Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0546
(621 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_01_0044 - 583349-584044 31 0.74
12_02_0642 + 21454142-21454251,21454683-21454872,21454988-214550... 31 0.97
12_02_0639 + 21443480-21443589,21444022-21444211,21444327-214444... 31 0.97
12_02_0633 + 21402847-21402862,21403143-21404975,21405052-214051... 31 0.97
10_08_0848 + 21035446-21035461,21035742-21036233,21036400-210369... 31 0.97
05_03_0187 + 9413575-9414895,9415014-9415289,9415513-9415631,941... 31 0.97
05_03_0065 - 7953414-7953845,7953963-7954081,7954158-7955990,795... 31 0.97
01_06_0544 + 30118208-30118417,30118959-30119063,30119179-301192... 31 0.97
01_04_0076 + 15780981-15780996,15781277-15783109,15783186-157833... 31 0.97
10_08_1020 - 22309900-22310361,22310455-22310697,22311164-22311223 29 2.3
02_04_0202 - 20876793-20877142,20877380-20879512,20884063-20884732 29 2.3
12_02_1175 + 26702744-26704507 29 3.0
09_04_0038 - 13996505-13996836,13997047-13997077,13997307-139974... 29 3.9
04_03_0452 - 16052449-16052856,16053017-16053321,16053383-16054334 29 3.9
04_03_0052 + 10257109-10257337,10257580-10257668,10257708-102582... 29 3.9
02_05_1336 + 35773629-35773856,35773931-35774085,35774217-357745... 29 3.9
01_01_0410 - 3090744-3091022,3091100-3091630 29 3.9
10_01_0308 - 3413275-3413529 28 5.2
07_03_1483 + 26881032-26882035,26882130-26882204,26882324-268828... 28 5.2
05_05_0390 - 24593985-24595205,24595790-24595867,24596234-24596980 28 5.2
02_04_0426 - 22802143-22802667,22804929-22805129 28 5.2
10_06_0012 - 9586478-9588880 28 6.9
07_01_0452 - 3418572-3418763,3419140-3419223 28 6.9
11_06_0621 + 25587476-25587604,25588230-25588423,25588800-255888... 27 9.1
08_01_0461 - 4063614-4064375,4064439-4066017,4066041-4066086,406... 27 9.1
03_06_0252 - 32656068-32656276,32656361-32656550,32656682-326567... 27 9.1
02_05_0114 + 25958834-25961296 27 9.1
02_01_0308 + 2064510-2065613 27 9.1
01_01_0081 + 623135-623470 27 9.1
>10_01_0044 - 583349-584044
Length = 231
Score = 31.1 bits (67), Expect = 0.74
Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Frame = -2
Query: 521 LDPNSASVVDEPDQKVAKELSDTGNSIDGSVV*TVGKTTPVHNNNVAVGDGQQGGADH-- 348
+ +VV + +V ++ TG+S DG + +G + N G Q+ DH
Sbjct: 65 MQTRKGTVVQKYQVRVVADVPGTGSSKDGEMKQALGGSAQPSNKGATNGSAQENQGDHSQ 124
Query: 347 GVH 339
GVH
Sbjct: 125 GVH 127
>12_02_0642 +
21454142-21454251,21454683-21454872,21454988-21455069,
21455224-21455802,21455854-21456909,21457133-21457251,
21457369-21457812
Length = 859
Score = 30.7 bits (66), Expect = 0.97
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +2
Query: 299 CYCPRLEQQRKLRCEHHDPPRLAGRLRLQRYCCGL 403
C+CP + ++ LRC++ D AG R++ + G+
Sbjct: 157 CFCPDITKKHHLRCKYCDKVCTAGITRIKYHLAGI 191
>12_02_0639 +
21443480-21443589,21444022-21444211,21444327-21444408,
21444563-21445054,21445221-21446246,21446470-21446588,
21446706-21447149
Length = 820
Score = 30.7 bits (66), Expect = 0.97
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +2
Query: 299 CYCPRLEQQRKLRCEHHDPPRLAGRLRLQRYCCGL 403
C+CP + ++ LRC++ D AG R++ + G+
Sbjct: 157 CFCPDITKKHHLRCKYCDKVCTAGITRIKYHLAGI 191
>12_02_0633 +
21402847-21402862,21403143-21404975,21405052-21405170,
21405288-21405722
Length = 800
Score = 30.7 bits (66), Expect = 0.97
