Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0543
         (390 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    23   1.6  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    21   3.8  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   3.8  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   3.8  
AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    21   3.8  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   5.0  
DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.              21   5.0  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   5.0  
DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.               20   8.7  

>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 22.6 bits (46), Expect = 1.6
 Identities = 17/47 (36%), Positives = 21/47 (44%)
 Frame = -1

Query: 225 PRLLRTSLSVPCRPSHPDGGAFRRSRGIRREEHHLLRNRPCTYRSHC 85
           PR++    +V CR S P G A   S    R E  L     C Y +HC
Sbjct: 704 PRIMDLD-NVMCRTSGPRGVAI-VSASTARSEQFL-----CRYEAHC 743


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +2

Query: 245 PDPQYPIVHGIVTNWDDMVKIW 310
           PD  +  V     N+ D+VKIW
Sbjct: 63  PDAMFSQVLKKAENFKDVVKIW 84


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 8/29 (27%), Positives = 14/29 (48%)
 Frame = -2

Query: 194  HADHHTLMAGPSDDRGEYGARSIISCETG 108
            H   H      +DD+  +  R ++SC +G
Sbjct: 1686 HCTIHRTQVKETDDKICFTMRPVVSCASG 1714


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
 Frame = -3

Query: 295 VIPVSDDSVYDGVLRVRIPLL--LCASSPTYE 206
           V PV ++  YD    +RIP++  L  S P  E
Sbjct: 168 VDPVEENETYDEFDTIRIPIVRSLSKSPPNDE 199


>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +3

Query: 96  GMCKAGFAGD 125
           GMCK G +GD
Sbjct: 130 GMCKEGISGD 139


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -1

Query: 114 NRPCTYRSHCLLPTRQLPR 58
           N   TY + CLL  ++ PR
Sbjct: 478 NMAATYMNECLLNIQKSPR 496


>DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.
          Length = 145

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -3

Query: 385 VEGSISEKDGIFVGDNTE 332
           V+ +ISE  GI  GDN E
Sbjct: 108 VQKAISECKGIAKGDNCE 125


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +2

Query: 179 CDGRHGTERLVRRRRGTEQKRY 244
           CDG+ G    ++  +GTE  +Y
Sbjct: 493 CDGKPGLCDAMKPTKGTELLKY 514


>DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.
          Length = 152

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -2

Query: 236 FALCLVSYVRV 204
           F LC+VSY+ V
Sbjct: 9   FTLCIVSYMMV 19


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,382
Number of Sequences: 438
Number of extensions: 2681
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9514659
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)