Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0553
(601 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_21520| Best HMM Match : Trypsin (HMM E-Value=0) 37 0.014
SB_12588| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.044
SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0) 33 0.18
SB_22567| Best HMM Match : Trypsin (HMM E-Value=6.6e-30) 33 0.18
SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22) 33 0.23
SB_30267| Best HMM Match : Trypsin (HMM E-Value=0) 32 0.41
SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.54
SB_10327| Best HMM Match : Trypsin (HMM E-Value=0) 31 0.71
SB_31846| Best HMM Match : Trypsin (HMM E-Value=0) 31 0.94
SB_42238| Best HMM Match : Trypsin (HMM E-Value=0) 30 1.2
SB_21033| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_1192| Best HMM Match : Trypsin (HMM E-Value=3.9e-23) 30 1.2
SB_10167| Best HMM Match : Trypsin (HMM E-Value=0) 30 1.2
SB_33085| Best HMM Match : Trypsin (HMM E-Value=0) 30 1.6
SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44) 29 2.9
SB_32032| Best HMM Match : PAN (HMM E-Value=0.029) 29 2.9
SB_21575| Best HMM Match : Trypsin (HMM E-Value=0) 29 2.9
SB_51536| Best HMM Match : Trypsin (HMM E-Value=0) 29 3.8
SB_56478| Best HMM Match : Trypsin (HMM E-Value=0) 28 6.6
SB_56305| Best HMM Match : zf-C4 (HMM E-Value=0) 28 6.6
SB_43527| Best HMM Match : Trypsin (HMM E-Value=0) 28 6.6
SB_10598| Best HMM Match : LRR_1 (HMM E-Value=4.4e-19) 28 6.6
SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_47534| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
SB_38755| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
SB_9601| Best HMM Match : Trypsin (HMM E-Value=0) 27 8.8
SB_8561| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
>SB_21520| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 800
Score = 36.7 bits (81), Expect = 0.014
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +1
Query: 517 STLCVDGSNGRSTCSGDSGGPLTIGNGG 600
+T+ G +G S CSGDSGGPL GG
Sbjct: 481 TTMICAGGSGSSACSGDSGGPLVCHEGG 508
>SB_12588| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 35.1 bits (77), Expect = 0.044
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = +1
Query: 523 LCVDGSNGRSTCSGDSGGPLTIGNGG 600
+CV G+ G S C+GDSGGPL GG
Sbjct: 110 MCVGGA-GSSACNGDSGGPLVCEEGG 134
>SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0)
Length = 687
Score = 33.1 bits (72), Expect = 0.18
Identities = 15/29 (51%), Positives = 16/29 (55%)
Frame = +1
Query: 514 ASTLCVDGSNGRSTCSGDSGGPLTIGNGG 600
AS +C G GR C GDSGGPL G
Sbjct: 573 ASMVCAGGP-GRGGCQGDSGGPLVCNEAG 600
>SB_22567| Best HMM Match : Trypsin (HMM E-Value=6.6e-30)
Length = 249
Score = 33.1 bits (72), Expect = 0.18
Identities = 15/29 (51%), Positives = 16/29 (55%)
Frame = +1
Query: 514 ASTLCVDGSNGRSTCSGDSGGPLTIGNGG 600
AS +C G GR C GDSGGPL G
Sbjct: 113 ASMVCAGGP-GRGGCQGDSGGPLVCNEAG 140
>SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22)
Length = 231
Score = 32.7 bits (71), Expect = 0.23
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +1
Query: 517 STLCVDGSNGRSTCSGDSGGPLTIGNGG 600
S +C G C GDSGGP GG
Sbjct: 135 SMICAGGQRAAGGCQGDSGGPFVCNEGG 162
>SB_30267| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 282
Score = 31.9 bits (69), Expect = 0.41
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Frame = +1
Query: 463 GHYQRRLRPHVWKQCVIASTLCVD--GSNGRSTCSGDSGGPLTIGN 594
G RL W+ V + LC G G++ C+GDSGGP N
Sbjct: 193 GSKNMRLENGTWR--VTETMLCAGDAGKTGKNGCNGDSGGPFVCRN 236
>SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 898
