Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0546
(621 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_30050| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 3e-06
SB_7713| Best HMM Match : Lipase (HMM E-Value=0.0064) 45 6e-05
SB_26408| Best HMM Match : Lipase (HMM E-Value=0) 35 0.061
SB_32407| Best HMM Match : WSC (HMM E-Value=0.0008) 32 0.33
SB_27857| Best HMM Match : Cadherin (HMM E-Value=0) 32 0.33
SB_13183| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.43
SB_43441| Best HMM Match : Lipase (HMM E-Value=8.19998e-41) 31 0.57
SB_37296| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.00
SB_19823| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_18756| Best HMM Match : Sterol_desat (HMM E-Value=0) 29 2.3
SB_6891| Best HMM Match : Bac_chlorC (HMM E-Value=3.7) 29 4.0
SB_15037| Best HMM Match : zf-LSD1 (HMM E-Value=6.5) 29 4.0
SB_6592| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_28019| Best HMM Match : KNOX2 (HMM E-Value=0.24) 28 5.3
SB_884| Best HMM Match : KNOX2 (HMM E-Value=0.24) 28 5.3
SB_39797| Best HMM Match : VWA (HMM E-Value=6e-26) 28 5.3
SB_40963| Best HMM Match : Collagen (HMM E-Value=2.2e-09) 28 7.0
SB_24276| Best HMM Match : Extensin_2 (HMM E-Value=2.1e-05) 28 7.0
SB_40954| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_39747| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_28160| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_208| Best HMM Match : zf-C2H2 (HMM E-Value=1.7) 27 9.3
SB_48920| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.3
SB_32520| Best HMM Match : G_glu_transpept (HMM E-Value=4.9e-12) 27 9.3
>SB_30050| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 161
Score = 49.2 bits (112), Expect = 3e-06
Identities = 24/67 (35%), Positives = 37/67 (55%)
Frame = +3
Query: 261 IRNSNYNGNLPLFVIVHGWNSNGNSAVNTMIRPALLAVSDCNVIVVDWRGLANGLYNTAV 440
++ S Y+G FVI HG+ +G+++ +R ALL D NV++ DW A+G+Y A
Sbjct: 93 LKASTYDGKKRTFVIAHGYTESGSTSWVGHMRQALLQKDDVNVVITDWGPGADGMYWQAT 152
Query: 441 NGVPSVG 461
VG
Sbjct: 153 ANTRLVG 159
>SB_7713| Best HMM Match : Lipase (HMM E-Value=0.0064)
Length = 131
Score = 44.8 bits (101), Expect = 6e-05
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Frame = +3
Query: 264 RNSN-YNGNLPLFVIVHGWNSNGNSAVNTMIRPALLAVSDCNVIVVDWRGLANG--LYNT 434
RNS + G+ L +I+HG+ +GN + ++R LL NVI VDW+ A+G LY+
Sbjct: 14 RNSTAFRGDRKLVLIIHGFMQSGNVSWIRVMRDELLKREPMNVITVDWQSGADGLNLYHV 73
Query: 435 AVNGVPSVGQFLGNFL 482
A VG L +
Sbjct: 74 AAGNTRVVGAQLAELI 89
Score = 37.1 bits (82), Expect = 0.011
Identities = 16/24 (66%), Positives = 18/24 (75%)
Frame = +2
Query: 518 RVHLIGFSLGAHVVGNAGRQAGGR 589
RVHLIG SLGAHV G AG + G+
Sbjct: 102 RVHLIGHSLGAHVAGYAGERLSGK 125
>SB_26408| Best HMM Match : Lipase (HMM E-Value=0)
Length = 714
Score = 34.7 bits (76), Expect = 0.061
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +2
