Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0556
         (687 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    33   0.002
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    24   1.6  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   8.3  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   8.3  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   8.3  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    21   8.3  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    21   8.3  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 33.5 bits (73), Expect = 0.002
 Identities = 20/66 (30%), Positives = 32/66 (48%)
 Frame = +3

Query: 60  DPSQRIGGGTLVPITSYPFATALLNNPGSGVFTHRCGGSILTRNAILSAASCFYTGNNAH 239
           +PS RI GGT   I  +P    +      G+    CG +I+++  +L+AA C    N   
Sbjct: 157 NPS-RIVGGTNTGINEFPMMAGIKRTYEPGMI---CGATIISKRYVLTAAHCIIDENTTK 212

Query: 240 DAVLWG 257
            A++ G
Sbjct: 213 LAIVVG 218


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = -1

Query: 555 YLLVHHPYNSTPQ-LNRDTGSVEDTAPHPIASTAWSLL 445
           YL+V +   S+P+ L+    S   T+P P +STA +L+
Sbjct: 816 YLMVGNSPASSPRYLSAAATSSTSTSPRPASSTAATLV 853


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 5/22 (22%), Positives = 13/22 (59%)
 Frame = -2

Query: 611 RQTMLLATVKPSSLSLFEHICW 546
           ++ +++  ++P  L  F+  CW
Sbjct: 811 KKALMIVGIRPERLPSFDDECW 832


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 5/22 (22%), Positives = 13/22 (59%)
 Frame = -2

Query: 611 RQTMLLATVKPSSLSLFEHICW 546
           ++ +++  ++P  L  F+  CW
Sbjct: 849 KKALMIVGIRPERLPSFDDECW 870


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 8/29 (27%), Positives = 14/29 (48%)
 Frame = -2

Query: 302  CTSFLQNYCRLSQLWPPQDRIVGIVSSIK 216
            CT+      R+S + PP     G+++  K
Sbjct: 1090 CTTLTSQTIRISWMSPPLSAANGVITGYK 1118


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -2

Query: 392 TEC*IWS*ERQC 357
           T+C +W+ +RQC
Sbjct: 184 TDCQLWAIDRQC 195


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +2

Query: 257 ARVGSAYSNSGGTMYI 304
           +RVG+ Y  SGG M +
Sbjct: 199 SRVGTKYHRSGGLMNV 214


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 215,721
Number of Sequences: 438
Number of extensions: 4571
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20952180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)