Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0554
(636 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_35182| Best HMM Match : CUB (HMM E-Value=0) 40 0.001
SB_25649| Best HMM Match : Trypsin (HMM E-Value=0) 38 0.007
SB_33085| Best HMM Match : Trypsin (HMM E-Value=0) 38 0.009
SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.009
SB_43527| Best HMM Match : Trypsin (HMM E-Value=0) 36 0.028
SB_21575| Best HMM Match : Trypsin (HMM E-Value=0) 36 0.036
SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.036
SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 34 0.084
SB_26948| Best HMM Match : LIM (HMM E-Value=2.3e-39) 34 0.084
SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.084
SB_4906| Best HMM Match : Trypsin (HMM E-Value=0) 34 0.084
SB_37284| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.19
SB_30267| Best HMM Match : Trypsin (HMM E-Value=0) 33 0.26
SB_15907| Best HMM Match : Aldedh (HMM E-Value=3.2e-23) 32 0.34
SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22) 32 0.34
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.45
SB_42238| Best HMM Match : Trypsin (HMM E-Value=0) 31 0.59
SB_1799| Best HMM Match : zf-C2H2 (HMM E-Value=0) 31 1.0
SB_51536| Best HMM Match : Trypsin (HMM E-Value=0) 31 1.0
SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_43823| Best HMM Match : MAM (HMM E-Value=0) 28 5.5
SB_53761| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_10784| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_22064| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_3824| Best HMM Match : Trypsin (HMM E-Value=2.8026e-45) 27 9.7
SB_33125| Best HMM Match : Pkinase (HMM E-Value=0) 27 9.7
>SB_35182| Best HMM Match : CUB (HMM E-Value=0)
Length = 963
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/65 (32%), Positives = 33/65 (50%)
Frame = +2
Query: 287 GWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYDNT 466
GWG +G + L + ++ + +++ C Q DR +T+N CAG+ R GG D
Sbjct: 351 GWGALQEGAGSTSKVLMQAKVPLVSRDQCSHQQSYGDR-ITENMLCAGM-RQGGVDSCQG 408
Query: 467 DLGAP 481
D G P
Sbjct: 409 DSGGP 413
>SB_25649| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 718
Score = 37.9 bits (84), Expect = 0.007
Identities = 23/74 (31%), Positives = 32/74 (43%)
Frame = +2
Query: 260 PQGIFVDLLGWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVTDNKFCAGLVR 439
P G L GWG TV V L +L++ + NK C + ++ + CAG
Sbjct: 109 PAGKMCYLTGWGETVLDSGVFSPTLKQLKVPLVNKSVCNSN-NSYSGIIHEQFMCAG-YN 166
Query: 440 AGGRDYDNTDLGAP 481
GG+D D G P
Sbjct: 167 QGGQDGCLGDSGGP 180
Score = 31.5 bits (68), Expect = 0.59
Identities = 15/57 (26%), Positives = 27/57 (47%)
Frame = +2
Query: 260 PQGIFVDLLGWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVTDNKFCAG 430
P G + GWG T + SD L + ++ + +++ C Y G ++ + CAG
Sbjct: 662 PDGAGCYVTGWGRTAENEGYSD-VLREAQVRLVSRDTCNASYSG---IINERYICAG 714
>SB_33085| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 537
Score = 37.5 bits (83), Expect = 0.009
Identities = 19/57 (33%), Positives = 25/57 (43%)
Frame = +2
Query: 260 PQGIFVDLLGWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVTDNKFCAG 430
P G + GWG+T GS S L ++ L + N C Y R +T CAG
Sbjct: 415 PAGTLCYVTGWGSTNYRGSPSPNYLQEVGLPLVNHSQCHATYLTASRKITPRMRCAG 471
>SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 786
Score = 37.5 bits (83), Expect = 0.009
Identities = 19/57 (33%), Positives = 25/57 (43%)
Frame = +2
Query: 260 PQGIFVDLLGWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVTDNKFCAG 430
P G + GWG+T GS S L ++ L + N C Y R +T CAG
Sbjct: 664 PAGTLCYVTGWGSTNYRGSPSPNYLQEVGLPLVNHSQCHATYLTASRKITPRMRCAG 720
>SB_43527| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 366
Score = 35.9 bits (79), Expect = 0.028
Identities = 21/72 (29%), Positives = 30/72 (41%)
Frame = +2
Query: 287 GWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYDNT 466
GWG LH+ + + + + CR+ + D +VT N FCAG + D
Sbjct: 251 GWGKRKLWRDRVANRLHEATVPIVDIQTCRKAHP--DYIVTANMFCAGFENSSRGDACQG 308
Query: 467 DLGAPAFFQNAL 502
D G P N L
Sbjct: 309 DSGGPFSVDNPL 320
Score = 29.9 bits (64), Expect = 1.8
Identities = 8/24 (33%), Positives = 17/24 (70%)
Frame = +3
Query: 141 HPEFSEENYDKDVSIVRVTHAIHF 212
HP +S ++YD D++++R+ + F
Sbjct: 199 HPHYSPDSYDSDIALIRLAQPVTF 222
>SB_21575| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 696
Score = 35.5 bits (78), Expect = 0.036
Identities = 21/67 (31%), Positives = 33/67 (49%)
Frame = +2
Query: 281 LLGWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYD 460
+ GWG+T+ G+ S L + L + + +C+ +Y G V + CAG R+G
Sbjct: 207 ITGWGSTIGTGN-SPRILQQAMLPIASHNDCKNKYYG---VSSTAHLCAGEARSGASGGC 262
Query: 461 NTDLGAP 481
N D G P
Sbjct: 263 NGDSGGP 269
Score = 28.3 bits (60), Expect = 5.5
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +1
Query: 511 VSFGKSNANDIYPVVLTSISSFTEWILQ 594
VS+GK + Y V ++S+T+WI Q
Sbjct: 284 VSYGKLHCPTTYYTVFARVASYTDWIKQ 311
>SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 35.5 bits (78), Expect = 0.036
Identities = 23/79 (29%), Positives = 34/79 (43%)
Frame = +2
Query: 260 PQGIFVDLLGWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVTDNKFCAGLVR 439
P G + GWGT GGS + L++ + + + C Y G ++ + CAG
Sbjct: 751 PNGTMCYITGWGTLSSGGSQPEA-LNQAVVPLRTRSECERSYPGK---ISADMICAGNPE 806
Query: 440 AGGRDYDNTDLGAPAFFQN 496
GG D D G P Q+
Sbjct: 807 -GGVDTCQGDSGGPLVCQH 824
>SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 506
Score = 34.3 bits (75), Expect = 0.084
Identities = 21/67 (31%), Positives = 30/67 (44%)
Frame = +2
Query: 281 LLGWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYD 460
+ GWGT GG+ L + + + ++ C Y + D+ CAGL AGG D
Sbjct: 78 ITGWGTLASGGN-QPNKLMQASVPLVSQSKCNTAYPNK---IHDSMLCAGL-DAGGIDAC 132
Query: 461 NTDLGAP 481
D G P
Sbjct: 133 QGDSGGP 139
>SB_26948| Best HMM Match : LIM (HMM E-Value=2.3e-39)
Length = 351
Score = 34.3 bits (75), Expect = 0.084
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = -2
Query: 518 KDTSLLAHFGRRQGHPSQYCRSRGHQPGPNRRRICYQSRRDHDPCTV 378
KD L+ H G R +PS+ C + P +++ YQS+ HD C +
Sbjct: 158 KDEKLICH-GCRGINPSKVCAACNGDFAPGEKKVGYQSKTFHDKCFI 203
>SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1465
Score = 34.3 bits (75), Expect = 0.084
Identities = 26/87 (29%), Positives = 37/87 (42%)
Frame = +2
Query: 239 YPTRCLIPQGIFVDLLGWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVTDNK 418
Y R + P+ V +LGWG T L + + V N C++ Y+ VT N
Sbjct: 1286 YQRRLVKPRAKGV-MLGWGVTEN--KRPSKTLKEAIVPVVNHNACKKAYENETWPVTSNM 1342
Query: 419 FCAGLVRAGGRDYDNTDLGAPAFFQNA 499
CAG + RD N D G F ++
