Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0546
(621 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g59940.1 68414.m06752 two-component responsive regulator / re... 34 0.087
At3g26510.4 68416.m03309 octicosapeptide/Phox/Bem1p (PB1) domain... 31 0.81
At3g26510.3 68416.m03306 octicosapeptide/Phox/Bem1p (PB1) domain... 31 0.81
At3g26510.2 68416.m03307 octicosapeptide/Phox/Bem1p (PB1) domain... 31 0.81
At3g26510.1 68416.m03308 octicosapeptide/Phox/Bem1p (PB1) domain... 31 0.81
At2g37925.1 68415.m04655 copper transporter family protein simil... 31 0.81
At5g45500.1 68418.m05589 expressed protein weak similarity to re... 29 1.9
At3g20460.1 68416.m02590 sugar transporter, putative similar to ... 29 2.5
At1g55540.1 68414.m06356 proline-rich family protein contains pr... 29 2.5
At5g02030.1 68418.m00123 homeodomain protein (BELLRINGER) severa... 29 3.3
At2g28100.1 68415.m03413 glycosyl hydrolase family 29 / alpha-L-... 29 3.3
At1g66440.1 68414.m07548 DC1 domain-containing protein contains ... 29 3.3
At1g23540.1 68414.m02960 protein kinase family protein contains ... 28 4.3
At5g13950.1 68418.m01631 expressed protein 28 5.7
At2g28940.2 68415.m03518 protein kinase family protein contains ... 28 5.7
At1g08450.2 68414.m00935 calreticulin 3 (CRT3) identical to simi... 28 5.7
At1g08450.1 68414.m00934 calreticulin 3 (CRT3) identical to simi... 28 5.7
At3g55160.1 68416.m06126 expressed protein 27 7.6
At3g07900.1 68416.m00965 expressed protein contains Pfam PF03138... 27 7.6
At2g42490.1 68415.m05256 copper amine oxidase, putative similar ... 27 7.6
>At1g59940.1 68414.m06752 two-component responsive regulator /
response regulator 3 (ARR3) identical to response
regulator 3 GI:3953595 from [Arabidopsis thaliana]
Length = 231
Score = 33.9 bits (74), Expect = 0.087
Identities = 21/60 (35%), Positives = 31/60 (51%)
Frame = -3
Query: 610 KPVTLVGSATSLSSSVTDNVRAQAEANQVDSTPIPPPLLMSQTKKLPRNCPTLGTPLTAV 431
KPV L L S +T +V+ AE N+ T PPP +S T + + T+ +PL+ V
Sbjct: 146 KPVKLA-DVKRLRSYLTRDVKVAAEGNKRKLTTPPPPPPLSATSSMESSDSTVESPLSMV 204
>At3g26510.4 68416.m03309 octicosapeptide/Phox/Bem1p (PB1)
domain-containing protein contains Pfam profile
PF00564: PB1 domain
Length = 196
Score = 30.7 bits (66), Expect = 0.81
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = -3
Query: 613 PKPVTLVGSATSLSSSVTDNVRAQAEANQVDSTPIP--PPLLMSQTKKLPRNC 461
P P+ L S T+ SSS T + + + + P+P PP + + TK C
Sbjct: 125 PPPLALPSSTTTSSSSTTSSTSSSPRSPSLSKPPLPPSPPRITTVTKNPCYGC 177
>At3g26510.3 68416.m03306 octicosapeptide/Phox/Bem1p (PB1)
domain-containing protein contains Pfam profile
PF00564: PB1 domain
Length = 218
Score = 30.7 bits (66), Expect = 0.81
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = -3
Query: 613 PKPVTLVGSATSLSSSVTDNVRAQAEANQVDSTPIP--PPLLMSQTKKLPRNC 461
P P+ L S T+ SSS T + + + + P+P PP + + TK C
Sbjct: 147 PPPLALPSSTTTSSSSTTSSTSSSPRSPSLSKPPLPPSPPRITTVTKNPCYGC 199
>At3g26510.2 68416.m03307 octicosapeptide/Phox/Bem1p (PB1)
domain-containing protein contains Pfam profile
PF00564: PB1 domain
Length = 196
Score = 30.7 bits (66), Expect = 0.81
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = -3
Query: 613 PKPVTLVGSATSLSSSVTDNVRAQAEANQVDSTPIP--PPLLMSQTKKLPRNC 461
P P+ L S T+ SSS T + + + + P+P PP + + TK C
Sbjct: 125 PPPLALPSSTTTSSSSTTSSTSSSPRSPSLSKPPLPPSPPRITTVTKNPCYGC 177
>At3g26510.1 68416.m03308 octicosapeptide/Phox/Bem1p (PB1)
domain-containing protein contains Pfam profile
PF00564: PB1 domain
Length = 196
Score = 30.7 bits (66), Expect = 0.81
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = -3
Query: 613 PKPVTLVGSATSLSSSVTDNVRAQAEANQVDSTPIP--PPLLMSQTKKLPRNC 461
