Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0554
(636 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0062 - 13084207-13084800 29 2.3
11_04_0454 - 17895935-17896093,17896878-17896911,17897114-178972... 29 2.3
07_03_0614 - 19974200-19975426 29 2.3
06_01_0580 + 4148969-4149101,4149394-4149546,4149682-4150095,415... 29 3.1
12_01_1030 - 10578110-10578874,10579217-10579336 29 4.1
11_04_0300 - 16130589-16131158,16131594-16131680 29 4.1
11_04_0299 + 16127671-16128180,16128217-16128516 29 4.1
11_04_0220 + 14991666-14992892 29 4.1
11_03_0127 - 10408628-10409106,10409188-10409821 29 4.1
09_02_0472 + 9657354-9658346 29 4.1
09_02_0125 + 4554786-4556012 29 4.1
07_03_0416 - 17962740-17963009,17963076-17963732 29 4.1
07_03_0201 - 15036103-15037329 29 4.1
07_02_0011 + 11753791-11753923,11754178-11754269,11757396-117576... 29 4.1
05_04_0191 + 18927302-18927707,18928747-18928979,18929062-189291... 29 4.1
04_04_0530 + 26024931-26025923 29 4.1
04_01_0230 - 2921845-2922690 29 4.1
03_06_0425 - 33847906-33848892 29 4.1
03_05_0308 - 22977542-22978174,22978202-22978387 29 4.1
02_05_0205 + 26755024-26756217 29 4.1
02_04_0176 + 20658610-20659836 29 4.1
01_03_0280 - 14546334-14546815,14546894-14547560,14550333-145517... 29 4.1
01_03_0141 + 13015330-13016175 29 4.1
07_01_0390 + 2931331-2932299 28 5.4
12_02_0701 + 22271550-22271652,22272310-22272791,22272823-22272927 28 7.1
03_05_0480 + 24740567-24741559 28 7.1
10_01_0097 - 1171949-1172047,1172520-1172591,1172791-1172949,117... 27 9.4
>12_02_0062 - 13084207-13084800
Length = 197
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = -1
Query: 294 PHPSRSTKIPWGIRHLVG**HPPGCLGRSGW 202
P P +T PWG+R HP G GW
Sbjct: 164 PDPEATTSEPWGLRFACANDHPLPAPGSCGW 194
>11_04_0454 -
17895935-17896093,17896878-17896911,17897114-17897252,
17897487-17897561,17897666-17897945
Length = 228
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -2
Query: 488 RRQGHPSQYCRSRGHQPGPNRR 423
RR+ H ++ R RG QP PNRR
Sbjct: 27 RRRRHHQRHRRRRGGQPAPNRR 48
>07_03_0614 - 19974200-19975426
Length = 408
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = -1
Query: 294 PHPSRSTKIPWGIRHLVG**HPPGCLGRSGW 202
P P +T PWG+R HP G GW
Sbjct: 375 PDPEATTSEPWGLRFACASDHPLPAPGSCGW 405
>06_01_0580 +
4148969-4149101,4149394-4149546,4149682-4150095,
4150218-4150294,4151479-4152699,4153057-4153128
Length = 689
Score = 29.1 bits (62), Expect = 3.1
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -1
Query: 366 SLLVTMSSSLWRLPSDTLPP*TVVPHPSRSTKIPWGIR 253
SL T+SS+L R+PS +LPP ++ +P IR
Sbjct: 394 SLTNTLSSTLQRVPSSSLPPQELLECKQAKVSMPPSIR 431
>12_01_1030 - 10578110-10578874,10579217-10579336
Length = 294
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = -1
Query: 294 PHPSRSTKIPWGIRHLVG**HPPGCLGRSGW 202
P P +T PWG+R HP G GW
Sbjct: 261 PDPEATTSKPWGLRFARASNHPLPAPGSCGW 291
>11_04_0300 - 16130589-16131158,16131594-16131680
Length = 218
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = -1
Query: 294 PHPSRSTKIPWGIRHLVG**HPPGCLGRSGW 202