Sbjct: 1343 LCAG-YKNKSRDSCNRDSGGGFVFYDS 1368
>SB_4906| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 530
Score = 34.3 bits (75), Expect = 0.084
Identities = 21/67 (31%), Positives = 30/67 (44%)
Frame = +2
Query: 281 LLGWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYD 460
+ GWGT GG+ L + + + ++ C Y + D+ CAGL AGG D
Sbjct: 422 ITGWGTLASGGN-QPNKLMQASVPLVSQSKCNTAYPNK---IHDSMLCAGL-DAGGIDAC 476
Query: 461 NTDLGAP 481
D G P
Sbjct: 477 QGDSGGP 483
>SB_37284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1031
Score = 33.1 bits (72), Expect = 0.19
Identities = 22/74 (29%), Positives = 33/74 (44%)
Frame = +2
Query: 233 CYYPTRCLIPQGIFVDLLGWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVTD 412
C P +P G + GWG GG+ S L + ++ + + + C + Y G
Sbjct: 359 CLAPRSSPLPDGTRCWISGWGRLSSGGA-SPNVLMQAQVPLVSGQTCSQAYPGRTHY--- 414
Query: 413 NKFCAGLVRAGGRD 454
+ CAGL R GG D
Sbjct: 415 SMLCAGL-RHGGVD 427
>SB_30267| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 282
Score = 32.7 bits (71), Expect = 0.26
Identities = 23/89 (25%), Positives = 40/89 (44%), Gaps = 8/89 (8%)
Frame = +2
Query: 281 LLGWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRV--------VTDNKFCAGLV 436
+ GWG + G ++ L + +L V + C E++ G + VT+ CAG
Sbjct: 158 ITGWGRSYYPGPTAN-KLQQADLRVVSNRACSERHMGSKNMRLENGTWRVTETMLCAGDA 216
Query: 437 RAGGRDYDNTDLGAPAFFQNALVGSYLLE 523
G++ N D G P +N G ++L+
Sbjct: 217 GKTGKNGCNGDSGGPFVCRNT-AGQWVLQ 244
>SB_15907| Best HMM Match : Aldedh (HMM E-Value=3.2e-23)
Length = 275
Score = 32.3 bits (70), Expect = 0.34
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = -2
Query: 143 MVNSK-VNIRYFTGLTATGRSSDNATVCRIVEFSMETGSS*KVVVVGE 3
M+NS+ +N FTG TGR AT +V+ +E GS ++V+ +
Sbjct: 215 MINSRGINALTFTGSLETGRKVAAATAVNLVKCQLEMGSKNALIVLDD 262
>SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22)
Length = 231
Score = 32.3 bits (70), Expect = 0.34
Identities = 20/61 (32%), Positives = 30/61 (49%)
Frame = +2
Query: 266 GIFVDLLGWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVTDNKFCAGLVRAG 445
G + ++GWG TV GG ++ L + L V +C ++ RV + CAG RA
Sbjct: 87 GAYTVVVGWGRTVGGGQGAE-ILQQAMLPVAYDNHCMQRNNQLMRVDPVSMICAGGQRAA 145
Query: 446 G 448
G
Sbjct: 146 G 146
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 31.9 bits (69), Expect = 0.45
Identities = 24/84 (28%), Positives = 35/84 (41%)
Frame = +2
Query: 281 LLGWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYD 460
+ GWG S L + L + + ENCR +Y V + CAG R+
Sbjct: 561 ITGWGAINGDTQQSPDILQQAMLPIASHENCRRKY---GDVSSTAHLCAGEARSDAAGGC 617
Query: 461 NTDLGAPAFFQNALVGSYLLERAM 532
N D G P ++ GS+ L A+
Sbjct: 618 NGDSGGPLVCEDN--GSWFLHGAV 639
>SB_42238| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 657
Score = 31.5 bits (68), Expect = 0.59
Identities = 15/57 (26%), Positives = 27/57 (47%)
Frame = +2
Query: 260 PQGIFVDLLGWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVTDNKFCAG 430
P G + GWG T + SD L + ++ + +++ C Y G ++ + CAG
Sbjct: 377 PDGAGCYVTGWGRTAENEGYSD-VLREAQVRLVSRDTCNASYSG---IINERYICAG 429
>SB_1799| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 907
Score = 30.7 bits (66), Expect = 1.0
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = -2
Query: 485 RQGHPSQYCRSRGHQPGPNRR--RICYQSRRD 396
