Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0550
         (403 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000ECCBB3 Cluster: UPI0000ECCBB3 related cluster; n...    34   1.2  
UniRef50_A5BDX8 Cluster: Putative uncharacterized protein; n=1; ...    32   3.7  
UniRef50_A6DTA0 Cluster: Putative uncharacterized protein; n=1; ...    31   8.5  

>UniRef50_UPI0000ECCBB3 Cluster: UPI0000ECCBB3 related cluster; n=1;
           Gallus gallus|Rep: UPI0000ECCBB3 UniRef100 entry -
           Gallus gallus
          Length = 673

 Score = 33.9 bits (74), Expect = 1.2
 Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
 Frame = +2

Query: 158 HSSVPICILFWQMCNEHKILKFL*LVLNGKSWYLV--RNVTILGALTICIHVFILXIKRI 331
           H++ P+ + FW M  E+KI      +L G  W LV  +  + L +L  C    +L + +I
Sbjct: 460 HAAHPLLVGFWLMLRENKISVLFIFLLCGIGWPLVFMQEGSDLASLADCFIFSVLPLTQI 519

Query: 332 IMYYLGT 352
              YL +
Sbjct: 520 CFNYLAS 526


>UniRef50_A5BDX8 Cluster: Putative uncharacterized protein; n=1; Vitis
            vinifera|Rep: Putative uncharacterized protein - Vitis
            vinifera (Grape)
          Length = 1242

 Score = 32.3 bits (70), Expect = 3.7
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = +1

Query: 148  SHNTFFRPHMYTFLANV*RT*NFEISVTRPKWQ 246
            S N  F+P +YTF  NV     F+ +++ PKW+
Sbjct: 974  SKNGIFKPKVYTFDLNVEEPNTFQEAISHPKWK 1006


>UniRef50_A6DTA0 Cluster: Putative uncharacterized protein; n=1;
           Lentisphaera araneosa HTCC2155|Rep: Putative
           uncharacterized protein - Lentisphaera araneosa HTCC2155
          Length = 834

 Score = 31.1 bits (67), Expect = 8.5
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +2

Query: 245 KSWYLVRNVTILGALTICIHVFILXIK 325
           K+W++ R V  L  +T+CI + IL IK
Sbjct: 4   KTWHIFRGVFSLAGMTLCILILILEIK 30


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 353,759,308
Number of Sequences: 1657284
Number of extensions: 6739598
Number of successful extensions: 14107
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13834
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14090
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 17349842203
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)