P P +T PWG+R HP G GW
Sbjct: 185 PDPEATTSEPWGLRFARASDHPLPAPGSCGW 215
>11_04_0299 + 16127671-16128180,16128217-16128516
Length = 269
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = -1
Query: 294 PHPSRSTKIPWGIRHLVG**HPPGCLGRSGW 202
P P +T PWG+R HP G GW
Sbjct: 236 PDPEATTSEPWGLRFARASDHPLPAPGSCGW 266
>11_04_0220 + 14991666-14992892
Length = 408
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = -1
Query: 294 PHPSRSTKIPWGIRHLVG**HPPGCLGRSGW 202
P P +T PWG+R HP G GW
Sbjct: 375 PDPGATTSEPWGLRFARASDHPLPAPGSCGW 405
>11_03_0127 - 10408628-10409106,10409188-10409821
Length = 370
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = -1
Query: 294 PHPSRSTKIPWGIRHLVG**HPPGCLGRSGW 202
P P +T PWG+R HP G GW
Sbjct: 337 PDPEATTSEPWGLRFARASDHPLPAPGSCGW 367
>09_02_0472 + 9657354-9658346
Length = 330
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = -1
Query: 294 PHPSRSTKIPWGIRHLVG**HPPGCLGRSGW 202
P P +T PWG+R HP G GW
Sbjct: 297 PDPEATTSEPWGLRFARASDHPLPAPGSCGW 327
>09_02_0125 + 4554786-4556012
Length = 408
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = -1
Query: 294 PHPSRSTKIPWGIRHLVG**HPPGCLGRSGW 202
P P +T PWG+R HP G GW
Sbjct: 375 PDPEATTSEPWGLRFARASDHPLPAPGSCGW 405
>07_03_0416 - 17962740-17963009,17963076-17963732
Length = 308
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = -1
Query: 294 PHPSRSTKIPWGIRHLVG**HPPGCLGRSGW 202
P P +T PWG+R HP G GW
Sbjct: 275 PDPEATTSEPWGLRFARASDHPLPAPGSCGW 305
>07_03_0201 - 15036103-15037329
Length = 408
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = -1
Query: 294 PHPSRSTKIPWGIRHLVG**HPPGCLGRSGW 202
P P +T PWG+R HP G GW
Sbjct: 375 PDPEATTSEPWGLRFARASDHPLPAPGSCGW 405
>07_02_0011 +
11753791-11753923,11754178-11754269,11757396-11757689,
11757801-11758622
Length = 446
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = -1
Query: 294 PHPSRSTKIPWGIRHLVG**HPPGCLGRSGW 202
P P +T PWG+R HP G GW
Sbjct: 413 PDPEATTSEPWGLRFARASDHPLPAPGSCGW 443
>05_04_0191 +
18927302-18927707,18928747-18928979,18929062-18929127,
18929262-18929340,18929935-18930014,18930099-18930122,
18930254-18930375,18930902-18931109,18931960-18932006,
18932914-18932998,18933292-18933355,18933488-18933609
Length = 511
Score = 28.7 bits (61), Expect = 4.1
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = -3
Query: 556 VLRGRCHWHCSFQKIRAY*RILEEGRGTQVSIVVVAATSPDQTGAEFVI 410
V R RC+W SF+ + I E+GRG + V A + GA +I
Sbjct: 333 VERRRCYWGYSFENLATENSIDEDGRGIDAN-VEFCAVIKTKLGAHRII 380
>04_04_0530 + 26024931-26025923
Length = 330
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = -1
Query: 294 PHPSRSTKIPWGIRHLVG**HPPGCLGRSGW 202
P P +T PWG+R HP G GW
Sbjct: 297 PDPEATTSEPWGLRFARASDHPLPAPGSCGW 327
>04_01_0230 - 2921845-2922690
Length = 281
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = -1
Query: 294 PHPSRSTKIPWGIRHLVG**HPPGCLGRSGW 202
P P +T PWG+R HP G GW
Sbjct: 248 PDPEATTSEPWGLRFARASDHPLPAPGSCGW 278
>03_06_0425 - 33847906-33848892
Length = 328
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = -1
