Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0551
(589 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein. 24 0.83
U81038-1|AAB39355.1| 412|Tribolium castaneum transcription fact... 24 0.83
AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein. 24 0.83
AF243042-1|AAF68438.1| 126|Tribolium castaneum mutant transcrip... 24 0.83
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 23 2.5
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 23 2.5
AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein pr... 23 2.5
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 23 2.5
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 23 2.5
>U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein.
Length = 283
Score = 24.2 bits (50), Expect = 0.83
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +2
Query: 407 NDYVQPIRLQSSYHKDYNYDGYRLTATGWG 496
N ++Q +LQ YH NY+ + + G+G
Sbjct: 52 NHHIQQQQLQYGYHNHQNYNS-NVLSNGYG 80
Score = 21.4 bits (43), Expect = 5.8
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +2
Query: 188 SHHHPQRFGTHGCSLHCYSRNHIIRAGTVNMTRP 289
+++HPQ HG +H H IR ++ T+P
Sbjct: 83 NYYHPQLHSHHGPPIH-----HQIRPPILHDTQP 111
>U81038-1|AAB39355.1| 412|Tribolium castaneum transcription factor
Deformed protein.
Length = 412
Score = 24.2 bits (50), Expect = 0.83
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +2
Query: 407 NDYVQPIRLQSSYHKDYNYDGYRLTATGWG 496
N ++Q +LQ YH NY+ + + G+G
Sbjct: 52 NHHIQQQQLQYGYHNHQNYNS-NVLSNGYG 80
Score = 21.4 bits (43), Expect = 5.8
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +2
Query: 188 SHHHPQRFGTHGCSLHCYSRNHIIRAGTVNMTRP 289
+++HPQ HG +H H IR ++ T+P
Sbjct: 83 NYYHPQLHSHHGPPIH-----HQIRPPILHDTQP 111
>AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein.
Length = 412
Score = 24.2 bits (50), Expect = 0.83
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +2
Query: 407 NDYVQPIRLQSSYHKDYNYDGYRLTATGWG 496
N ++Q +LQ YH NY+ + + G+G
Sbjct: 52 NHHIQQQQLQYGYHNHQNYNS-NVLSNGYG 80
Score = 21.4 bits (43), Expect = 5.8
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +2
Query: 188 SHHHPQRFGTHGCSLHCYSRNHIIRAGTVNMTRP 289
+++HPQ HG +H H IR ++ T+P
Sbjct: 83 NYYHPQLHSHHGPPIH-----HQIRPPILHDTQP 111
>AF243042-1|AAF68438.1| 126|Tribolium castaneum mutant
transcription factor TcDfd1 protein.
Length = 126
Score = 24.2 bits (50), Expect = 0.83
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +2
Query: 407 NDYVQPIRLQSSYHKDYNYDGYRLTATGWG 496
N ++Q +LQ YH NY+ + + G+G
Sbjct: 52 NHHIQQQQLQYGYHNHQNYNS-NVLSNGYG 80
Score = 21.4 bits (43), Expect = 5.8
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +2
Query: 188 SHHHPQRFGTHGCSLHCYSRNHIIRAGTVNMTRP 289
+++HPQ HG +H H IR ++ T+P
Sbjct: 83 NYYHPQLHSHHGPPIH-----HQIRPPILHDTQP 111
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 22.6 bits (46), Expect = 2.5
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +3
Query: 486 PVGEEPGPWYRS*KYELG 539
PVG P WY+ +Y +G
Sbjct: 767 PVGSGPMVWYQMFEYAIG 784
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 22.6 bits (46), Expect = 2.5
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +3
Query: 486 PVGEEPGPWYRS*KYELG 539
PVG P WY+ +Y +G
Sbjct: 767 PVGSGPMVWYQMFEYAIG 784
>AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein
protein.
Length = 392
Score = 22.6 bits (46), Expect = 2.5
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = -1
Query: 133 GNCPSSASHPDTILAPALTFSTKVRAGSADTTATPAIATRS 11
G PSS+ + I P + +S +AGS T T + + S
Sbjct: 159 GYHPSSSYPANEISCPQVQWSATPQAGSTPTYQTQGLLSPS 199
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 22.6 bits (46), Expect = 2.5
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +3
Query: 486 PVGEEPGPWYRS*KYELG 539
PVG P WY+ +Y +G
Sbjct: 767 PVGSGPMVWYQMFEYAIG 784
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 22.6 bits (46), Expect = 2.5
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +3
Query: 486 PVGEEPGPWYRS*KYELG 539
PVG P WY+ +Y +G
Sbjct: 767 PVGSGPMVWYQMFEYAIG 784
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,408
Number of Sequences: 336
Number of extensions: 2915
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14726181
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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