Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0543
(390 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 146 7e-36
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 141 2e-34
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 141 2e-34
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 140 5e-34
SB_56| Best HMM Match : Actin (HMM E-Value=0) 140 5e-34
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 138 1e-33
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 61 3e-10
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 8e-10
SB_54| Best HMM Match : Actin (HMM E-Value=0) 60 8e-10
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 8e-09
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 3e-05
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 36 0.012
SB_35006| Best HMM Match : PT (HMM E-Value=3.4) 36 0.016
SB_51929| Best HMM Match : ARID (HMM E-Value=1.2) 32 0.14
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.25
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.25
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.58
SB_33399| Best HMM Match : Ank (HMM E-Value=0) 30 0.58
SB_58222| Best HMM Match : HS1_rep (HMM E-Value=0) 29 1.4
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 29 1.8
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.4
SB_13062| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.4
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.4
SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23) 28 2.4
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 28 3.1
SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.1
SB_7573| Best HMM Match : Nucleoporin (HMM E-Value=0.21) 27 4.1
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 27 5.4
SB_45181| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
SB_44193| Best HMM Match : 7tm_1 (HMM E-Value=4.4e-12) 27 7.2
SB_12742| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
SB_222| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
SB_34833| Best HMM Match : E6 (HMM E-Value=7.2) 26 9.5
SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.5
SB_26308| Best HMM Match : Drf_FH1 (HMM E-Value=1.6) 26 9.5
SB_15990| Best HMM Match : zf-CCCH (HMM E-Value=4.1) 26 9.5
SB_14615| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.5
SB_35722| Best HMM Match : CutA1 (HMM E-Value=8.3) 26 9.5
SB_30681| Best HMM Match : An_peroxidase (HMM E-Value=4.3e-29) 26 9.5
SB_22519| Best HMM Match : Pterin_4a (HMM E-Value=0.86) 26 9.5
SB_21813| Best HMM Match : CutA1 (HMM E-Value=8.3) 26 9.5
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 146 bits (353), Expect = 7e-36
Identities = 67/71 (94%), Positives = 69/71 (97%)
Frame = +3
Query: 51 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 230
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 231 SKRGILTLNTP 263
SKRGILTL P
Sbjct: 61 SKRGILTLKYP 71
Score = 85.0 bits (201), Expect = 2e-17
Identities = 35/44 (79%), Positives = 38/44 (86%)
Frame = +2
Query: 254 QYPIVHGIVTNWDDMVKIWHHNFYNELRVVPDEDPVLLTDAALN 385
+YPI HGIVTNWDDM KIWHH FYNELRV P+E PVLLT+A LN
Sbjct: 69 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 112
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 141 bits (342), Expect = 2e-34
Identities = 66/71 (92%), Positives = 68/71 (95%)
Frame = +3
Query: 51 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 230
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 231 SKRGILTLNTP 263
SKRGILTL P
Sbjct: 61 SKRGILTLKYP 71
Score = 85.0 bits (201), Expect = 2e-17