Score = 31.5 bits (68), Expect = 0.54
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +1
Query: 517 STLCVDGSNGRSTCSGDSGGPLTIGNGG 600
S +C G G+ C GDSGGP GG
Sbjct: 200 SMICA-GGQGKGGCQGDSGGPFVCEEGG 226
>SB_10327| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 865
Score = 31.1 bits (67), Expect = 0.71
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +1
Query: 517 STLCVDGSNGRSTCSGDSGGPL 582
S +C G+ G S C+GDSGGPL
Sbjct: 457 SMICAGGA-GSSACNGDSGGPL 477
>SB_31846| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 454
Score = 30.7 bits (66), Expect = 0.94
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +1
Query: 496 WKQCVIASTLCVDGSNGRSTCSGDSGGPLTIGN 594
++ ++ST+ G TC GDSGGPL N
Sbjct: 379 YEAAAVSSTMLCAQVPGIDTCQGDSGGPLVCEN 411
>SB_42238| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 657
Score = 30.3 bits (65), Expect = 1.2
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +1
Query: 544 GRSTCSGDSGGPLTIGN 594
GR +C GDSGGPL N
Sbjct: 172 GRDSCGGDSGGPLVCSN 188
>SB_21033| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 246
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +1
Query: 517 STLCVDGSNGRSTCSGDSGGPLTIGNGG 600
S +C G+ G S C GDSGGPL G
Sbjct: 132 SMVCAGGA-GSSICHGDSGGPLQCEENG 158
>SB_1192| Best HMM Match : Trypsin (HMM E-Value=3.9e-23)
Length = 136
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/29 (44%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Frame = +1
Query: 517 STLCVD-GSNGRSTCSGDSGGPLTIGNGG 600
S +C G C GDSGGP+ NGG
Sbjct: 68 SMICAGIDKGGIDACQGDSGGPMVCENGG 96
>SB_10167| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 532
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +1
Query: 517 STLCVDGSNGRSTCSGDSGGPLTIGNGG 600
S +C G G C GDSGGP GG
Sbjct: 242 SMICAGGM-GMGGCQGDSGGPFVCNEGG 268
>SB_33085| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 537
Score = 29.9 bits (64), Expect = 1.6
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +1
Query: 547 RSTCSGDSGGPLTIGNGG 600
++ CSGDSGGPL GG
Sbjct: 477 KAVCSGDSGGPLVCERGG 494
>SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 786
Score = 29.9 bits (64), Expect = 1.6
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +1
Query: 547 RSTCSGDSGGPLTIGNGG 600
++ CSGDSGGPL GG
Sbjct: 726 KAVCSGDSGGPLVCERGG 743
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = -3
Query: 599 PPLPMVRGPPESPLQVLRPLEPSTQRVEAMT 507
PPLP PP P+Q RP P+T +A T
Sbjct: 920 PPLP----PPPPPIQTTRPTVPTTPTTQAST 946
>SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = +1
Query: 508 VIASTLCVDGSNGR-STCSGDSGGPLTIGNG 597
+ A +C G TC GDSGGPL +G
Sbjct: 795 ISADMICAGNPEGGVDTCQGDSGGPLVCQHG 825
>SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44)
Length = 348
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/20 (60%), Positives = 12/20 (60%), Gaps = 1/20 (5%)
Frame = +1
Query: 520 TLCV-DGSNGRSTCSGDSGG 576
T C DG G TC GDSGG
Sbjct: 274 TFCAGDGKGGNDTCHGDSGG 293
>SB_32032| Best HMM Match : PAN (HMM E-Value=0.029)
Length = 610
Score = 29.1 bits (62), Expect = 2.9
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = +1
Query: 316 WLHQQHPAHQPSQWKQQLCWYLGLGCRLRK 405
W+++ HP H+ ++LC+ +G C R+
Sbjct: 457 WMNESHPRHEDGIVSRRLCYRVGGDCCARR 486
>SB_21575| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 696
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = +1
Query: 517 STLCV--DGSNGRSTCSGDSGGPLTIGNGG 600
S +CV + N S+C GDSGGPL G
Sbjct: 489 SHICVGFNTENAASSCQGDSGGPLVCEEEG 518
>SB_51536| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 347
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +1