Query: 473 QLFGLAHQQRRRNWGRVHLIGFSLGAHVVGNAGRQ 577
+L + ++ R VH+IGFS GAHV G GR+
Sbjct: 175 RLLQILEERSGRKLAYVHVIGFSFGAHVAGYVGRR 209
>SB_32407| Best HMM Match : WSC (HMM E-Value=0.0008)
Length = 832
Score = 32.3 bits (70), Expect = 0.33
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +2
Query: 92 DTFGCLMARVFLTSLTWKKRPRKTSLCQGTVQTTNTGFSPDVTKTTIKL 238
+T G L VF+ L K+P K S Q T QTT T S + ++ + +
Sbjct: 641 ETGGVLANSVFVIRLGNSKQPHKASHSQTTAQTTQTSSSSEASQNSFSI 689
>SB_27857| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 2418
Score = 32.3 bits (70), Expect = 0.33
Identities = 33/103 (32%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Frame = -2
Query: 521 LDPNSASVVDEPDQKVAKELSDTGNSIDGSVV*TVGKTTPVHNNNVAVGDGQQ-----GG 357
+D N S +P Q + E+S+ N S+V TV T N + DG+ GG
Sbjct: 469 VDENKNSPRFDPQQAIL-EISE--NLKQNSLVTTVSATDSDSVGNPSSPDGKVVYSIVGG 525
Query: 356 ADHGV-----HSG-VSVAVPAVDNNKERQVSIVVRVPDRVTLP 246
GV ++G V VAVP++D Q ++VV+ D T P
Sbjct: 526 TGLGVFRVDSNTGEVKVAVPSLDREGTSQYTLVVKASDNATFP 568
>SB_13183| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 500
Score = 31.9 bits (69), Expect = 0.43
Identities = 13/47 (27%), Positives = 25/47 (53%)
Frame = +2
Query: 32 LAMLSP*SLETTVTMWKV*ADTFGCLMARVFLTSLTWKKRPRKTSLC 172
L+++ S + T+ ++ FGC A ++ + W K+P + SLC
Sbjct: 87 LSLVGVASFQAPTTLTRLVLLAFGCGAAMLWFCGIVWSKKPSERSLC 133
>SB_43441| Best HMM Match : Lipase (HMM E-Value=8.19998e-41)
Length = 291
Score = 31.5 bits (68), Expect = 0.57
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +2
Query: 506 RNWGRVHLIGFSLGAHVVGNAGRQ 577
R G H IGFSLGAH+ G G++
Sbjct: 168 REGGAFHSIGFSLGAHISGYVGQR 191
Score = 28.7 bits (61), Expect = 4.0
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = +3
Query: 351 IRPALLAVSDCNVIVVDWRGLANGLYNTAVNGVPSVGQFLGNFLVWLINNGG 506
++ LL SD NVI+VDW A Y AV VG + F+ +++ G
Sbjct: 115 MKDELLRKSDDNVIIVDWIRGAKIPYVRAVANTRLVGAQVAAFMKTILSLSG 166
>SB_37296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 476
Score = 30.7 bits (66), Expect = 1.00
Identities = 19/53 (35%), Positives = 23/53 (43%)
Frame = -2
Query: 380 VGDGQQGGADHGVHSGVSVAVPAVDNNKERQVSIVVRVPDRVTLPFVIT*WLF 222
VG GGA G VS A +N K R P +TL +V T WL+
Sbjct: 392 VGGAGVGGAGVGGAGVVSEVRHAAENRKHLLGVAFARAPADITLKYVATVWLY 444
>SB_19823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 940
Score = 29.9 bits (64), Expect = 1.7
Identities = 18/52 (34%), Positives = 22/52 (42%)
Frame = +3
Query: 351 IRPALLAVSDCNVIVVDWRGLANGLYNTAVNGVPSVGQFLGNFLVWLINNGG 506
IR AL+ D NVI DW A Y A VG + + +L N G
Sbjct: 632 IRHALIKQEDANVITTDWSRGATIPYEQATANTRMVGAQITELIKFLNNQTG 683
Score = 29.9 bits (64), Expect = 1.7
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +2
Query: 524 HLIGFSLGAHVVGNAGRQ 577
+L+GFSLGAH+ G GR+
Sbjct: 690 YLVGFSLGAHISGYVGRR 707
>SB_18756| Best HMM Match : Sterol_desat (HMM E-Value=0)
Length = 672
Score = 29.5 bits (63), Expect = 2.3
Identities = 20/74 (27%), Positives = 29/74 (39%)