Identities = 35/44 (79%), Positives = 38/44 (86%)
Frame = +2
Query: 254 QYPIVHGIVTNWDDMVKIWHHNFYNELRVVPDEDPVLLTDAALN 385
+YPI HGIVTNWDDM KIWHH FYNELRV P+E PVLLT+A LN
Sbjct: 69 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 112
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 141 bits (342), Expect = 2e-34
Identities = 64/71 (90%), Positives = 68/71 (95%)
Frame = +3
Query: 51 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 230
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 231 SKRGILTLNTP 263
SKRGILTL P
Sbjct: 61 SKRGILTLKYP 71
Score = 85.0 bits (201), Expect = 2e-17
Identities = 35/44 (79%), Positives = 38/44 (86%)
Frame = +2
Query: 254 QYPIVHGIVTNWDDMVKIWHHNFYNELRVVPDEDPVLLTDAALN 385
+YPI HGIVTNWDDM KIWHH FYNELRV P+E PVLLT+A LN
Sbjct: 69 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 112
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 140 bits (338), Expect = 5e-34
Identities = 64/69 (92%), Positives = 67/69 (97%)
Frame = +3
Query: 57 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 236
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 237 RGILTLNTP 263
RGILTL P
Sbjct: 62 RGILTLKYP 70
Score = 39.9 bits (89), Expect = 7e-04
Identities = 16/23 (69%), Positives = 17/23 (73%)
Frame = +2
Query: 254 QYPIVHGIVTNWDDMVKIWHHNF 322
+YPI HGIVTNWDDM KI F
Sbjct: 68 KYPIEHGIVTNWDDMEKIMFETF 90
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 140 bits (338), Expect = 5e-34
Identities = 65/69 (94%), Positives = 67/69 (97%)
Frame = +3
Query: 57 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 236
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 237 RGILTLNTP 263
RGILTL P
Sbjct: 62 RGILTLKYP 70
Score = 85.0 bits (201), Expect = 2e-17
Identities = 35/44 (79%), Positives = 38/44 (86%)
Frame = +2
Query: 254 QYPIVHGIVTNWDDMVKIWHHNFYNELRVVPDEDPVLLTDAALN 385
+YPI HGIVTNWDDM KIWHH FYNELRV P+E PVLLT+A LN
Sbjct: 68 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 111
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 138 bits (335), Expect = 1e-33
Identities = 64/69 (92%), Positives = 67/69 (97%)
Frame = +3
Query: 57 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 236
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 237 RGILTLNTP 263
RGILTL P
Sbjct: 62 RGILTLKYP 70
Score = 85.0 bits (201), Expect = 2e-17
Identities = 35/44 (79%), Positives = 38/44 (86%)
Frame = +2
Query: 254 QYPIVHGIVTNWDDMVKIWHHNFYNELRVVPDEDPVLLTDAALN 385
+YPI HGIVTNWDDM KIWHH FYNELRV P+E PVLLT+A LN
Sbjct: 68 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 111
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 61.3 bits (142), Expect = 3e-10
Identities = 35/89 (39%), Positives = 53/89 (59%), Gaps = 3/89 (3%)
Frame = +3
Query: 39 Y*FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG--MGQKD-S 209
Y FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G + KD
Sbjct: 691 YSFKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIGDNVNVKDYK 750
Query: 210 YVGDEAQSKRGILTLNTPSYTESSLTGMT 296
GD A +K G++ LN S + + +GMT
Sbjct: 751 KYGDAAVAKSGVMHLNQLSLSLYA-SGMT 778
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 8e-10
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +3
Query: 60 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 176
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 59.7 bits (138), Expect = 8e-10
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +3
Query: 75 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 176
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
