACQGDSGGPM 514
>SB_59706| Best HMM Match : Trypsin (HMM E-Value=0.16)
Length = 91
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +1
Query: 517 LRRTVIWVVDQQICSNRDSELGFTVASNMVCLGWLDVGVRGQCQGDNGSPIL 672
L + + +V CS S L +MVC G G+ CQGD+G P++
Sbjct: 15 LMQVEVPIVSASTCSRAYSRLH----ESMVCAGRASGGI-DSCQGDSGGPMV 61
>SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35)
Length = 2748
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -3
Query: 421 ACSFDETSHELNVESGPENGNVVGPGRGRE 332
ACS EL+VE + PGRGRE
Sbjct: 1069 ACSISRRRTELHVEQSMLRNAIDNPGRGRE 1098
>SB_17890| Best HMM Match : Trypsin (HMM E-Value=3.2)
Length = 157
Score = 27.9 bits (59), Expect = 8.1
Identities = 18/62 (29%), Positives = 28/62 (45%)
Frame = +3
Query: 69 QRIGGGTLVPITSYPFATALLNNPGSGVFTHRCGGSILTRNAILSAASCFYTGNNAHDAV 248
+RI GG + +P+ ALL N C GS++ I++A CF ++ D
Sbjct: 52 KRIVGGVVSSEGLWPWQVALLLND-----RQVCAGSLIEARWIITAGHCFKDPRSSADPD 106
Query: 249 LW 254
W
Sbjct: 107 KW 108
>SB_11235| Best HMM Match : Trypsin (HMM E-Value=1.1e-08)
Length = 235
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +3
Query: 156 THRCGGSILTRNAILSAASCFYTGNNAHDAVL 251
+H CG S+L+ L+AA C +N D L
Sbjct: 108 SHNCGASLLSPGWALTAAHCVQRSSNPADYTL 139
>SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1033
Score = 27.9 bits (59), Expect = 8.1
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +1
Query: 607 CLGWLDVGVRGQCQGDNGSPIL 672
C G VG G C GD+G P++
Sbjct: 662 CAGEARVGAAGGCNGDSGGPLV 683
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,337,615
Number of Sequences: 59808
Number of extensions: 562928
Number of successful extensions: 1543
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 1274
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1538
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1781448916
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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