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +2
Query: 299 CYCPRLEQQRKLRCEHHDPPRLAGRLRLQRYCCGL 403
C+CP + ++ LRC++ D AG R++ + G+
Sbjct: 35 CFCPDITKKHHLRCKYCDKVCTAGITRIKYHLAGI 69
>10_08_0848 +
21035446-21035461,21035742-21036233,21036400-21036956,
21037084-21037539,21037886-21038302
Length = 645
Score = 30.7 bits (66), Expect = 0.97
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +2
Query: 299 CYCPRLEQQRKLRCEHHDPPRLAGRLRLQRYCCGL 403
C+CP + ++ LRC++ D AG R++ + G+
Sbjct: 35 CFCPDITKKHHLRCKYCDKVCTAGITRIKYHLAGI 69
>05_03_0187 +
9413575-9414895,9415014-9415289,9415513-9415631,
9415749-9416192
Length = 719
Score = 30.7 bits (66), Expect = 0.97
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +2
Query: 299 CYCPRLEQQRKLRCEHHDPPRLAGRLRLQRYCCGL 403
C+CP + ++ LRC++ D AG R++ + G+
Sbjct: 39 CFCPDITKKHHLRCKYCDKVCTAGITRIKYHLAGI 73
>05_03_0065 -
7953414-7953845,7953963-7954081,7954158-7955990,
7957103-7957559
Length = 946
Score = 30.7 bits (66), Expect = 0.97
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +2
Query: 299 CYCPRLEQQRKLRCEHHDPPRLAGRLRLQRYCCGL 403
C+CP + ++ LRC++ D AG R++ + G+
Sbjct: 182 CFCPDITKKHHLRCKYCDKVCTAGITRIKYHLAGI 216
>01_06_0544 +
30118208-30118417,30118959-30119063,30119179-30119260,
30119415-30121250,30121327-30121445,30121563-30122006
Length = 931
Score = 30.7 bits (66), Expect = 0.97
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +2
Query: 299 CYCPRLEQQRKLRCEHHDPPRLAGRLRLQRYCCGL 403
C+CP + ++ LRC++ D AG R++ + G+
Sbjct: 162 CFCPDITKKHHLRCKYCDKVCTAGITRIKYHLAGI 196
>01_04_0076 +
15780981-15780996,15781277-15783109,15783186-15783304,
15783422-15783724
Length = 756
Score = 30.7 bits (66), Expect = 0.97
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +2
Query: 299 CYCPRLEQQRKLRCEHHDPPRLAGRLRLQRYCCGL 403
C+CP + ++ LRC++ D AG R++ + G+
Sbjct: 35 CFCPDITKKHHLRCKYCDKVCTAGITRIKYHLAGI 69
>10_08_1020 - 22309900-22310361,22310455-22310697,22311164-22311223
Length = 254
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = -3
Query: 574 SSSVTDNVRAQAEANQVDSTPIPPPLLMSQTKK-LPRNCP 458
S+S +DN + A+ + STP PPP L + +K +P P
Sbjct: 207 STSDSDNSTSPAKRSFTPSTPPPPPTLPPKRRKGIPHRAP 246
>02_04_0202 - 20876793-20877142,20877380-20879512,20884063-20884732
Length = 1050
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/59 (27%), Positives = 27/59 (45%)
Frame = +3
Query: 219 PKQPSSYYKWQCNSIRNSNYNGNLPLFVIVHGWNSNGNSAVNTMIRPALLAVSDCNVIV 395
PK+ SS I +N +G LPL + G N + N ++ P ++ +C +V
Sbjct: 371 PKEISSLMNLNILHIDQNNLSGELPLGLCAGGQLQNFTAQDNNLVGPLPTSLLNCKTLV 429
>12_02_1175 + 26702744-26704507
Length = 587
Score = 29.1 bits (62), Expect = 3.0
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = -3
Query: 523 DSTPIPPPLLMSQTKKLPRNCP-TLGTPLTAVLYRPLARPRQSTTITLQSETASK 362
D PPPL +S + K P + P T L +L+ PL PR+ T + + SK
Sbjct: 308 DDDASPPPLPVSSSSK-PTSAPRTFARRLVDLLHSPLYLPRRLTIPDIAAHRWSK 361
>09_04_0038 -
13996505-13996836,13997047-13997077,13997307-13997420,
13997546-13997686,13997787-13997851,13997943-13998039,
13998096-13998257,13998360-13998473,14001263-14001311,
14001967-14002047,14003504-14003561,14003671-14004031,
14004129-14004213,14004320-14004591,14004712-14004914,
14005419-14005494
Length = 746
Score = 28.7 bits (61), Expect = 3.9