Score = 31.9 bits (69), Expect = 0.19
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +2
Query: 302 KIWHHNFYNELRVVPDEDPVLLTDAALN 385
K+W H F ++LRV ++ PVLLT+A LN
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLN 2156
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 56.4 bits (130), Expect = 8e-09
Identities = 29/67 (43%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Frame = +3
Query: 69 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRG 242
+ +V DNG+G K G+AG + P +FPS+VGRP R + + KD VGDEA R
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEASQLRY 66
Query: 243 ILTLNTP 263
+L +N P
Sbjct: 67 MLEVNYP 73
Score = 44.8 bits (101), Expect = 3e-05
Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Frame = +2
Query: 233 QKRYP-DPQYPIVHGIVTNWDDMVKIWHHNF-YNELRVVPDEDPVLLTDAALN 385
Q RY + YP+ +GIV NWDDM +W + F +++ + P VLLT+ LN
Sbjct: 63 QLRYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLN 115
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 44.4 bits (100), Expect = 3e-05
Identities = 22/39 (56%), Positives = 28/39 (71%)
Frame = -2
Query: 173 MAGPSDDRGEYGARSIISCETGLAHTGAIVYYQRGNFLV 57
MA +DD GE G+ SI+S ETGLAHTGAI+ Q + +V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 35.9 bits (79), Expect = 0.012
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +2
Query: 254 QYPIVHGIVTNWDDMVKIWHHNFYNELRVVPDEDPVLLTDAAL 382
++PI H IV +WD M + W + LR P++ LL AL
Sbjct: 299 KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLLAVLAL 341
>SB_35006| Best HMM Match : PT (HMM E-Value=3.4)
Length = 325
Score = 35.5 bits (78), Expect = 0.016
Identities = 17/38 (44%), Positives = 25/38 (65%)
Frame = -3
Query: 268 YDGVLRVRIPLLLCASSPTYESFCPMPTITP*WRGLPT 155
YDGV+ +++ LLL +SSP + S P+ TP +GL T
Sbjct: 273 YDGVIDIKLNLLLLSSSPMFLSAVPIAPHTPTLQGLHT 310
>SB_51929| Best HMM Match : ARID (HMM E-Value=1.2)
Length = 391
Score = 32.3 bits (70), Expect = 0.14
Identities = 21/70 (30%), Positives = 32/70 (45%)
Frame = +2
Query: 149 LDRRKAPPSGCDGRHGTERLVRRRRGTEQKRYPDPQYPIVHGIVTNWDDMVKIWHHNFYN 328
L+RRKA + + R R+G ++ + I+ G+ NW+D+ HH Y
Sbjct: 167 LERRKAETERAQADYDSYIQERMRQGAMKQMSYGERQAIIDGLKKNWEDL----HHQ-YQ 221
Query: 329 ELRVVPDEDP 358
L VV D P
Sbjct: 222 GLSVVTDTAP 231
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.25
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -3
Query: 148 GNTARGASSPAKPALHIPEPLSTT 77
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.25
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -3
Query: 148 GNTARGASSPAKPALHIPEPLSTT 77
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 0.58
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -3
Query: 148 GNTARGASSPAKPALHIPEPLSTT 77
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_33399| Best HMM Match : Ank (HMM E-Value=0)
Length = 1416
Score = 30.3 bits (65), Expect = 0.58
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = -3
Query: 262 GVLRVRIPLLLCASSPTYESFCPMPTITP*WRGLPTI 152
G L +P A+SP Y S P+PT TP PTI
Sbjct: 1210 GALFTPLPHETSATSPPYTSASPVPTTTPSASSSPTI 1246
>SB_58222| Best HMM Match : HS1_rep (HMM E-Value=0)
Length = 727
Score = 29.1 bits (62), Expect = 1.4
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -3
Query: 253 RVRIPLLLCASSPTYESFCPMPTITP 176
RVR L L S+P Y S CP +TP
Sbjct: 601 RVRARLSLHVSAPDYHSTCPRSIVTP 626
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 28.7 bits (61), Expect = 1.8
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +2
Query: 260 PIVHGIVTNWDDMVKIWHHNFYNELRVVPDEDPVLLTDAALNT 388
PI G++ +WD KI + + ++ P+L+++AA NT
