Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0543
(390 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 124 3e-29
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 124 3e-29
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 124 3e-29
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 124 3e-29
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 124 3e-29
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 124 3e-29
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 119 6e-28
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 119 6e-28
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 119 6e-28
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 114 2e-26
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 77 4e-15
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 73 7e-14
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 64 4e-11
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 60 7e-10
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 57 5e-09
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 44 4e-05
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 43 8e-05
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 34 0.039
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 34 0.039
At3g48010.1 68416.m05234 cyclic nucleotide-regulated ion channel... 28 1.9
At3g16260.1 68416.m02051 metallo-beta-lactamase family protein 28 2.6
At5g27870.1 68418.m03343 pectinesterase family protein similar t... 27 3.4
At5g06610.1 68418.m00747 expressed protein contains Pfam profile... 27 3.4
At4g01535.1 68417.m00199 hypothetical protein 27 3.4
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 27 3.4
At4g25900.1 68417.m03724 aldose 1-epimerase family protein simil... 27 4.5
At5g52530.2 68418.m06518 dentin sialophosphoprotein-related cont... 26 7.8
At5g52530.1 68418.m06517 dentin sialophosphoprotein-related cont... 26 7.8
At3g48860.2 68416.m05337 expressed protein 26 7.8
At3g48860.1 68416.m05336 expressed protein 26 7.8
At3g07870.1 68416.m00962 F-box family protein contains F-box dom... 26 7.8
At2g41890.1 68415.m05181 curculin-like (mannose-binding) lectin ... 26 7.8
At2g03240.1 68415.m00277 EXS family protein / ERD1/XPR1/SYG1 fam... 26 7.8
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 124 bits (298), Expect = 3e-29
Identities = 57/68 (83%), Positives = 61/68 (89%)
Frame = +3
Query: 60 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 239
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 240 GILTLNTP 263
GILTL P
Sbjct: 65 GILTLKYP 72
Score = 83.0 bits (196), Expect = 6e-17
Identities = 34/44 (77%), Positives = 37/44 (84%)
Frame = +2
Query: 254 QYPIVHGIVTNWDDMVKIWHHNFYNELRVVPDEDPVLLTDAALN 385
+YPI HGIV NWDDM KIWHH FYNELRV P+E PVLLT+A LN
Sbjct: 70 KYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 113
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 124 bits (298), Expect = 3e-29
Identities = 57/68 (83%), Positives = 61/68 (89%)
Frame = +3
Query: 60 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 239
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 240 GILTLNTP 263
GILTL P
Sbjct: 65 GILTLKYP 72
Score = 83.4 bits (197), Expect = 5e-17
Identities = 34/44 (77%), Positives = 38/44 (86%)
Frame = +2
Query: 254 QYPIVHGIVTNWDDMVKIWHHNFYNELRVVPDEDPVLLTDAALN 385
+YPI HGIV+NWDDM KIWHH FYNELRV P+E PVLLT+A LN
Sbjct: 70 KYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 113
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 124 bits (298), Expect = 3e-29
Identities = 57/68 (83%), Positives = 61/68 (89%)
Frame = +3
Query: 60 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 239
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 240 GILTLNTP 263
GILTL P
Sbjct: 65 GILTLKYP 72
Score = 82.6 bits (195), Expect = 8e-17
Identities = 33/44 (75%), Positives = 37/44 (84%)
Frame = +2
Query: 254 QYPIVHGIVTNWDDMVKIWHHNFYNELRVVPDEDPVLLTDAALN 385