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 5/42 (11%)
Frame = -3
Query: 610 KPVTLVGSATSL-----SSSVTDNVRAQAEANQVDSTPIPPP 500
KP+++V ATSL SS+V NV + V T +PPP
Sbjct: 274 KPISVVSQATSLPRSASSSNVDSNVTKSSGPLVVPPTSLPPP 315
>04_03_0452 - 16052449-16052856,16053017-16053321,16053383-16054334
Length = 554
Score = 28.7 bits (61), Expect = 3.9
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 9/64 (14%)
Frame = +1
Query: 376 PTATLLLWT--GVVLPTVYTTLPSMEFPV---SDSSLAT----FWSGSSTTEAELGSSPL 528
P +T+L+WT G ++ VYTT+P P+ +++++AT S + TEA+ G S
Sbjct: 19 PASTMLVWTQVGEIVFPVYTTMPISTCPLMTGNENAVATNRDDSMSKDTPTEAKNGISTT 78
Query: 529 DWLQ 540
L+
Sbjct: 79 SELE 82
>04_03_0052 +
10257109-10257337,10257580-10257668,10257708-10258289,
10258477-10258668,10259392-10259563,10260190-10260461,
10260682-10260801,10260912-10260968,10261631-10261831,
10262451-10262511,10262712-10263013
Length = 758
Score = 28.7 bits (61), Expect = 3.9
Identities = 16/60 (26%), Positives = 24/60 (40%)
Frame = -2
Query: 521 LDPNSASVVDEPDQKVAKELSDTGNSIDGSVV*TVGKTTPVHNNNVAVGDGQQGGADHGV 342
++ +VV + K+ ++ TG+S DG V TT G G G GV
Sbjct: 685 METRKGTVVQKYKVKLVADVPGTGSSKDGEVQQVSAGTTESGGKGAVEGSGDNGDRSQGV 744
>02_05_1336 +
35773629-35773856,35773931-35774085,35774217-35774549,
35774615-35774927,35776992-35777168,35777281-35777397,
35777532-35777698,35777800-35778024,35778127-35778448,
35778542-35778786,35778993-35779131,35779212-35779304,
35779509-35779577
Length = 860
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +2
Query: 308 PRLEQQRKLRCEHHDPPRLAGRLRLQRYCCGLAWSCQRSIQHCRQWS 448
P L +Q E +P R+ R + ++ C L W+ S+Q +WS
Sbjct: 812 PTLGEQPAQPTESAEPNRIIPRPKERQDCNQLTWTTAPSLQFLNRWS 858
>01_01_0410 - 3090744-3091022,3091100-3091630
Length = 269
Score = 28.7 bits (61), Expect = 3.9
Identities = 19/61 (31%), Positives = 24/61 (39%), Gaps = 1/61 (1%)
Frame = +1
Query: 361 PCWPSPTATLLLWTGVVLPT-VYTTLPSMEFPVSDSSLATFWSGSSTTEAELGSSPLDWL 537
P W S T L LW G PT L S ++ L F +G +LG + L
Sbjct: 93 PSWTSTTENLYLWCGGWRPTAALHLLYSKSGAQLETQLPVFLAGGGLGAGDLGDLSAEQL 152
Query: 538 Q 540
Q
Sbjct: 153 Q 153
>10_01_0308 - 3413275-3413529
Length = 84
Score = 28.3 bits (60), Expect = 5.2
Identities = 20/68 (29%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Frame = +2
Query: 146 KRPRKTSLCQGTVQTTNTGFSPDVTKTTIKLLQMAM*LYPELELQW--KPASLCYCPRLE 319
KR K ++ GT + S +V +T ++LL+ + +PE++++W + A+ Y P
Sbjct: 9 KRAAKLAMEMGTDKVIIGIDSLEVVRTIVQLLEDRLKRFPEIKIKWVQQSANKAY-PFSS 67
Query: 320 QQRKL-RC 340
++R L RC
Sbjct: 68 KERTLNRC 75
>07_03_1483 +
26881032-26882035,26882130-26882204,26882324-26882861,
26883999-26884895,26885178-26885327,26885459-26885791,
26886501-26886695,26887805-26887918
Length = 1101
Score = 28.3 bits (60), Expect = 5.2
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = -3
Query: 616 DPKPVTLVGSATSLSSSVTDNVRAQAEANQVDSTPIPPPLLMSQTKKLPRNCPTLG 449
D KP V + + ++ V ++ A ST I P TK +P NC T+G
Sbjct: 191 DTKPDHTVATVVTCATLVVSSMELVAIDGTTGSTNIDTP---DSTKAMPANCSTVG 243
>05_05_0390 - 24593985-24595205,24595790-24595867,24596234-24596980
Length = 681
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = -3
Query: 526 VDSTPIPPPLLMSQTKKLPRNCPTLGTPLTAVLYRPLARPR 404
++ P+PPP MSQ +P N G P A + P P+
Sbjct: 557 LNQMPVPPPQFMSQ-GGMPSNPMAFGGPTMAQMNPPFGPPQ 596
>02_04_0426 - 22802143-22802667,22804929-22805129