Query: 294 PHPSRSTKIPWGIRHLVG**HPPGCLGRSGW 202
P P +T PWG+R HP G GW
Sbjct: 295 PDPEATTSEPWGLRFARASDHPLPAPGSCGW 325
>03_05_0308 - 22977542-22978174,22978202-22978387
Length = 272
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = -1
Query: 294 PHPSRSTKIPWGIRHLVG**HPPGCLGRSGW 202
P P +T PWG+R HP G GW
Sbjct: 239 PDPEATTSEPWGLRFARASNHPLPAPGSCGW 269
>02_05_0205 + 26755024-26756217
Length = 397
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = -1
Query: 294 PHPSRSTKIPWGIRHLVG**HPPGCLGRSGW 202
P P +T PWG+R HP G GW
Sbjct: 364 PDPEATTSEPWGLRFARASDHPLPAPGSCGW 394
>02_04_0176 + 20658610-20659836
Length = 408
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = -1
Query: 294 PHPSRSTKIPWGIRHLVG**HPPGCLGRSGW 202
P P +T PWG+R HP G GW
Sbjct: 375 PDPEATTSEPWGLRFARASDHPLPAPGSCGW 405
>01_03_0280 - 14546334-14546815,14546894-14547560,14550333-14551754,
14552831-14553127
Length = 955
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = -1
Query: 294 PHPSRSTKIPWGIRHLVG**HPPGCLGRSGW 202
P P +T PWG+R HP G GW
Sbjct: 922 PDPEATTSEPWGLRFARASDHPLPAPGSCGW 952
>01_03_0141 + 13015330-13016175
Length = 281
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = -1
Query: 294 PHPSRSTKIPWGIRHLVG**HPPGCLGRSGW 202
P P +T PWG+R HP G GW
Sbjct: 248 PDPEATTSEPWGLRFARASDHPLPAPGSCGW 278
>07_01_0390 + 2931331-2932299
Length = 322
Score = 28.3 bits (60), Expect = 5.4
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = -1
Query: 294 PHPSRSTKIPWGIRHLVG**HPPGCLGRSGW 202
P P +T PWG+R HP G GW
Sbjct: 289 PDPEATTSEPWGLRFARASDHPLPAPGSYGW 319
>12_02_0701 + 22271550-22271652,22272310-22272791,22272823-22272927
Length = 229
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +1
Query: 280 SARMGNYRSRRQCI*RQPPQARTHCDQQRKLQG 378
SAR R I +PP R HC+++R+++G
Sbjct: 86 SARNCRRRRHHPRIRLRPPPTRRHCEREREMRG 118
>03_05_0480 + 24740567-24741559
Length = 330
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = -1
Query: 294 PHPSRSTKIPWGIRHLVG**HPPGCLGRSGW 202
P P +T PWG+R HP G GW
Sbjct: 297 PDPEATTSEPWGLRFTRASDHPLPAPGFCGW 327
>10_01_0097 - 1171949-1172047,1172520-1172591,1172791-1172949,
1172998-1173381,1173478-1175253,1175329-1175452,
1176859-1177027,1177131-1177226,1177339-1177527,
1177965-1179303
Length = 1468
Score = 27.5 bits (58), Expect = 9.4
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = +2
Query: 218 KHPGGCYYPTRCLIPQGIFVDLLGWGTTVQGGSVSDGNLHKLELIVTNKENCRE 379
K P YY + P IF D+ + +GGS S N+H+ + ++ EN ++
Sbjct: 1089 KLPDEAYYRDALMAPY-IFYDISHGRESHRGGSSSYQNVHEAQFVLRLYENLQK 1141
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,473,639
Number of Sequences: 37544
Number of extensions: 460270
Number of successful extensions: 1147
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1109
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1147
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1561213104
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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