Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0550
         (403 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g24360.1 68418.m02872 protein kinase family protein / Ire1 ho...    27   3.5  
At3g02670.1 68416.m00258 proline-rich family protein contains pr...    26   8.2  

>At5g24360.1 68418.m02872 protein kinase family protein / Ire1
           homolog-1 (IRE1-1) identical to Ire1 homolog-1
           [Arabidopsis thaliana] GI:15277137; cDNA Ire1 homolog-1
           GI:15277136;
          Length = 881

 Score = 27.5 bits (58), Expect = 3.5
 Identities = 13/30 (43%), Positives = 20/30 (66%)
 Frame = -3

Query: 296 KSSKLLE*LRFLLNTKICHLGRVTEISKFY 207
           + S LL+ + FLL + + H  + +EISKFY
Sbjct: 2   RGSALLDLILFLLVSPLAHSFKGSEISKFY 31


>At3g02670.1 68416.m00258 proline-rich family protein contains
           proline rich extensin domains, INTERPRO:IPR002965
          Length = 217

 Score = 26.2 bits (55), Expect = 8.2
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +2

Query: 14  LSPKRAKPYDRLCYSTDNETFNTYFFETPY 103
           L+   AKP DR+  +T NE  N  F   P+
Sbjct: 28  LNDADAKPVDRVVTTTTNEANNLAFVSDPF 57


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,718,221
Number of Sequences: 28952
Number of extensions: 152858
Number of successful extensions: 380
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 374
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 380
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 585758608
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)