+YPI HGIV NWDDM KIWHH FYNELRV P+E P+LLT+A LN
Sbjct: 70 KYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLN 113
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 124 bits (298), Expect = 3e-29
Identities = 57/68 (83%), Positives = 61/68 (89%)
Frame = +3
Query: 60 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 239
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 240 GILTLNTP 263
GILTL P
Sbjct: 65 GILTLKYP 72
Score = 83.0 bits (196), Expect = 6e-17
Identities = 34/44 (77%), Positives = 37/44 (84%)
Frame = +2
Query: 254 QYPIVHGIVTNWDDMVKIWHHNFYNELRVVPDEDPVLLTDAALN 385
+YPI HGIV NWDDM KIWHH FYNELRV P+E PVLLT+A LN
Sbjct: 70 KYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 113
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 124 bits (298), Expect = 3e-29
Identities = 57/68 (83%), Positives = 61/68 (89%)
Frame = +3
Query: 60 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 239
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 240 GILTLNTP 263
GILTL P
Sbjct: 65 GILTLKYP 72
Score = 83.4 bits (197), Expect = 5e-17
Identities = 34/44 (77%), Positives = 38/44 (86%)
Frame = +2
Query: 254 QYPIVHGIVTNWDDMVKIWHHNFYNELRVVPDEDPVLLTDAALN 385
+YPI HGIV+NWDDM KIWHH FYNELRV P+E PVLLT+A LN
Sbjct: 70 KYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 113
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 124 bits (298), Expect = 3e-29
Identities = 57/68 (83%), Positives = 61/68 (89%)
Frame = +3
Query: 60 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 239
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 240 GILTLNTP 263
GILTL P
Sbjct: 65 GILTLKYP 72
Score = 82.6 bits (195), Expect = 8e-17
Identities = 33/44 (75%), Positives = 37/44 (84%)
Frame = +2
Query: 254 QYPIVHGIVTNWDDMVKIWHHNFYNELRVVPDEDPVLLTDAALN 385
+YPI HGIV NWDDM KIWHH FYNELRV P+E P+LLT+A LN
Sbjct: 70 KYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLN 113
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 119 bits (287), Expect = 6e-28
Identities = 53/68 (77%), Positives = 60/68 (88%)
Frame = +3
Query: 60 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 239
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 240 GILTLNTP 263
GILTL P
Sbjct: 65 GILTLKYP 72
Score = 82.6 bits (195), Expect = 8e-17
Identities = 32/44 (72%), Positives = 38/44 (86%)
Frame = +2
Query: 254 QYPIVHGIVTNWDDMVKIWHHNFYNELRVVPDEDPVLLTDAALN 385
+YPI HG+V+NWDDM KIWHH FYNELR+ P+E PVLLT+A LN
Sbjct: 70 KYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLN 113
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 119 bits (287), Expect = 6e-28
Identities = 53/68 (77%), Positives = 60/68 (88%)
Frame = +3
Query: 60 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 239
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 240 GILTLNTP 263
GILTL P
Sbjct: 65 GILTLKYP 72
Score = 82.6 bits (195), Expect = 8e-17
Identities = 32/44 (72%), Positives = 38/44 (86%)
Frame = +2
Query: 254 QYPIVHGIVTNWDDMVKIWHHNFYNELRVVPDEDPVLLTDAALN 385
+YPI HG+V+NWDDM KIWHH FYNELR+ P+E PVLLT+A LN
Sbjct: 70 KYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLN 113
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 119 bits (287), Expect = 6e-28
Identities = 53/68 (77%), Positives = 60/68 (88%)
Frame = +3
Query: 60 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 239
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 240 GILTLNTP 263
GILTL P
Sbjct: 65 GILTLKYP 72
Score = 82.6 bits (195), Expect = 8e-17
Identities = 32/44 (72%), Positives = 38/44 (86%)
Frame = +2
Query: 254 QYPIVHGIVTNWDDMVKIWHHNFYNELRVVPDEDPVLLTDAALN 385
+YPI HG+V+NWDDM KIWHH FYNELR+ P+E PVLLT+A LN
Sbjct: 70 KYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLN 113
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 114 bits (274), Expect = 2e-26
Identities = 50/68 (73%), Positives = 61/68 (89%)
Frame = +3
Query: 60 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 239