RQG P +YCRS Q GP RR R Y +R+
Sbjct: 338 RQGTPDEYCRSSVKQIGPFRRFERRGYSKKRN 369
>SB_51536| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 347
Score = 30.7 bits (66), Expect = 1.0
Identities = 19/65 (29%), Positives = 29/65 (44%)
Frame = +2
Query: 287 GWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYDNT 466
GWG + G LH+ + + +++ C++ Y V+ CAG AGG D
Sbjct: 238 GWGHLQEAGH-GPWVLHQAAVPLVSRDTCQKAYNDLHYKVSSRMRCAG-YGAGGIDACQG 295
Query: 467 DLGAP 481
D G P
Sbjct: 296 DSGGP 300
>SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 898
Score = 29.9 bits (64), Expect = 1.8
Identities = 20/61 (32%), Positives = 28/61 (45%)
Frame = +2
Query: 281 LLGWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYD 460
+ GWG TV GGS + G L + L V +C+ V + + CAG GG D
Sbjct: 157 ITGWGRTVGGGSAA-GILQQAMLPVAGDSDCQRTNGRLVPVDSRSMICAGGQGKGGCQGD 215
Query: 461 N 463
+
Sbjct: 216 S 216
>SB_43823| Best HMM Match : MAM (HMM E-Value=0)
Length = 1724
Score = 28.3 bits (60), Expect = 5.5
Identities = 15/43 (34%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Frame = +2
Query: 158 GELRQGCEHRTSNTCHPLRPKHPGGC-YYPTRCLIPQGIFVDL 283
GE QGC L P HPG C + CL F D+
Sbjct: 367 GEDEQGCATTAPVITPSLGPPHPGDCNFEKDMCLWTSATFADM 409
>SB_53761| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 469
Score = 27.9 bits (59), Expect = 7.3
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +2
Query: 212 RPKHPGGCYYPTRCLIPQGIFVDLLGWGTTVQGGSVSD 325
R HPGGC+Y R + Q + GW Q + D
Sbjct: 413 RDDHPGGCHYVARDAMCQ--CTEHFGWSAIWQNSGLDD 448
>SB_10784| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 463
Score = 27.9 bits (59), Expect = 7.3
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +3
Query: 156 EENYDKDVSIVRVTHAIHFGPNIQEGAIIQQG 251
++ Y +D+ RVTH I P + G QQG
Sbjct: 389 QQGYTRDIGSSRVTHGIEAVPGLHMGYRQQQG 420
>SB_22064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 398
Score = 27.9 bits (59), Expect = 7.3
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +1
Query: 4 SPTTTTFQLLPVSMENSTILHTVALSLDLPVAVSPVKYLMFTLLLTIPNSL 156
SP+T+ Q++P + + L T + S +LPV + FT IP +
Sbjct: 143 SPSTSVKQMVPNTQASRLCLQTTSASSNLPVTTQQSFRMTFTPPSMIPKPI 193
>SB_3824| Best HMM Match : Trypsin (HMM E-Value=2.8026e-45)
Length = 234
Score = 27.5 bits (58), Expect = 9.7
Identities = 17/74 (22%), Positives = 27/74 (36%)
Frame = +2
Query: 260 PQGIFVDLLGWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVTDNKFCAGLVR 439
P G L GWG V L + + + + E+C+ +Y + + CAG +
Sbjct: 63 PVGSKCWLTGWGRQVDSSGPLPDILQQARIPIASHEDCKRKY--GSGIYSYTHLCAGEAK 120
Query: 440 AGGRDYDNTDLGAP 481
D G P
Sbjct: 121 PNAAGACQGDSGGP 134
>SB_33125| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 937
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = -1
Query: 453 SRPPARTKPAQNLLSVTTRS*P 388
+RPP KPA N LS T RS P
Sbjct: 594 ARPPPTAKPAVNRLSPTRRSLP 615
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,014,090
Number of Sequences: 59808
Number of extensions: 513261
Number of successful extensions: 1245
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1122
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1245
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1596754500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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