Query: 535 GSNGRSTCSGDSGGPLTIGNG 597
G+ G C GDSGGPL G
Sbjct: 286 GAGGIDACQGDSGGPLVCKEG 306
>SB_56478| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 968
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/29 (44%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Frame = +1
Query: 517 STLCVD-GSNGRSTCSGDSGGPLTIGNGG 600
S LC G TC GDSGGP+ + G
Sbjct: 867 SMLCAGLDQGGIDTCQGDSGGPMVCESRG 895
>SB_56305| Best HMM Match : zf-C4 (HMM E-Value=0)
Length = 553
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/48 (31%), Positives = 19/48 (39%)
Frame = +1
Query: 430 QQPTKTPSEPPGHYQRRLRPHVWKQCVIASTLCVDGSNGRSTCSGDSG 573
Q P K+P PP RP V + C I G ++C G G
Sbjct: 173 QAPIKSPETPPSFSAASPRPVVNEICAICLDKATGQHYGVTSCEGCKG 220
>SB_43527| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 366
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = +1
Query: 508 VIASTLCV--DGSNGRSTCSGDSGGPLTIGN 594
V A+ C + S+ C GDSGGP ++ N
Sbjct: 288 VTANMFCAGFENSSRGDACQGDSGGPFSVDN 318
>SB_10598| Best HMM Match : LRR_1 (HMM E-Value=4.4e-19)
Length = 811
Score = 27.9 bits (59), Expect = 6.6
Identities = 16/54 (29%), Positives = 23/54 (42%)
Frame = +3
Query: 60 CWTCDRTDEWQNFHLRSSLLTNTRSVTAAHCWRTRRAQARQFTLALGTANIFSG 221
C C R + H R LT T+ + HC ++RRA T + A + G
Sbjct: 664 CPVCIRNKVPEPGHYRCDWLTGTK--LSRHCSKSRRAHKADVTFLVPPAEAYEG 715
>SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 330
Score = 27.9 bits (59), Expect = 6.6
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +1
Query: 544 GRSTCSGDSGGPLTIGNGG 600
G +C GDSGGP+ N G
Sbjct: 273 GIDSCQGDSGGPMVCENNG 291
>SB_47534| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 488
Score = 27.5 bits (58), Expect = 8.8
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -1
Query: 103 RWKFCHSSVRSQVQQDGGEHQRWRQNHP 20
RW + + ++++DG H RW NHP
Sbjct: 77 RWSLPWAVAQPRIEEDGPYHGRW-HNHP 103
Score = 27.5 bits (58), Expect = 8.8
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -1
Query: 103 RWKFCHSSVRSQVQQDGGEHQRWRQNHP 20
RW + + ++++DG H RW NHP
Sbjct: 165 RWSLPWAVAQPRIEEDGPYHGRW-HNHP 191
>SB_38755| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 471
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 278 LHNDVAIINHNHVGFTNNIQRINLASGSNN 367
++N+ IIN+N++ NNI N+ +NN
Sbjct: 393 INNNNIIINNNNIIINNNINNNNIIINNNN 422
>SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 620
Score = 27.5 bits (58), Expect = 8.8
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +3
Query: 93 NFHLRSSLLTNTRSVTAAHCWRTRRAQARQFTLALGTAN 209
NF SL+++T VTAAHC R + Q+ + +G N
Sbjct: 499 NFICGGSLVSSTWVVTAAHC-VARSSNPAQYQIIVGEHN 536
>SB_9601| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 285
Score = 27.5 bits (58), Expect = 8.8
Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +1
Query: 484 RPHVWKQCVIASTLCVDGSNG-RSTCSGDSGGPLTIGNGG 600
+P + + + LC G + +C DSGGPL GG
Sbjct: 195 KPLSYNGTIHETALCAGYERGLKDSCEFDSGGPLACQKGG 234
>SB_8561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/20 (55%), Positives = 12/20 (60%), Gaps = 1/20 (5%)
Frame = +1
Query: 520 TLCV-DGSNGRSTCSGDSGG 576
T C +G G TC GDSGG
Sbjct: 216 TFCAGEGKGGNDTCRGDSGG 235
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,986,906
Number of Sequences: 59808
Number of extensions: 357152
Number of successful extensions: 1522
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1316
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1517
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1451595000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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