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNT 45
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 2.4
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 148 GNTARGASSPAKPALHIPEPLSTT 77
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_13062| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 28.3 bits (60), Expect = 2.4
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +2
Query: 239 RYPDPQYPIVHGIVTNWDDMVKIWHHNFYNELRVVPDEDPVLL 367
R DP P+V + T +D ++ WH E + D+D VL+
Sbjct: 99 RTEDPNRPMVDWLATFYDVILSTWHTECITE--YIKDDDNVLV 139
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 2.4
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -3
Query: 148 GNTARGASSPAKPALHIPEPLSTT 77
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23)
Length = 2386
Score = 28.3 bits (60), Expect = 2.4
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = -2
Query: 266 RWGIEGQDTSFALC--LVSYVRVFLSHADHHTLMAGPSDDRGEYGARSIISCE 114
RWG DT +V VR + + TL +GP DDRGE + ++ E
Sbjct: 1917 RWGYPNIDTLLEQLSDIVQVVRAWPQYVRGGTL-SGPLDDRGEAAKKMVLLTE 1968
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 27.9 bits (59), Expect = 3.1
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +3
Query: 63 EVAALVVDNGSGMCKAGFAGDDAPRAV 143
++A LV+D G+ K GFA + APR++
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI 258
>SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 27.5 bits (58), Expect = 4.1
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -3
Query: 163 LPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSH 53
L IE + A++P P + +P+ + +AAT +SH
Sbjct: 222 LRRIERSNIPQATAPGTPGVPVPQAVHGVSAATQASH 258
>SB_7573| Best HMM Match : Nucleoporin (HMM E-Value=0.21)
Length = 928
Score = 27.5 bits (58), Expect = 4.1
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Frame = -3
Query: 259 VLRVRIPLLLCASS-PTYESFC----PMPTITP*WRGLPTIEGNTARGASSPAKPALHIP 95
V VR+P+L+C SS T+ C IT + L I ++A+ S P++P P
Sbjct: 375 VFPVRLPMLVCVSSVVTHVGVCFQHQCYKCITDCLQRLLAIRQSSAQSPSLPSRPG---P 431
Query: 94 EPLSTTNAAT 65
P NA T
Sbjct: 432 PPTPDPNALT 441
>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
Length = 766
Score = 27.1 bits (57), Expect = 5.4
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +3
Query: 69 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH 173
+ +++D GS KAGFA ++A + + S++G H
Sbjct: 483 SVIIIDLGSSSVKAGFAQEEA-QVFYISLIGILEH 516
>SB_45181| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 747
Score = 26.6 bits (56), Expect = 7.2
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +2
Query: 182 DGRHGTERLVRRRRGTE 232
+GR GTER RR RG E
Sbjct: 471 EGRRGTERSYRRHRGKE 487
>SB_44193| Best HMM Match : 7tm_1 (HMM E-Value=4.4e-12)
Length = 863
Score = 26.6 bits (56), Expect = 7.2
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +2
Query: 143 IPLDRRKAPPSGCDGRHGTERLVRRRRGTEQKRY 244
+P+DR AP G D + TE++V +++ +Y
Sbjct: 67 VPVDRVTAPLRGTDMKKETEKVVLKKKEESLHKY 100
>SB_12742| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1077
Score = 26.6 bits (56), Expect = 7.2
Identities = 10/27 (37%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = +3
Query: 48 KMCDEEVAALVVDNG-SGMCKAGFAGD 125
++CD++ + +N MCKAG+ GD
Sbjct: 487 RLCDKDAVCRLENNAIKCMCKAGYTGD 513
>SB_222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2323
Score = 26.6 bits (56), Expect = 7.2
Identities = 17/44 (38%), Positives = 19/44 (43%)
Frame = -3
Query: 241 PLLLCASSPTYESFCPMPTITP*WRGLPTIEGNTARGASSPAKP 110
P C S P F +P P W LP+ E N G SS A P
Sbjct: 2225 PRAECESDPVDSLFSEVP---PEWSTLPSPEQNAFGGDSSWASP 2265
>SB_34833| Best HMM Match : E6 (HMM E-Value=7.2)
Length = 135
Score = 26.2 bits (55), Expect = 9.5
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -1
Query: 123 LLRNRPCTYRSHCLLP 76
L R R C YRSH LLP
Sbjct: 52 LFRGRYCQYRSHNLLP 67
>SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6863
Score = 26.2 bits (55), Expect = 9.5
Identities = 22/94 (23%), Positives = 38/94 (40%)
Frame = -3
Query: 349 VGDNTELIVEVMMPNLHHVIPVSDDSVYDGVLRVRIPLLLCASSPTYESFCPMPTITP*W 170
+G+N+ V+ + P + D D R R P S+ T P PT P W
Sbjct: 110 LGENSPKKVKPIAPVIQSAKHTGKDGSPDKTFRDRTPSPPKPSARTSAPSSPSPTKHPTW 169
Query: 169 RGLPTIEGNTARGASSPAKPALHIPEPLSTTNAA 68
P E ++ ++S + A +P T+++
Sbjct: 170 EASP--EKSSKAPSTSKKQSAAEKAKPSRVTSSS 201
>SB_26308| Best HMM Match : Drf_FH1 (HMM E-Value=1.6)
Length = 184
Score = 26.2 bits (55), Expect = 9.5
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 4/42 (9%)
Frame = -3
Query: 169 RGLPTIE----GNTARGASSPAKPALHIPEPLSTTNAATSSS 56
RG P I NT+RG PA P + PL+ +S+S
Sbjct: 119 RGTPPIREDGYANTSRGDRGPASPHSFLSSPLNLRKQPSSAS 160
>SB_15990| Best HMM Match : zf-CCCH (HMM E-Value=4.1)
Length = 236
Score = 26.2 bits (55), Expect = 9.5
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -2
Query: 245 DTSFALCLVSYVRVFLSHADHHTL 174
+TS A C +V ++SHA HTL
Sbjct: 52 NTSHATCHTLHVTRYMSHATRHTL 75
Score = 26.2 bits (55), Expect = 9.5
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -2
Query: 245 DTSFALCLVSYVRVFLSHADHHTL 174
+TS A C +V ++SHA HTL
Sbjct: 136 NTSHATCHTLHVTRYMSHATRHTL 159
>SB_14615| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 185
Score = 26.2 bits (55), Expect = 9.5
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = -3
Query: 151 EGNTARGASSP-AKPALHIPEPLSTTNAATSS 59
+G T R SS A+P L++P P S T ++ SS
Sbjct: 79 DGGTNRTRSSASAEPTLNLPSPPSKTPSSASS 110
>SB_35722| Best HMM Match : CutA1 (HMM E-Value=8.3)
Length = 171
Score = 26.2 bits (55), Expect = 9.5
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = -3
Query: 151 EGNTARGASSP-AKPALHIPEPLSTTNAATSS 59
+G T R SS A+P L++P P S T ++ SS
Sbjct: 79 DGGTNRTRSSASAEPTLNLPSPPSKTPSSASS 110
>SB_30681| Best HMM Match : An_peroxidase (HMM E-Value=4.3e-29)
Length = 576
Score = 26.2 bits (55), Expect = 9.5
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -2
Query: 362 GRDLRRGQHGAHCRSYDAKSSPC 294
G+ L QHG CRS +S PC
Sbjct: 392 GKCLLPPQHGGFCRSPHVQSMPC 414
>SB_22519| Best HMM Match : Pterin_4a (HMM E-Value=0.86)
Length = 1578
Score = 26.2 bits (55), Expect = 9.5
Identities = 16/52 (30%), Positives = 22/52 (42%)
Frame = +3
Query: 132 PRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLNTPSYTESSLT 287
P V GR R +MV ++ Y G+ G TL YT+S+ T
Sbjct: 683 PNVVAQDRAGRYRLTEIMVATNSEEPYNGNPITFDTGYCTLTGWDYTKSNDT 734
>SB_21813| Best HMM Match : CutA1 (HMM E-Value=8.3)
Length = 200
Score = 26.2 bits (55), Expect = 9.5
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = -3
Query: 151 EGNTARGASSP-AKPALHIPEPLSTTNAATSS 59
+G T R SS A+P L++P P S T ++ SS
Sbjct: 79 DGGTNRTRSSASAEPTLNLPSPPSKTPSSASS 110
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,498,295
Number of Sequences: 59808
Number of extensions: 328078
Number of successful extensions: 1064
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 957
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1061
length of database: 16,821,457
effective HSP length: 74
effective length of database: 12,395,665
effective search space used: 681761575
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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