P P+ L S T+ SSS T + + + + P+P PP + + TK C
Sbjct: 125 PPPLALPSSTTTSSSSTTSSTSSSPRSPSLSKPPLPPSPPRITTVTKNPCYGC 177
>At2g37925.1 68415.m04655 copper transporter family protein similar
to SP|Q39065 Copper transporter 1 (COPT1) {Arabidopsis
thaliana}; contains Pfam profile PF04145: Ctr copper
transporter family; supporting cDNA
gi|18496855|gb|AF466372.1|
Length = 145
Score = 30.7 bits (66), Expect = 0.81
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 5/52 (9%)
Frame = +3
Query: 300 VIVHGWNSNGNSAVNTMIRPALLAVS-----DCNVIVVDWRGLANGLYNTAV 440
V+V WN+ + T RP+LL + +C V+ W G G+Y A+
Sbjct: 8 VVVEAWNTTTTTQTQTPHRPSLLHPTFYWGYNCQVLFSGWPGSDRGMYALAL 59
>At5g45500.1 68418.m05589 expressed protein weak similarity to
resistance complex protein I2C-2 [Lycopersicon
esculentum] GI:2258317
Length = 489
Score = 29.5 bits (63), Expect = 1.9
Identities = 14/56 (25%), Positives = 28/56 (50%)
Frame = +2
Query: 173 QGTVQTTNTGFSPDVTKTTIKLLQMAM*LYPELELQWKPASLCYCPRLEQQRKLRC 340
+G ++ T G S + K+ + + P+L+++W+ S Y P L+ K +C
Sbjct: 412 KGGIKLTGFGKSLPSQNSKCKVTVLRLKFLPKLKVEWRDLSKRYFPELKFLEKYQC 467
>At3g20460.1 68416.m02590 sugar transporter, putative similar to
ERD6 protein [Arabidopsis thaliana] GI:3123712,
sugar-porter family proteins 1 and 2 [Arabidopsis
thaliana] GI:14585699, GI:14585701; contains Pfam
profile PF00083: major facilitator superfamily protein
Length = 488
Score = 29.1 bits (62), Expect = 2.5
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
Frame = +3
Query: 333 SAVNTMIRPALLAVSDCNVIVVDWRGLANGLYNTAVNGVPSVGQFLGNFLV-----WLIN 497
SA+N+++ A +AV+ V+ W+ LA ++ VP V +F+G F + WL
Sbjct: 181 SAINSLVMCASVAVTYLLGSVISWQKLA------LISTVPCVFEFVGLFFIPESPRWLSR 234
Query: 498 NG 503
NG
Sbjct: 235 NG 236
>At1g55540.1 68414.m06356 proline-rich family protein contains
proline rich extensin domain, INTERPRO:IPR002965
Length = 915
Score = 29.1 bits (62), Expect = 2.5
Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Frame = -3
Query: 619 PDPKPVTLVGS-ATSLSSSVTDNVRAQAEANQVDSTPIPPPLLMSQTKKLPRNCPTLGTP 443
P P + V S S +SS+TD+ R + + + PI PP + + P+ P
Sbjct: 458 PPSAPTSQVSSDQASATSSLTDSSRLFSSTSLSSTPPITPPDAFQSPQV---STPSSAVP 514
Query: 442 LTAVLYRPLARPRQSTTITLQSET 371
+T + P QS++I T
Sbjct: 515 ITEPVSEPKKPEAQSSSILSTQST 538
>At5g02030.1 68418.m00123 homeodomain protein (BELLRINGER) several
homeodomain proteins;
Length = 575
Score = 28.7 bits (61), Expect = 3.3
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = -2
Query: 398 HNNNVAVGDGQQGGADHGVHSGV-SVAVPAVDNNKERQVSIVVRVPDRVTLP 246
+NNN V G GG+ G G+ S VP ++++ VS+ + + ++ LP
Sbjct: 475 NNNNSYVNSGSGGGSAVGFSYGIGSSNVPVMNSSTNGGVSLTLGLHHQIGLP 526
>At2g28100.1 68415.m03413 glycosyl hydrolase family 29 /
alpha-L-fucosidase, putative similar to
alpha-L-fucosidase SP:P10901 from [Dictyostelium
discoideum]
Length = 506
Score = 28.7 bits (61), Expect = 3.3
Identities = 18/74 (24%), Positives = 35/74 (47%)
Frame = -2
Query: 515 PNSASVVDEPDQKVAKELSDTGNSIDGSVV*TVGKTTPVHNNNVAVGDGQQGGADHGVHS 336
PNS+ ++ E D KV +E S+ NSI + + + V+++++ Q G + +
Sbjct: 319 PNSSGLISEQDIKVLEEFSEMKNSIFSN---NLARKAFVNSSSIRGDQSSQFGPKNVLEE 375
Query: 335 GVSVAVPAVDNNKE 294
G+ +N E
Sbjct: 376 GLDKYWAPEENQNE 389
>At1g66440.1 68414.m07548 DC1 domain-containing protein contains
Pfam protein PF03107 DC1 domain
Length = 726
Score = 28.7 bits (61), Expect = 3.3
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 11/55 (20%)
Frame = -3
Query: 619 PDPKPVTLVGSATSLSSSVTDNVRAQAE-----------ANQVDSTPIPPPLLMS 488
P+P ++L+ SLSSS++D+ + + E N +DS P P P LMS
Sbjct: 54 PEPGVISLISQMISLSSSISDS-KPELELISLVNHMISLVNSIDSEPEPDPDLMS 107
>At1g23540.1 68414.m02960 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 720
