Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0551
         (589 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    39   4e-05
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             25   0.42 
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    23   1.7  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    23   2.9  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    23   2.9  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    22   3.9  
AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropi...    22   3.9  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    21   6.8  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 38.7 bits (86), Expect = 4e-05
 Identities = 23/74 (31%), Positives = 34/74 (45%)
 Frame = +2

Query: 281 TRPAVVFETTDYLNHPLYDESIQQIVQPHDIGLIKFGRSLVFNDYVQPIRLQSSYHKDYN 460
           T   V+      + HP YD   +   Q +DI L+K  + + F D V P  L   +  D +
Sbjct: 228 TNATVLHSINKVIIHPKYDIIEKDDWQINDIALLKTEKDIKFGDKVGPACLPFQHFLD-S 286

Query: 461 YDGYRLTATGWGRT 502
           + G  +T  GWG T
Sbjct: 287 FAGSDVTVLGWGHT 300



 Score = 35.5 bits (78), Expect = 4e-04
 Identities = 19/48 (39%), Positives = 24/48 (50%)
 Frame = +3

Query: 90  ARIVSGWEAEEGQFPYQLSLRMVNPEGAVNACGATIIHSDSGLTAAHC 233
           +RIV G      +FP    ++     G +  CGATII     LTAAHC
Sbjct: 159 SRIVGGTNTGINEFPMMAGIKRTYEPGMI--CGATIISKRYVLTAAHC 204


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 25.4 bits (53), Expect = 0.42
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = -1

Query: 121 SSASHPDTILAPALTFSTKVRAGSADTTATPAIATRSKT 5
           S+ SHP    APA T +T     +  TT T    T + T
Sbjct: 643 STHSHPHEPGAPATTITTITTTTTTTTTTTTTTTTPNTT 681


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +3

Query: 525 KYELGLPSRCDQRVLLRNFRN 587
           K ELG PSR  ++ L R F N
Sbjct: 538 KDELGKPSRISKQGLFRRFYN 558


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 11/39 (28%), Positives = 21/39 (53%)
 Frame = -1

Query: 220 VSPESLWMMVAPQALTAPSGFTMRSDSW*GNCPSSASHP 104
           VS E   + + P+  +  +GF ++S  + G+C S  + P
Sbjct: 364 VSVEQPHLFLYPEVSSTYTGFGIQSTDFVGDCSSLLNLP 402


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
 Frame = +2

Query: 239 YSRNHIIRAGTVNMTRPAVVFETTDY-LNHPLYDESIQQIVQPHDIGL 379
           + R  I+ +G +N T+P    +   + LN       ++Q+V PHDI +
Sbjct: 136 FDRLWILDSGIINNTQPMCSPKLHVFDLNT---SHQLKQVVMPHDIAV 180



 Score = 22.2 bits (45), Expect = 3.9
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +1

Query: 280 DTARRCFRDDRLFKPPTLRRIDTADCTTSRHR 375
           DT  R  R DR+ +   + R+DT D T    R
Sbjct: 481 DTMDRMDRMDRMDRMDRMDRMDTMDRTDKMSR 512


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 9/18 (50%), Positives = 13/18 (72%), Gaps = 2/18 (11%)
 Frame = +2

Query: 224 CSLHCYSRNHI--IRAGT 271
           C L+CY++ H+  IRA T
Sbjct: 213 CRLYCYAQKHVKSIRAVT 230


>AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropin
           releasing hormone-binding protein protein.
          Length = 332

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 9/34 (26%), Positives = 16/34 (47%)
 Frame = +3

Query: 96  IVSGWEAEEGQFPYQLSLRMVNPEGAVNACGATI 197
           I+ GWE     FP ++  ++   + +   CG  I
Sbjct: 123 IIDGWELNGEVFPSKMDHQLPLKQRSSEFCGKNI 156


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -1

Query: 565 TRWSHLEGRPNSYFQERY 512
           T W+  EGR   YF + Y
Sbjct: 178 TGWTFHEGRKQFYFHQFY 195


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,517
Number of Sequences: 438
Number of extensions: 3708
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17115420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)