Length = 241
Score = 28.3 bits (60), Expect = 5.2
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = -1
Query: 600 PLLGLPPACRPALPTT--CAPKLKPIKWTRPQFRLRC**ARPKSCQGTVRHW 451
PLL LPP+C+ LPT+ P + P+ P F L C G +R W
Sbjct: 28 PLL-LPPSCQARLPTSSPVMPPVTPLSPPPPCFALSRPTYMRGYCFGKLRDW 78
>10_06_0012 - 9586478-9588880
Length = 800
Score = 27.9 bits (59), Expect = 6.9
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +3
Query: 315 WNSNGNSAVNTMIRPALLAVSDCNVIVVDWRGLANGLYNTAVN 443
W++NG + V P L SD N++++D + N +++T VN
Sbjct: 78 WSANGENPVVDPASPELAISSDGNMVILD-QVTKNIIWSTHVN 119
>07_01_0452 - 3418572-3418763,3419140-3419223
Length = 91
Score = 27.9 bits (59), Expect = 6.9
Identities = 17/39 (43%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = -3
Query: 478 KLPRNCPTLGTPL---TAVLYRPLARPRQSTTITLQSET 371
KL NCPT G P T L +PL R + T L S T
Sbjct: 42 KLKINCPTTGLPSVDHTNHLIKPLGCARDANTTALYSTT 80
>11_06_0621 +
25587476-25587604,25588230-25588423,25588800-25588874,
25589434-25591852
Length = 938
Score = 27.5 bits (58), Expect = 9.1
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = +2
Query: 146 KRPRKTSLCQGTVQTTNTGFSPDVTKTTIKL 238
K R CQ VQ TN G PDV T+ L
Sbjct: 774 KAGRLQEACQLFVQMTNLGIKPDVIAYTVLL 804
>08_01_0461 -
4063614-4064375,4064439-4066017,4066041-4066086,
4066416-4066933,4067435-4067694,4068089-4068594,
4068667-4071319
Length = 2107
Score = 27.5 bits (58), Expect = 9.1
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = +3
Query: 12 WLNSIVFWQCYPHDPWRQQSL 74
WL+S +F CYP P+ ++++
Sbjct: 769 WLSSFLFNSCYPSGPYERRTI 789
>03_06_0252 -
32656068-32656276,32656361-32656550,32656682-32656780,
32656917-32657012,32657200-32658153,32658476-32658694,
32658911-32659120,32659241-32659503,32659605-32661281,
32663639-32663792
Length = 1356
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = -1
Query: 591 GLPPACRPALPTTCAPKLKPIKWTRPQFRLR 499
G+ P C PALP LK W F ++
Sbjct: 902 GISPDCSPALPVAIVGALKKYNWGALSFDIK 932
>02_05_0114 + 25958834-25961296
Length = 820
Score = 27.5 bits (58), Expect = 9.1
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = +2
Query: 146 KRPRKTSLCQGTVQTTNTGFSPDVTKTTIKL 238
K R CQ VQ TN G PDV T+ L
Sbjct: 656 KAGRLQEACQLFVQMTNLGIKPDVIAYTVLL 686
>02_01_0308 + 2064510-2065613
Length = 367
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = -3
Query: 514 PIPPPLLMSQTKKLPRNCPTLGTP 443
P PPPL M +LPR C T P
Sbjct: 46 PPPPPLAMVVDARLPRPCITFCAP 69
>01_01_0081 + 623135-623470
Length = 111
Score = 27.5 bits (58), Expect = 9.1
Identities = 21/79 (26%), Positives = 33/79 (41%)
Frame = -3
Query: 619 PDPKPVTLVGSATSLSSSVTDNVRAQAEANQVDSTPIPPPLLMSQTKKLPRNCPTLGTPL 440
P +P+ L +A S+ R A+ + P PP + T P CPT +
Sbjct: 2 PSLRPILLAAAAAVAVVSLWPAARVVADIDPSSGMPSPP----ATTSPFP-FCPTTPAGI 56
Query: 439 TAVLYRPLARPRQSTTITL 383
+ + P A P +TT T+
Sbjct: 57 STQPF-PWAEPSPTTTTTM 74
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,118,266
Number of Sequences: 37544
Number of extensions: 480585
Number of successful extensions: 1951
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1867
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1950
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1502076244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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