Score = 28.3 bits (60), Expect = 4.3
Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = -3
Query: 613 PKPVTLVGSATSLSSSVTDNVRAQAEANQ-VDSTPIPPPLLMSQTKKLPRNCPTLGTP 443
P P + + S+ +TD+ ++++ VDSTP PPP +++ P + T P
Sbjct: 58 PPPDSQLPPLPSILPPLTDSPPPPSDSSPPVDSTPSPPPPTSNESPSPPEDSETPPAP 115
>At5g13950.1 68418.m01631 expressed protein
Length = 939
Score = 27.9 bits (59), Expect = 5.7
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 7/62 (11%)
Frame = +1
Query: 106 PDGEGVPH--LVDLEETAEEDI----LMSRNGANNQYWLFTRRNQNN-HQVITNGNVTLS 264
P+G+ V +DLE E++ ++ RN ANN + F NQN Q + NG +S
Sbjct: 624 PEGDEVAKNCFIDLESNMPEEVDRRKMLQRN-ANNSFGSFPNNNQNEILQSLFNGQGMVS 682
Query: 265 GT 270
T
Sbjct: 683 RT 684
>At2g28940.2 68415.m03518 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 462
Score = 27.9 bits (59), Expect = 5.7
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = +3
Query: 501 GGGIGVEST*LASAWARTLSVTLDDRLVADPTRVTGFGS 617
GGG V S +WAR+LSV +DPTR + F S
Sbjct: 22 GGGDSVVSRASRLSWARSLSVA--SSTTSDPTRRSEFDS 58
>At1g08450.2 68414.m00935 calreticulin 3 (CRT3) identical to similar
to SP|O04153 Calreticulin 3 precursor {Arabidopsis
thaliana}
Length = 370
Score = 27.9 bits (59), Expect = 5.7
Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 2/24 (8%)
Frame = +3
Query: 219 PKQPSSYYK--WQCNSIRNSNYNG 284
PK P+S YK W+ I+N NY G
Sbjct: 220 PKIPNSAYKGPWKAKRIKNPNYKG 243
>At1g08450.1 68414.m00934 calreticulin 3 (CRT3) identical to similar
to SP|O04153 Calreticulin 3 precursor {Arabidopsis
thaliana}
Length = 424
Score = 27.9 bits (59), Expect = 5.7
Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 2/24 (8%)
Frame = +3
Query: 219 PKQPSSYYK--WQCNSIRNSNYNG 284
PK P+S YK W+ I+N NY G
Sbjct: 274 PKIPNSAYKGPWKAKRIKNPNYKG 297
>At3g55160.1 68416.m06126 expressed protein
Length = 2149
Score = 27.5 bits (58), Expect = 7.6
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = +3
Query: 12 WLNSIVFWQCYPHDPWRQQ 68
WL+S ++ CYP P+R++
Sbjct: 762 WLSSFLYLSCYPSAPYRRK 780
>At3g07900.1 68416.m00965 expressed protein contains Pfam PF03138:
Plant protein family. The function of this family of
plant proteins is unknown; previously annotated as
'auxin-independent growth promoter -related' based on
similarity to axi 1 protein (GB:X80301) (GI:559920) from
[Nicotiana tabacum], which, due to scienitific fraud was
retracted. Retraction in: Schell J. EMBO J 1999 May
17;18(10):2908. PMID:10400497.
Length = 579
Score = 27.5 bits (58), Expect = 7.6
Identities = 18/65 (27%), Positives = 27/65 (41%)
Frame = -3
Query: 496 LMSQTKKLPRNCPTLGTPLTAVLYRPLARPRQSTTITLQSETASKAGRIMVFTAEFPLLF 317
+ S +KL CP +T +L R L PR + E + T+EFP L+
Sbjct: 397 MTSNERKLAGLCPLNAKEVTRLL-RALGAPRDARIYWAGGEPLGGKEALKPLTSEFPHLY 455
Query: 316 QPWTI 302
+ I
Sbjct: 456 NKYDI 460
>At2g42490.1 68415.m05256 copper amine oxidase, putative similar to
copper methylamine oxidase precursor (MAOXII)
[Arthrobacter sp.] SWISS-PROT:Q07123
Length = 776
Score = 27.5 bits (58), Expect = 7.6
Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Frame = +2
Query: 464 VPWQLFGLAHQQRRRNWG--RVHLIGFSLGAHVVGNAGRQAGGRPN 595
V W +FG+ H R +W V IGF+L H N PN
Sbjct: 703 VLWYVFGITHVPRLEDWPVMPVEHIGFTLMPHGFFNCSPAVDVPPN 748
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,499,642
Number of Sequences: 28952
Number of extensions: 357074
Number of successful extensions: 1332
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1274
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1329
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1255974912
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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