Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0543
(390 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 147 3e-36
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 147 3e-36
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 147 3e-36
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 147 3e-36
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 147 3e-36
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 147 3e-36
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 147 3e-36
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 147 3e-36
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 146 6e-36
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 146 6e-36
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 146 6e-36
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 144 2e-35
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 140 2e-34
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 108 1e-24
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 85 2e-17
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 67 4e-12
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 54 3e-08
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 46 9e-06
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 33 0.054
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 33 0.071
U10401-4|AAN65289.1| 937|Caenorhabditis elegans Myc and mondo-l... 30 0.50
U10401-3|AAA19059.2| 1009|Caenorhabditis elegans Myc and mondo-l... 30 0.50
AF264757-1|AAK20949.1| 1009|Caenorhabditis elegans Mlx interacto... 30 0.50
AF213473-1|AAL50027.1| 913|Caenorhabditis elegans basic helix-l... 30 0.50
U42848-3|AAA83609.1| 693|Caenorhabditis elegans Hypothetical pr... 30 0.67
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 29 0.88
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 29 0.88
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 29 1.2
U88165-4|AAR30207.1| 700|Caenorhabditis elegans Maternal effect... 28 2.7
U88165-3|AAK21393.1| 754|Caenorhabditis elegans Maternal effect... 28 2.7
U34812-1|AAB01719.1| 754|Caenorhabditis elegans MES-3 protein. 28 2.7
U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone methyl... 27 3.6
U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone methyl... 27 3.6
AF288812-1|AAG10199.1| 566|Caenorhabditis elegans synembryn pro... 27 3.6
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 27 3.6
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 27 3.6
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 27 3.6
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 27 3.6
AC084158-34|AAK68564.1| 566|Caenorhabditis elegans Resistance t... 27 3.6
AC024776-1|AAK68468.1| 338|Caenorhabditis elegans Hypothetical ... 27 6.2
AF067608-11|AAC17656.2| 368|Caenorhabditis elegans Hypothetical... 26 8.2
AF040653-12|AAB95023.2| 257|Caenorhabditis elegans Hypothetical... 26 8.2
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 147 bits (356), Expect = 3e-36
Identities = 68/71 (95%), Positives = 69/71 (97%)
Frame = +3
Query: 51 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 230
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 231 SKRGILTLNTP 263
SKRGILTL P
Sbjct: 61 SKRGILTLKYP 71
Score = 85.0 bits (201), Expect = 2e-17
Identities = 35/44 (79%), Positives = 38/44 (86%)
Frame = +2
Query: 254 QYPIVHGIVTNWDDMVKIWHHNFYNELRVVPDEDPVLLTDAALN 385
+YPI HGIVTNWDDM KIWHH FYNELRV P+E PVLLT+A LN
Sbjct: 69 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 112
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 147 bits (356), Expect = 3e-36
Identities = 68/71 (95%), Positives = 69/71 (97%)
Frame = +3
Query: 51 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 230
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 231 SKRGILTLNTP 263
SKRGILTL P
Sbjct: 61 SKRGILTLKYP 71
Score = 85.0 bits (201), Expect = 2e-17
Identities = 35/44 (79%), Positives = 38/44 (86%)
Frame = +2
Query: 254 QYPIVHGIVTNWDDMVKIWHHNFYNELRVVPDEDPVLLTDAALN 385
+YPI HGIVTNWDDM KIWHH FYNELRV P+E PVLLT+A LN
Sbjct: 69 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 112
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 147 bits (356), Expect = 3e-36
Identities = 68/71 (95%), Positives = 69/71 (97%)
Frame = +3
Query: 51 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 230
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 231 SKRGILTLNTP 263
SKRGILTL P
Sbjct: 61 SKRGILTLKYP 71
Score = 85.0 bits (201), Expect = 2e-17
Identities = 35/44 (79%), Positives = 38/44 (86%)
Frame = +2
Query: 254 QYPIVHGIVTNWDDMVKIWHHNFYNELRVVPDEDPVLLTDAALN 385
+YPI HGIVTNWDDM KIWHH FYNELRV P+E PVLLT+A LN
Sbjct: 69 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 112
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 147 bits (356), Expect = 3e-36
Identities = 68/71 (95%), Positives = 69/71 (97%)
Frame = +3
Query: 51 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 230
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 231 SKRGILTLNTP 263
SKRGILTL P
Sbjct: 61 SKRGILTLKYP 71
Score = 85.0 bits (201), Expect = 2e-17
Identities = 35/44 (79%), Positives = 38/44 (86%)
Frame = +2
Query: 254 QYPIVHGIVTNWDDMVKIWHHNFYNELRVVPDEDPVLLTDAALN 385
+YPI HGIVTNWDDM KIWHH FYNELRV P+E PVLLT+A LN
Sbjct: 69 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 112
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 147 bits (356), Expect = 3e-36
Identities = 68/71 (95%), Positives = 69/71 (97%)
Frame = +3
Query: 51 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 230
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 231 SKRGILTLNTP 263
SKRGILTL P
Sbjct: 61 SKRGILTLKYP 71
Score = 85.0 bits (201), Expect = 2e-17
Identities = 35/44 (79%), Positives = 38/44 (86%)
Frame = +2
Query: 254 QYPIVHGIVTNWDDMVKIWHHNFYNELRVVPDEDPVLLTDAALN 385
+YPI HGIVTNWDDM KIWHH FYNELRV P+E PVLLT+A LN
Sbjct: 69 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 112
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 147 bits (356), Expect = 3e-36
Identities = 68/71 (95%), Positives = 69/71 (97%)
Frame = +3
Query: 51 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 230
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 231 SKRGILTLNTP 263
SKRGILTL P
Sbjct: 61 SKRGILTLKYP 71
Score = 85.0 bits (201), Expect = 2e-17
Identities = 35/44 (79%), Positives = 38/44 (86%)
Frame = +2
Query: 254 QYPIVHGIVTNWDDMVKIWHHNFYNELRVVPDEDPVLLTDAALN 385
+YPI HGIVTNWDDM KIWHH FYNELRV P+E PVLLT+A LN
Sbjct: 69 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 112
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 147 bits (356), Expect = 3e-36
Identities = 68/71 (95%), Positives = 69/71 (97%)
Frame = +3
Query: 51 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 230
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 231 SKRGILTLNTP 263
SKRGILTL P
Sbjct: 61 SKRGILTLKYP 71
Score = 38.3 bits (85), Expect = 0.002
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 254 QYPIVHGIVTNWDDMVKI 307
+YPI HGIVTNWDDM KI
Sbjct: 69 KYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 147 bits (356), Expect = 3e-36
Identities = 68/71 (95%), Positives = 69/71 (97%)
Frame = +3
Query: 51 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 230
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 231 SKRGILTLNTP 263
SKRGILTL P
Sbjct: 61 SKRGILTLKYP 71
Score = 38.3 bits (85), Expect = 0.002
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 254 QYPIVHGIVTNWDDMVKI 307
+YPI HGIVTNWDDM KI
Sbjct: 69 KYPIEHGIVTNWDDMEKI 86
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 146 bits (353), Expect = 6e-36
Identities = 67/71 (94%), Positives = 69/71 (97%)
Frame = +3
Query: 51 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 230
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 231 SKRGILTLNTP 263
SKRGILTL P
Sbjct: 61 SKRGILTLKYP 71
Score = 85.0 bits (201), Expect = 2e-17
