Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0551
         (589 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like p...    42   3e-04
Z78013-9|CAB01420.2|  297|Caenorhabditis elegans Hypothetical pr...    30   1.4  
Z99942-6|CAI79199.1|  119|Caenorhabditis elegans Hypothetical pr...    29   1.9  
U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like p...    28   4.3  
AC006656-3|AAF39882.1|  549|Caenorhabditis elegans Hypothetical ...    28   5.7  
U41270-2|AAA82440.1|  298|Caenorhabditis elegans Cell-death-rela...    27   7.5  
AY303578-1|AAP57300.1|  298|Caenorhabditis elegans cell death-re...    27   7.5  
AL031627-16|CAA20968.1|  262|Caenorhabditis elegans Hypothetical...    27   7.5  
U70848-2|AAB09110.4|  313|Caenorhabditis elegans Trypsin-like pr...    27   9.9  
AL132848-5|CAB60389.2|  702|Caenorhabditis elegans Hypothetical ...    27   9.9  

>U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like
           protease protein 2 protein.
          Length = 265

 Score = 41.9 bits (94), Expect = 3e-04
 Identities = 23/60 (38%), Positives = 32/60 (53%)
 Frame = +3

Query: 90  ARIVSGWEAEEGQFPYQLSLRMVNPEGAVNACGATIIHSDSGLTAAHCTATRVTISSEPV 269
           AR+V G+E   G FP+  +LR  N     + CGA+I+     +TAAHC      +SS  V
Sbjct: 25  ARVVGGFETVPGAFPWTAALR--NKATKAHHCGASILDKTHLITAAHCFEEDERVSSYEV 82



 Score = 31.9 bits (69), Expect = 0.35
 Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
 Frame = +2

Query: 323 HPLYDESIQQIVQPHDIGLIKFGR-SLVFNDYVQPIRLQSSYHKDYNY-DGYRLTATGWG 496
           +PLY +     +  HDI +++     + FN+Y QPI L S   KD+ Y  G +   +GWG
Sbjct: 107 YPLYKD-----IFSHDIAILEIPYPGIEFNEYAQPICLPS---KDFVYTPGRQCVVSGWG 158


>Z78013-9|CAB01420.2|  297|Caenorhabditis elegans Hypothetical
           protein F15B9.5 protein.
          Length = 297

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 14/46 (30%), Positives = 22/46 (47%)
 Frame = +3

Query: 96  IVSGWEAEEGQFPYQLSLRMVNPEGAVNACGATIIHSDSGLTAAHC 233
           I++G+ A         S+    P+G  N CG  +I     +T+AHC
Sbjct: 17  IINGFSANSFDTLSLASVITRFPDGTTNVCGGVLIAPSIVITSAHC 62


>Z99942-6|CAI79199.1|  119|Caenorhabditis elegans Hypothetical
           protein H13N06.7 protein.
          Length = 119

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 14/48 (29%), Positives = 22/48 (45%)
 Frame = +1

Query: 253 YHQSRYSQHDTARRCFRDDRLFKPPTLRRIDTADCTTSRHRPHQVWTL 396
           Y   R ++      CF+  RL    + R  DT++C    + P + WTL
Sbjct: 38  YQMCRLTRKQHIGICFKSSRLENVKSCREADTSNCAAPEY-PTRKWTL 84


>U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like
           protease protein 1 protein.
          Length = 293

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 15/49 (30%), Positives = 30/49 (61%)
 Frame = +3

Query: 93  RIVSGWEAEEGQFPYQLSLRMVNPEGAVNACGATIIHSDSGLTAAHCTA 239
           R++ G E+    +P+  ++++++  G  + CG ++I  +  LTAAHC A
Sbjct: 57  RLIGGSESSPHSWPW--TVQLLSRLGH-HRCGGSLIDPNFVLTAAHCFA 102


>AC006656-3|AAF39882.1|  549|Caenorhabditis elegans Hypothetical
           protein H12I13.3 protein.
          Length = 549

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 11/21 (52%), Positives = 17/21 (80%), Gaps = 1/21 (4%)
 Frame = +2

Query: 299 FETTDY-LNHPLYDESIQQIV 358
           F+ +DY  NHPLYDES ++++
Sbjct: 450 FDFSDYPKNHPLYDESNKKVI 470


>U41270-2|AAA82440.1|  298|Caenorhabditis elegans Cell-death-related
           nuclease protein4 protein.
          Length = 298

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = +2

Query: 299 FETT-DYLNHPLYDESIQQIVQPHDIGLIKFGRSLVFNDYVQPI 427
           FETT D  N     E IQ  +  +D+   K    + FN YV+P+
Sbjct: 16  FETTSDAANQDYPCEVIQFAIVAYDVPNDKIREDISFNKYVKPV 59


>AY303578-1|AAP57300.1|  298|Caenorhabditis elegans cell
           death-related nuclease 4 protein.
          Length = 298

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = +2

Query: 299 FETT-DYLNHPLYDESIQQIVQPHDIGLIKFGRSLVFNDYVQPI 427
           FETT D  N     E IQ  +  +D+   K    + FN YV+P+
Sbjct: 16  FETTSDAANQDYPCEVIQFAIVAYDVPNDKIREDISFNKYVKPV 59


>AL031627-16|CAA20968.1|  262|Caenorhabditis elegans Hypothetical
           protein Y102A5C.27 protein.
          Length = 262

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
 Frame = +2

Query: 350 QIVQPHDIGLIKFGRSLVFNDYVQPIRL-QSSYHKDYNY---DGYRLTAT 487
           Q VQ +++    FG    F++   P+   +S+YH D+NY   + YR+ ++
Sbjct: 9   QAVQANNLNTDHFGTCGTFDNSRAPVTSHRSTYHNDHNYHYNNNYRIQSS 58


>U70848-2|AAB09110.4|  313|Caenorhabditis elegans Trypsin-like
           protease protein 3 protein.
          Length = 313

 Score = 27.1 bits (57), Expect = 9.9
 Identities = 16/47 (34%), Positives = 22/47 (46%)
 Frame = +3

Query: 93  RIVSGWEAEEGQFPYQLSLRMVNPEGAVNACGATIIHSDSGLTAAHC 233
           RI+ G   ++G   +   L      G    CGAT+I     +TAAHC
Sbjct: 37  RIIGGNSIDDGA-NWMAKLVSYGDNGQGILCGATVIDDFWLVTAAHC 82


>AL132848-5|CAB60389.2|  702|Caenorhabditis elegans Hypothetical
           protein Y47H10A.1 protein.
          Length = 702

 Score = 27.1 bits (57), Expect = 9.9
 Identities = 11/41 (26%), Positives = 20/41 (48%)
 Frame = +1

Query: 277 HDTARRCFRDDRLFKPPTLRRIDTADCTTSRHRPHQVWTLP 399
           H+  ++C  + RLF+ P     +++     R + H VW  P
Sbjct: 203 HEERQKCLDEKRLFEDPQFPANNSSIYVKVRPKDHIVWKRP 243


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,419,435
Number of Sequences: 27780
Number of extensions: 278269
Number of successful extensions: 699
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 673
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 697
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1237082886
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)