Frame = -3
Query: 619 PDPKPVTLVGSATSLSSSVTDNVRAQAEANQVDSTPIPPPLLMSQTKKLPRNCPTLGTPL 440
P P+P+ + S ++ + V Q+ + P+ PP Q PRN P
Sbjct: 31 PVPRPIISANTFKMASQAIQEAVVHNVPPPQITARPVAPPPNQQQMPFFPRNV----RPH 86
Query: 439 TAVLYRPLARPRQS 398
T L P PR S
Sbjct: 87 TGPLPPPPMMPRVS 100
>SB_6891| Best HMM Match : Bac_chlorC (HMM E-Value=3.7)
Length = 433
Score = 28.7 bits (61), Expect = 4.0
Identities = 18/76 (23%), Positives = 31/76 (40%), Gaps = 1/76 (1%)
Frame = +2
Query: 380 LQRYCCGLAWSCQRSIQHCRQWSSQCRTVPWQLFGLAHQQRRRNWGRVHLIGFSLGAHVV 559
L+ C A R CR +C + + + ++R R+W R+ ++G
Sbjct: 65 LETESCRCALCDDRGFSACRSGGLRCASRSHAMRSMRTRRRARHWDRLPIVGVKRDKERC 124
Query: 560 GNAGRQA-GGRPNKGY 604
R A GGR +G+
Sbjct: 125 LVVPRPAIGGRTRQGH 140
>SB_15037| Best HMM Match : zf-LSD1 (HMM E-Value=6.5)
Length = 191
Score = 28.7 bits (61), Expect = 4.0
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Frame = +2
Query: 305 CPRLEQQRKLRCEHHDPPRLAGRLRLQ--RYCCGLAWSC 415
CP LR H PP GR+R+ R+C G+A C
Sbjct: 33 CPLTAIVLGLRASVHLPPLRCGRVRVSTYRHCVGVACEC 71
>SB_6592| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1228
Score = 28.7 bits (61), Expect = 4.0
Identities = 22/81 (27%), Positives = 31/81 (38%), Gaps = 1/81 (1%)
Frame = -3
Query: 589 SATSLSSSVTDNVRAQAEANQVDSTPIPPPLLMSQTKKLPRNCPTLGTPLTAVLYRPLAR 410
S + +++ + A A N T PPPLL K L L ++ YRP
Sbjct: 193 SLQGMEPTLSSDHPALALENSQSKTEEPPPLLSEGAPKDAEVSLRLSEELPSIEYRPSGT 252
Query: 409 PRQSTTITLQS-ETASKAGRI 350
P +QS T + G I
Sbjct: 253 PEGVAAPDVQSTPTVASTGNI 273
>SB_28019| Best HMM Match : KNOX2 (HMM E-Value=0.24)
Length = 318
Score = 28.3 bits (60), Expect = 5.3
Identities = 9/31 (29%), Positives = 21/31 (67%)
Frame = +1
Query: 16 LIALSSGNAIPMIPGDNSHYVEGVSRYVWMP 108
+ A+ S ++IP + + Y++ +SR++W+P
Sbjct: 223 IYAMGSFSSIPKVCRQFTDYLQAISRFLWVP 253
>SB_884| Best HMM Match : KNOX2 (HMM E-Value=0.24)
Length = 233
Score = 28.3 bits (60), Expect = 5.3
Identities = 9/31 (29%), Positives = 21/31 (67%)
Frame = +1
Query: 16 LIALSSGNAIPMIPGDNSHYVEGVSRYVWMP 108
+ A+ S ++IP + + Y++ +SR++W+P
Sbjct: 195 IYAMGSFSSIPKVCRQFTDYLQAISRFLWVP 225
>SB_39797| Best HMM Match : VWA (HMM E-Value=6e-26)
Length = 317
Score = 28.3 bits (60), Expect = 5.3
Identities = 21/55 (38%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = -2
Query: 491 EPDQKVAKELSDTGNSIDGS-VV*TVGKTTPVHNNNVAVGDGQQGGADHGVHSGV 330
EPD+K KE D G ID S + + PV N VA Q + G H GV
Sbjct: 67 EPDKKPCKEAIDVGVIIDASESINNEQENFPVVLNFVANISKQYQVSQEGTHFGV 121
>SB_40963| Best HMM Match : Collagen (HMM E-Value=2.2e-09)
Length = 234
Score = 27.9 bits (59), Expect = 7.0
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = -2
Query: 380 VGDGQQGGADHGVHSGVSVAVPAVDNNKERQVSIVVRVPDRVTLP 246
+GDG GGA HG G AV + + +KE + V + D++ LP
Sbjct: 79 LGDGGFGGASHG---GEMAAVQSEEQHKEAIIEASV-LFDKIVLP 119
>SB_24276| Best HMM Match : Extensin_2 (HMM E-Value=2.1e-05)
Length = 449
Score = 27.9 bits (59), Expect = 7.0
Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 3/58 (5%)
Frame = +2
Query: 380 LQRYCCGLAWSCQRSIQHCRQWSSQCRTVPWQLFGLAHQQR---RRNWGRVHLIGFSL 544
L R C C + +C QW + PW+ AH+Q R G H IGFS+
Sbjct: 331 LSRRCAEWGNLCNGAT-NCDQWGNTAFDGPWRT---AHRQAYFTNRATGETHTIGFSV 384
>SB_40954| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 274
Score = 27.9 bits (59), Expect = 7.0
Identities = 20/79 (25%), Positives = 33/79 (41%)
Frame = -3
Query: 598 LVGSATSLSSSVTDNVRAQAEANQVDSTPIPPPLLMSQTKKLPRNCPTLGTPLTAVLYRP 419
+V + + SSS + + E++ + PP K + P+L +P +P
Sbjct: 145 MVNAQSQASSSTSTQTNSSTESSAAKTKGEKPPAKPKDAPKSTSDWPSLTSP----AIQP 200
Query: 418 LARPRQSTTITLQSETASK 362
+A STT T S SK
Sbjct: 201 VAPATPSTTTTAPSTADSK 219
>SB_39747| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 356
Score = 27.9 bits (59), Expect = 7.0
Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = -3
Query: 487 QTKKLPRNCPTLGTPLTAVLYRPLARPRQS-TTITLQSET-ASKAGRIMV 344
Q LPRN P L + T V R +RP TT++ S T S+AG I V
Sbjct: 67 QRTSLPRNRPLLPSRETPVQKRNPSRPISGRTTVSALSRTPGSRAGGITV 116
>SB_28160| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 672
Score = 27.9 bits (59), Expect = 7.0
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = -3
Query: 577 LSSSVTDNVRAQAEANQVDSTPIPPPLLMSQTKK 476
++ + D++ +AN+VD+T PPP+ KK
Sbjct: 133 VTGTSVDHLSTLPKANRVDATRTPPPISEDDAKK 166
>SB_208| Best HMM Match : zf-C2H2 (HMM E-Value=1.7)
Length = 836
Score = 27.5 bits (58), Expect = 9.3
Identities = 26/85 (30%), Positives = 36/85 (42%), Gaps = 2/85 (2%)
Frame = +2
Query: 176 GTVQTTN-TGFSPDVTKTTIKLLQMAM*LYPELELQWKPASLCYCPRLEQQRKLRC-EHH 349
G VQ N T + D+ K L M + L E +L A L + P + + C H
Sbjct: 22 GIVQCVNITNCTKDIKKHLRSLGVMDVSLDYEAKLLLARAGL-FDPEGKYTKVTICPSHR 80
Query: 350 DPPRLAGRLRLQRYCCGLAWSCQRS 424
D + R + CC L+WS RS
Sbjct: 81 DSHGIRWRSNRKNCCCPLSWSEHRS 105
>SB_48920| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 27.5 bits (58), Expect = 9.3
Identities = 18/35 (51%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
Frame = -3
Query: 505 PPLLMSQTKKL---PRNCPTLGTPLTAVLYRPLAR 410
PPL + KL PR CPT G PL VL RP R
Sbjct: 21 PPLEVDGIDKLDAMPRKCPTPGDPL--VLERPPPR 53
>SB_32520| Best HMM Match : G_glu_transpept (HMM E-Value=4.9e-12)
Length = 1225
Score = 27.5 bits (58), Expect = 9.3
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +1
Query: 457 SDSSLATFWSGSSTTEAELGSSPLDW 534
S S +FW G S TEA LG++ W
Sbjct: 379 SKSEARSFWQGVSETEALLGTNEKIW 404
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,223,505
Number of Sequences: 59808
Number of extensions: 520894
Number of successful extensions: 3226
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 2989
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3222
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1536271375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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