Identities = 35/44 (79%), Positives = 38/44 (86%)
Frame = +2
Query: 254 QYPIVHGIVTNWDDMVKIWHHNFYNELRVVPDEDPVLLTDAALN 385
+YPI HGIVTNWDDM KIWHH FYNELRV P+E PVLLT+A LN
Sbjct: 69 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 112
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 146 bits (353), Expect = 6e-36
Identities = 67/71 (94%), Positives = 69/71 (97%)
Frame = +3
Query: 51 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 230
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 231 SKRGILTLNTP 263
SKRGILTL P
Sbjct: 61 SKRGILTLKYP 71
Score = 38.3 bits (85), Expect = 0.002
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 254 QYPIVHGIVTNWDDMVKI 307
+YPI HGIVTNWDDM KI
Sbjct: 69 KYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 146 bits (353), Expect = 6e-36
Identities = 67/71 (94%), Positives = 69/71 (97%)
Frame = +3
Query: 51 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 230
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 231 SKRGILTLNTP 263
SKRGILTL P
Sbjct: 61 SKRGILTLKYP 71
Score = 35.5 bits (78), Expect = 0.013
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = +2
Query: 254 QYPIVHGIVTNWDDM 298
+YPI HGIVTNWDDM
Sbjct: 69 KYPIEHGIVTNWDDM 83
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 144 bits (349), Expect = 2e-35
Identities = 65/71 (91%), Positives = 69/71 (97%)
Frame = +3
Query: 51 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 230
MCD++VAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 231 SKRGILTLNTP 263
SKRGILTL P
Sbjct: 61 SKRGILTLKYP 71
Score = 85.0 bits (201), Expect = 2e-17
Identities = 35/44 (79%), Positives = 38/44 (86%)
Frame = +2
Query: 254 QYPIVHGIVTNWDDMVKIWHHNFYNELRVVPDEDPVLLTDAALN 385
+YPI HGIVTNWDDM KIWHH FYNELRV P+E PVLLT+A LN
Sbjct: 69 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 112
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 140 bits (340), Expect = 2e-34
Identities = 65/69 (94%), Positives = 67/69 (97%)
Frame = +3
Query: 57 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 236
+EE+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 237 RGILTLNTP 263
RGILTL P
Sbjct: 62 RGILTLKYP 70
Score = 84.6 bits (200), Expect = 2e-17
Identities = 34/44 (77%), Positives = 38/44 (86%)
Frame = +2
Query: 254 QYPIVHGIVTNWDDMVKIWHHNFYNELRVVPDEDPVLLTDAALN 385
+YPI HGIVTNWDDM KIWHH FYNELR+ P+E PVLLT+A LN
Sbjct: 68 KYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLN 111
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 108 bits (260), Expect = 1e-24
Identities = 50/53 (94%), Positives = 51/53 (96%)
Frame = +3
Query: 105 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLNTP 263
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL P
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 57
Score = 85.0 bits (201), Expect = 2e-17
Identities = 35/44 (79%), Positives = 38/44 (86%)
Frame = +2
Query: 254 QYPIVHGIVTNWDDMVKIWHHNFYNELRVVPDEDPVLLTDAALN 385
+YPI HGIVTNWDDM KIWHH FYNELRV P+E PVLLT+A LN
Sbjct: 55 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 98
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 85.0 bits (201), Expect = 2e-17
Identities = 35/44 (79%), Positives = 38/44 (86%)
Frame = +2
Query: 254 QYPIVHGIVTNWDDMVKIWHHNFYNELRVVPDEDPVLLTDAALN 385
+YPI HGIVTNWDDM KIWHH FYNELRV P+E PVLLT+A LN
Sbjct: 25 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 68
Score = 54.4 bits (125), Expect = 3e-08
Identities = 25/27 (92%), Positives = 25/27 (92%)
Frame = +3
Query: 183 MVGMGQKDSYVGDEAQSKRGILTLNTP 263
MVGMGQKDSYVGDEAQSKRGILTL P
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYP 27
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 67.3 bits (157), Expect = 4e-12
Identities = 28/63 (44%), Positives = 43/63 (68%)
Frame = +3
Query: 75 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 254
+V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G D ++G +A+S RG+ ++
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKAESNRGLFSI 70
Query: 255 NTP 263
P
Sbjct: 71 EYP 73
Score = 61.7 bits (143), Expect = 2e-10
Identities = 26/45 (57%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
Frame = +2
Query: 254 QYPIVHGIVTNWDDMVKIWHHNF-YNELRVVPDEDPVLLTDAALN 385
+YP+ HGIV NW DM KIW + F ++L++ P+E PVLLTDA LN
Sbjct: 71 EYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLN 115
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 54.4 bits (125), Expect = 3e-08
Identities = 28/65 (43%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Frame = +3
Query: 75 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRGIL 248
+VVDNG+G K G+AG + P +FPS+VGRP R + + KD VG+E R +L
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQML 68
Query: 249 TLNTP 263
+N P
Sbjct: 69 DINYP 73
Score = 48.8 bits (111), Expect = 1e-06
Identities = 23/47 (48%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Frame = +2
Query: 248 DPQYPIVHGIVTNWDDMVKIWHHNFYNE-LRVVPDEDPVLLTDAALN 385
D YP+ +GIV NWDDM +W H F E L + P E +LLT+ LN
Sbjct: 69 DINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLN 115
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 46.0 bits (104), Expect = 9e-06
Identities = 20/45 (44%), Positives = 27/45 (60%)
Frame = +2
Query: 254 QYPIVHGIVTNWDDMVKIWHHNFYNELRVVPDEDPVLLTDAALNT 388
+YPI HGIV +WD M + W + LR P++ LLT+ LNT
Sbjct: 82 KYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPPLNT 126
Score = 36.7 bits (81), Expect = 0.006
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +3
Query: 51 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 158
M ++ A V+DNG+G K G+AG+ P+ + PS +
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAI 36
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 33.5 bits (73), Expect = 0.054
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +3
Query: 60 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 158
+EV+ LV D GS + GFAG++ P+ PS +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
Score = 31.9 bits (69), Expect = 0.17
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +2
Query: 272 GIVTNWDDMVKIWHHNFYNELRVVPDEDPVLLTDAALN 385
G++ +W+ KI H++ N L P E PVL ++++ N
Sbjct: 97 GLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWN 134
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 33.1 bits (72), Expect = 0.071
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = -3
Query: 241 PLLLCASSPTYESFCPMPTITP*WRGLPTIEGN-TARGASSPAKPALHIPEPLSTTNAAT 65
PL++ +SS S TITP +G+PT N S+P P + STT A +
Sbjct: 464 PLVVSSSSSGSSSTVVTSTITPSTQGVPTSTSNQPTPSTSNPTTPKSTVTASPSTTGATS 523
Query: 64 SSS 56
++S
Sbjct: 524 TAS 526
>U10401-4|AAN65289.1| 937|Caenorhabditis elegans Myc and mondo-like
protein 1, isoformb protein.
Length = 937
Score = 30.3 bits (65), Expect = 0.50
Identities = 15/52 (28%), Positives = 28/52 (53%)
Frame = -3
Query: 220 SPTYESFCPMPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAAT 65
SPTY++F T P P+ G+ + AS P + + H P+ ++ +A++
Sbjct: 670 SPTYQAFAASVTTKPSILESPSTSGDISGPASVPVQASQHPPKIITPPSASS 721
>U10401-3|AAA19059.2| 1009|Caenorhabditis elegans Myc and mondo-like
protein 1, isoforma protein.
Length = 1009
Score = 30.3 bits (65), Expect = 0.50
Identities = 15/52 (28%), Positives = 28/52 (53%)
Frame = -3
Query: 220 SPTYESFCPMPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAAT 65
SPTY++F T P P+ G+ + AS P + + H P+ ++ +A++
Sbjct: 670 SPTYQAFAASVTTKPSILESPSTSGDISGPASVPVQASQHPPKIITPPSASS 721
>AF264757-1|AAK20949.1| 1009|Caenorhabditis elegans Mlx interactor
protein.
Length = 1009
Score = 30.3 bits (65), Expect = 0.50
Identities = 15/52 (28%), Positives = 28/52 (53%)
Frame = -3
Query: 220 SPTYESFCPMPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAAT 65
SPTY++F T P P+ G+ + AS P + + H P+ ++ +A++
Sbjct: 670 SPTYQAFAASVTTKPSILESPSTSGDISGPASVPVQASQHPPKIITPPSASS 721
>AF213473-1|AAL50027.1| 913|Caenorhabditis elegans basic
helix-loop-helix leucinezipper WBSCR14-like protein
protein.
