SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0545
         (693 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    25   0.59 
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     25   0.78 
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    25   0.78 
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   2.4  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   2.4  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    23   3.1  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    22   4.1  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    22   4.1  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    22   4.1  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    22   4.1  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   5.5  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   7.2  

>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 25.0 bits (52), Expect = 0.59
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -1

Query: 444 LGYYDTLLDNSTLLDVW 394
           L YY T  D +T+LD W
Sbjct: 310 LAYYSTTCDIATILDFW 326


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 24.6 bits (51), Expect = 0.78
 Identities = 22/80 (27%), Positives = 31/80 (38%)
 Frame = +1

Query: 133 IPTHLESMVPTVRWYCYHQLPLPFNCYLFPRRILRSCIPSHIAGSSRRSEPGEISYVHFA 312
           +  HL S   T+ W+ +HQ   P   Y+     +  C P H   + R       S  HF 
Sbjct: 122 VVNHLSSDSTTIHWHGHHQKNSP---YMDGVPFVTQC-PIHPGMTFRYHFNVHNSGTHFW 177

Query: 313 VNHPEFSEENYDKDVSIVRV 372
            +H  F   +      IVRV
Sbjct: 178 HSHSGFQRSDGTFGPFIVRV 197


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 24.6 bits (51), Expect = 0.78
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +3

Query: 600 CAGFVRAGGRDYDNTDLGALPSSKM 674
           CA  +  GGR+  N +   LP  K+
Sbjct: 7   CALILTVGGRNLKNAEFNGLPEEKL 31


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = +1

Query: 247 PSHIAGSSRRSEPGEISYVHFAV 315
           P   A + R  EP  I Y HF +
Sbjct: 105 PDECARACREGEPPRICYYHFTL 127


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = +1

Query: 247 PSHIAGSSRRSEPGEISYVHFAV 315
           P   A + R  EP  I Y HF +
Sbjct: 105 PDECARACREGEPPRICYYHFTL 127


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 11/45 (24%), Positives = 19/45 (42%)
 Frame = +2

Query: 140 PILNQWFQQCAGIVITNYHYLSTATCFQGEFYDPAYRRISLDLPV 274
           P + QW Q   G   +   ++     FQ E     Y++   ++PV
Sbjct: 376 PSIVQWMQDQKGWGRSEGDFIKLWDMFQNESLTRLYKKAGKEIPV 420


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 12/29 (41%), Positives = 13/29 (44%)
 Frame = -1

Query: 108 CSPIDTGLPRSLAVQLQTAASTATAKVRT 22
           C P    L R L   LQT  +  T K RT
Sbjct: 53  CPPQGVDLKRVLPEALQTNCAKCTEKQRT 81


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 7/25 (28%), Positives = 12/25 (48%)
 Frame = +2

Query: 185 TNYHYLSTATCFQGEFYDPAYRRIS 259
           T  HY      + GE Y+P +  ++
Sbjct: 301 TQQHYQMNQNMYPGEMYNPEHTTVN 325


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 7/25 (28%), Positives = 12/25 (48%)
 Frame = +2

Query: 185 TNYHYLSTATCFQGEFYDPAYRRIS 259
           T  HY      + GE Y+P +  ++
Sbjct: 249 TQQHYQMNQNMYPGEMYNPEHTTVN 273


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 7/25 (28%), Positives = 12/25 (48%)
 Frame = +2

Query: 185 TNYHYLSTATCFQGEFYDPAYRRIS 259
           T  HY      + GE Y+P +  ++
Sbjct: 432 TQQHYQMNQNMYPGEMYNPEHTTVN 456


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +2

Query: 110 PSLVQIEVFLPILNQW 157
           P +  IE ++P+L QW
Sbjct: 496 PLITLIETWMPLLPQW 511


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/28 (25%), Positives = 13/28 (46%)
 Frame = -1

Query: 189 LVITIPAHCWNH*FKMGRNTSIWTRLGC 106
           + +T   +CW+   K+    S+W    C
Sbjct: 542 IFVTYQLYCWSSFLKISVLQSLWASPTC 569


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,925
Number of Sequences: 336
Number of extensions: 4211
Number of successful extensions: 17
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -