Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0545
(693 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
S76959-1|AAB33934.1| 85|Apis mellifera olfactory receptor prot... 24 1.6
AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-act... 23 2.8
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 23 2.8
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 23 2.8
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 23 3.6
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 22 6.4
AF205594-1|AAQ13840.1| 156|Apis mellifera acid phosphatase prec... 22 6.4
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 21 8.4
EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 21 8.4
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 21 8.4
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 21 8.4
>S76959-1|AAB33934.1| 85|Apis mellifera olfactory receptor
protein.
Length = 85
Score = 23.8 bits (49), Expect = 1.6
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -1
Query: 396 WAEVDGMCYSYDAHILVVILLREFGMV-NSKVNIRYFTG 283
W + G C S HI++V L EFG++ + K++ ++ G
Sbjct: 46 WFKAIGTCGS---HIIIVGLFYEFGLITHVKLSSDWYMG 81
>AY739659-1|AAU85298.1| 288|Apis mellifera
hyperpolarization-activated ion channelvariant T
protein.
Length = 288
Score = 23.0 bits (47), Expect = 2.8
Identities = 8/25 (32%), Positives = 13/25 (52%)
Frame = -2
Query: 422 WIIAPCWMFGPKWMACVTRTMLTSL 348
W+I PC F W C+ ++ +L
Sbjct: 79 WVIHPCSSFRFYWDLCMLLLLVANL 103
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 23.0 bits (47), Expect = 2.8
Identities = 8/25 (32%), Positives = 13/25 (52%)
Frame = -2
Query: 422 WIIAPCWMFGPKWMACVTRTMLTSL 348
W+I PC F W C+ ++ +L
Sbjct: 79 WVIHPCSSFRFYWDLCMLLLLVANL 103
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 23.0 bits (47), Expect = 2.8
Identities = 8/25 (32%), Positives = 13/25 (52%)
Frame = -2
Query: 422 WIIAPCWMFGPKWMACVTRTMLTSL 348
W+I PC F W C+ ++ +L
Sbjct: 79 WVIHPCSSFRFYWDLCMLLLLVANL 103
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 22.6 bits (46), Expect = 3.6
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = +3
Query: 369 SNTCHPLRPKHPAGCYYPTRCRNTPGYF 452
S++C + Y T CR PGYF
Sbjct: 276 SHSCEACPAHSKSSDYGFTECRCDPGYF 303
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 21.8 bits (44), Expect = 6.4
Identities = 14/72 (19%), Positives = 28/72 (38%)
Frame = -2
Query: 566 VVLFPAVFFVGHNEFELVEVPSDTLPP*TVVPHPSRSTKIPWGITTPCWIIAPCWMFGPK 387
+V+F V F+ H + + V + + P + +PS ++P C + G
Sbjct: 384 IVIFSVVGFMAHEQQKPVADVAASGPGLAFLVYPSAVLELPGSSIWSCLFFFMLILIGLD 443
Query: 386 WMACVTRTMLTS 351
C +T+
Sbjct: 444 SQFCTVEGFITA 455
>AF205594-1|AAQ13840.1| 156|Apis mellifera acid phosphatase
precursor protein.
Length = 156
Score = 21.8 bits (44), Expect = 6.4
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +1
Query: 589 ITNSAPVLSGLVAATTTIL 645
ITNS P+L L +TI+
Sbjct: 117 ITNSTPLLKKLYGGNSTII 135
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 21.4 bits (43), Expect = 8.4
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +2
Query: 191 YHYLSTATCFQGEFYD-PAYRRISLDLPVAVSPVKYLMFTLLLTIPN 328
+ +LS+ + Y+ P Y +++LD V P+ M+ TIPN
Sbjct: 621 FFFLSSMDESNTKSYEIPLYGKMTLDDKVFGFPLDRPMWAWNFTIPN 667
>EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein.
Length = 686
Score = 21.4 bits (43), Expect = 8.4
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +2
Query: 191 YHYLSTATCFQGEFYD-PAYRRISLDLPVAVSPVKYLMFTLLLTIPN 328
+ +LS+ + Y+ P Y +++LD V P+ M+ TIPN
Sbjct: 621 FFFLSSMDESNTKSYEIPLYGKMTLDDKVFGFPLDRPMWAWNFTIPN 667
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 21.4 bits (43), Expect = 8.4
Identities = 14/72 (19%), Positives = 28/72 (38%)
Frame = -2
Query: 566 VVLFPAVFFVGHNEFELVEVPSDTLPP*TVVPHPSRSTKIPWGITTPCWIIAPCWMFGPK 387
+V+F V F+ H + + V + + P + +PS ++P C + G
Sbjct: 331 IVIFSVVGFMAHEQQKPVADVAVSGPGLAFLVYPSAVLELPGSSIWSCLFFFMLILIGLD 390
Query: 386 WMACVTRTMLTS 351
C +T+
Sbjct: 391 SQFCTVEGFITA 402
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 21.4 bits (43), Expect = 8.4
Identities = 7/27 (25%), Positives = 15/27 (55%)
Frame = +3
Query: 177 LLSPTTTTFQLLPVSKENSTILHTVAY 257
+L+P + + P+S E ++H + Y
Sbjct: 318 ILTPVSPYGYVKPISPEQEELIHRLVY 344
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 211,693
Number of Sequences: 438
Number of extensions: 5221
Number of successful extensions: 16
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21195810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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