Length = 913
Score = 30.3 bits (65), Expect = 0.50
Identities = 15/52 (28%), Positives = 28/52 (53%)
Frame = -3
Query: 220 SPTYESFCPMPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAAT 65
SPTY++F T P P+ G+ + AS P + + H P+ ++ +A++
Sbjct: 574 SPTYQAFAASVTTKPSILESPSTSGDISGPASVPVQASQHPPKIITPPSASS 625
>U42848-3|AAA83609.1| 693|Caenorhabditis elegans Hypothetical
protein C31H1.1 protein.
Length = 693
Score = 29.9 bits (64), Expect = 0.67
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = +3
Query: 210 YVGDEAQSKRGILTLNTPSYTESSLTGMTW*RFGIITSTMSSVLSPTKIPSFSLMLPST 386
Y+GD++ + L + SS G W R TS S+ PT I S L +PS+
Sbjct: 99 YLGDKSGFESRTLPSESIMSANSSSLGSHWKRIDSFTSGKSTQSIPTTISSKPLTIPSS 157
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 29.5 bits (63), Expect = 0.88
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = +2
Query: 260 PIVHGIVTNWDDMVKIWHHNFYNELRVVPDEDPVLLTD 373
PI G V NWD +IW F + V + LTD
Sbjct: 62 PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTD 98
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 29.5 bits (63), Expect = 0.88
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = +2
Query: 260 PIVHGIVTNWDDMVKIWHHNFYNELRVVPDEDPVLLTD 373
PI G V NWD +IW F + V + LTD
Sbjct: 62 PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTD 98
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 29.1 bits (62), Expect = 1.2
Identities = 19/59 (32%), Positives = 28/59 (47%)
Frame = +3
Query: 3 RIYVLVTYLIILY*FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 179
R YV ++ LI + F + AL N KA + G D P+A F I+G ++G
Sbjct: 16 RKYVTLSLLIYNFYFNL------ALGTINCFHFIKASYLGHDTPQATFREIIGNKEYRG 68
>U88165-4|AAR30207.1| 700|Caenorhabditis elegans Maternal effect
sterile protein3, isoform b protein.
Length = 700
Score = 27.9 bits (59), Expect = 2.7
Identities = 21/84 (25%), Positives = 32/84 (38%)
Frame = +3
Query: 132 PRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLNTPSYTESSLTGMTW*RFG 311
P + GR R V + K S + K +L + PS SS G +
Sbjct: 3 PATAEVKVGGRKRKNDEPVFIKTKQSRSARREEEKENLLNKSLPSTPTSSEAGSSRESSN 62
Query: 312 IITSTMSSVLSPTKIPSFSLMLPS 383
+TS+ PTK+ + LP+
Sbjct: 63 PVTSSSRRKNPPTKLENIQKTLPT 86
>U88165-3|AAK21393.1| 754|Caenorhabditis elegans Maternal effect
sterile protein3, isoform a protein.
Length = 754
Score = 27.9 bits (59), Expect = 2.7
Identities = 21/84 (25%), Positives = 32/84 (38%)
Frame = +3
Query: 132 PRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLNTPSYTESSLTGMTW*RFG 311
P + GR R V + K S + K +L + PS SS G +
Sbjct: 3 PATAEVKVGGRKRKNDEPVFIKTKQSRSARREEEKENLLNKSLPSTPTSSEAGSSRESSN 62
Query: 312 IITSTMSSVLSPTKIPSFSLMLPS 383
+TS+ PTK+ + LP+
Sbjct: 63 PVTSSSRRKNPPTKLENIQKTLPT 86
>U34812-1|AAB01719.1| 754|Caenorhabditis elegans MES-3 protein.
Length = 754
Score = 27.9 bits (59), Expect = 2.7
Identities = 21/84 (25%), Positives = 32/84 (38%)
Frame = +3
Query: 132 PRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLNTPSYTESSLTGMTW*RFG 311
P + GR R V + K S + K +L + PS SS G +
Sbjct: 3 PATAEVKVGGRKRKNDEPVFIKTKQSRSARREEEKENLLNKSLPSTPTSSEAGSSRESSN 62
Query: 312 IITSTMSSVLSPTKIPSFSLMLPS 383
+TS+ PTK+ + LP+
Sbjct: 63 PVTSSSRRKNPPTKLENIQKTLPT 86
>U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone
methyltransferase-likeprotein 1, isoform b protein.
