Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0550
         (403 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021962-1|AAX94783.1|  901|Drosophila melanogaster LD03464p pro...    28   5.4  
AE013599-1446|AAM68665.1|  837|Drosophila melanogaster CG8841-PC...    28   5.4  
AE013599-1445|AAM68664.1|  837|Drosophila melanogaster CG8841-PB...    28   5.4  
AE013599-1444|AAF58533.1|  837|Drosophila melanogaster CG8841-PA...    28   5.4  
AE014297-739|AAF54225.1|  397|Drosophila melanogaster CG7454-PA ...    27   9.4  

>BT021962-1|AAX94783.1|  901|Drosophila melanogaster LD03464p
           protein.
          Length = 901

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +2

Query: 140 NRTRITHSSVPICILFWQMCNEHKILKFL*LVL 238
           N T+  H    + ILFW++C+ +K  KFL  VL
Sbjct: 408 NSTKRLHCHQELLILFWKICDYNK--KFLYFVL 438


>AE013599-1446|AAM68665.1|  837|Drosophila melanogaster CG8841-PC,
           isoform C protein.
          Length = 837

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +2

Query: 140 NRTRITHSSVPICILFWQMCNEHKILKFL*LVL 238
           N T+  H    + ILFW++C+ +K  KFL  VL
Sbjct: 344 NSTKRLHCHQELLILFWKICDYNK--KFLYFVL 374


>AE013599-1445|AAM68664.1|  837|Drosophila melanogaster CG8841-PB,
           isoform B protein.
          Length = 837

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +2

Query: 140 NRTRITHSSVPICILFWQMCNEHKILKFL*LVL 238
           N T+  H    + ILFW++C+ +K  KFL  VL
Sbjct: 344 NSTKRLHCHQELLILFWKICDYNK--KFLYFVL 374


>AE013599-1444|AAF58533.1|  837|Drosophila melanogaster CG8841-PA,
           isoform A protein.
          Length = 837

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +2

Query: 140 NRTRITHSSVPICILFWQMCNEHKILKFL*LVL 238
           N T+  H    + ILFW++C+ +K  KFL  VL
Sbjct: 344 NSTKRLHCHQELLILFWKICDYNK--KFLYFVL 374


>AE014297-739|AAF54225.1|  397|Drosophila melanogaster CG7454-PA
           protein.
          Length = 397

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
 Frame = +2

Query: 20  PKRAKPYDRLCYSTDNETFNTYFFETPYGICAIG-RPFKQMNRTRI-THSSVPI 175
           P R KPY  L Y          F   PYG+   G + FK    T + T+  VP+
Sbjct: 36  PPRTKPYWWLYYIWTLVVIVLVFIFIPYGLIMTGIKEFKNFTTTDLFTYVQVPV 89


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,700,469
Number of Sequences: 53049
Number of extensions: 311201
Number of successful extensions: 470
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 467
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 470
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1170601320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)