Length = 1590
Score = 27.5 bits (58), Expect = 3.6
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +3
Query: 330 SSVLSPTKIPSFSLMLPSTP 389
SS P IPSFS+ LP TP
Sbjct: 226 SSEADPRTIPSFSIPLPDTP 245
>U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone
methyltransferase-likeprotein 1, isoform a protein.
Length = 1604
Score = 27.5 bits (58), Expect = 3.6
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +3
Query: 330 SSVLSPTKIPSFSLMLPSTP 389
SS P IPSFS+ LP TP
Sbjct: 240 SSEADPRTIPSFSIPLPDTP 259
>AF288812-1|AAG10199.1| 566|Caenorhabditis elegans synembryn
protein.
Length = 566
Score = 27.5 bits (58), Expect = 3.6
Identities = 10/35 (28%), Positives = 20/35 (57%)
Frame = -2
Query: 191 ADHHTLMAGPSDDRGEYGARSIISCETGLAHTGAI 87
+DH + +AG S+++ EY A ++ + TG +
Sbjct: 494 SDHGSALAGMSEEQKEYEAMKLVDAMNQMMETGIV 528
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 27.5 bits (58), Expect = 3.6
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -3
Query: 130 ASSPAKPALHIPEPLSTTNAATSS 59
+SSPA P++ P P +T++ +TSS
Sbjct: 652 SSSPATPSISGPPPCATSSGSTSS 675
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 27.5 bits (58), Expect = 3.6
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -3
Query: 130 ASSPAKPALHIPEPLSTTNAATSS 59
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 27.5 bits (58), Expect = 3.6
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -3
Query: 130 ASSPAKPALHIPEPLSTTNAATSS 59
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 27.5 bits (58), Expect = 3.6
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -3
Query: 130 ASSPAKPALHIPEPLSTTNAATSS 59
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AC084158-34|AAK68564.1| 566|Caenorhabditis elegans Resistance to
inhibitors of cholinesteraseprotein 8, isoform a
protein.
Length = 566
Score = 27.5 bits (58), Expect = 3.6
Identities = 10/35 (28%), Positives = 20/35 (57%)
Frame = -2
Query: 191 ADHHTLMAGPSDDRGEYGARSIISCETGLAHTGAI 87
+DH + +AG S+++ EY A ++ + TG +
Sbjct: 494 SDHGSALAGMSEEQKEYEAMKLVDAMNQMMETGIV 528
>AC024776-1|AAK68468.1| 338|Caenorhabditis elegans Hypothetical
protein Y41D4B.18 protein.
Length = 338
Score = 26.6 bits (56), Expect = 6.2
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = -3
Query: 226 ASSPTYESFCPMPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSS 59
A S T + P PT P G PT A+SP + +P+S++ ++TSS
Sbjct: 236 APSSTASTSTPAPTNLPTTTGAPTNSTTNPPTATSPKTSS----QPVSSSTSSTSS 287
>AF067608-11|AAC17656.2| 368|Caenorhabditis elegans Hypothetical
protein B0511.11 protein.
Length = 368
Score = 26.2 bits (55), Expect = 8.2
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = -2
Query: 221 VSYVRVFLSHADHHTLMAGPSDDRGEYGARS 129
+++ RVF S+ H + GP D G + R+
Sbjct: 275 INWFRVFFSYPKHKSFEDGPEDTFGNFRRRN 305
>AF040653-12|AAB95023.2| 257|Caenorhabditis elegans Hypothetical
protein K05F6.10 protein.
Length = 257
Score = 26.2 bits (55), Expect = 8.2
Identities = 12/44 (27%), Positives = 21/44 (47%)
Frame = +2
Query: 185 GRHGTERLVRRRRGTEQKRYPDPQYPIVHGIVTNWDDMVKIWHH 316
GR GT ++ R+ T +P P+ HG + + ++W H
Sbjct: 87 GREGTRQVRRQDDTTPGITKSEPISPLGHGSIMQARRLEEVWKH 130
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,577,230
Number of Sequences: 27780
Number of extensions: 221805
Number of successful extensions: 838
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 781
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 837
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 587646290
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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