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD++VGDEAQ++R
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQARR 65
Query: 240 GILTLNTP 263
GIL+L P
Sbjct: 66 GILSLKYP 73
Score = 80.6 bits (190), Expect = 3e-16
Identities = 31/44 (70%), Positives = 38/44 (86%)
Frame = +2
Query: 254 QYPIVHGIVTNWDDMVKIWHHNFYNELRVVPDEDPVLLTDAALN 385
+YPI HG+V+NWDDM KIWHH FYNELR+ P+E P+LLT+A LN
Sbjct: 71 KYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLN 114
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 77.0 bits (181), Expect = 4e-15
Identities = 30/43 (69%), Positives = 37/43 (86%)
Frame = +2
Query: 257 YPIVHGIVTNWDDMVKIWHHNFYNELRVVPDEDPVLLTDAALN 385
YP+ HG+V+NWDDM KIW+H FY+ELRV P+E PVLLT+A LN
Sbjct: 26 YPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPVLLTEAPLN 68
Score = 37.9 bits (84), Expect = 0.002
Identities = 15/27 (55%), Positives = 22/27 (81%)
Frame = +3
Query: 183 MVGMGQKDSYVGDEAQSKRGILTLNTP 263
MVGM + D +VGD+A+++ GILTL+ P
Sbjct: 1 MVGMNENDLFVGDDAEARSGILTLDYP 27
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 72.9 bits (171), Expect = 7e-14
Identities = 30/42 (71%), Positives = 34/42 (80%)
Frame = +2
Query: 260 PIVHGIVTNWDDMVKIWHHNFYNELRVVPDEDPVLLTDAALN 385
P+ HGIV NWDDM KIWH+ FYNELRV P+E PVLLT+A N
Sbjct: 61 PMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHPVLLTEAPYN 102
Score = 70.5 bits (165), Expect = 4e-13
Identities = 33/63 (52%), Positives = 42/63 (66%)
Frame = +3
Query: 75 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 254
+V D G GM +AGFAGD+AP+ VFP +VGRPR G+ +SYVG+E + R ILTL
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEEGHANRDILTL 58
Query: 255 NTP 263
P
Sbjct: 59 KDP 61
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 63.7 bits (148), Expect = 4e-11
Identities = 26/53 (49%), Positives = 35/53 (66%)
Frame = +2
Query: 227 TEQKRYPDPQYPIVHGIVTNWDDMVKIWHHNFYNELRVVPDEDPVLLTDAALN 385
+E + D YP+ +GIV NWDDM +W H FYNEL++ P + +LLTD LN
Sbjct: 60 SELRHQLDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLN 112
Score = 54.4 bits (125), Expect = 3e-08
Identities = 27/65 (41%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Frame = +3
Query: 75 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRGIL 248
+V DNG+G K GFAG++ P +VFP +VGRP R++ ++ KD VG+ R L
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGETCSELRHQL 66
Query: 249 TLNTP 263
+N P
Sbjct: 67 DINYP 71
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 59.7 bits (138), Expect = 7e-10
Identities = 30/69 (43%), Positives = 43/69 (62%)
Frame = +3
Query: 60 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 239
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG G+ + + E+ ++
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVGAIDGNGMDIDDAANTTEDAKESDKEK 64
Query: 240 GILTLNTPS 266
G L T S
Sbjct: 65 GKRKLYTGS 73
Score = 44.4 bits (100), Expect = 3e-05
Identities = 19/43 (44%), Positives = 26/43 (60%)
Frame = +2
Query: 260 PIVHGIVTNWDDMVKIWHHNFYNELRVVPDEDPVLLTDAALNT 388
P GIVT+WD + +W H F N L + P E P+LL + LN+
Sbjct: 88 PTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLAEPPLNS 130
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 56.8 bits (131), Expect = 5e-09
Identities = 23/34 (67%), Positives = 31/34 (91%)
Frame = +3
Query: 60 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 161
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
Score = 44.8 bits (101), Expect = 2e-05
Identities = 20/43 (46%), Positives = 27/43 (62%)
Frame = +2
Query: 260 PIVHGIVTNWDDMVKIWHHNFYNELRVVPDEDPVLLTDAALNT 388
PI GIV++WD + IW H F + L + P E P+LL + LNT
Sbjct: 94 PIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLNT 136
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 44.0 bits (99), Expect = 4e-05
Identities = 21/49 (42%), Positives = 31/49 (63%)
Frame = +3
Query: 75 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD 221
+V+DNG+ + G+AG+ PR VF +IV RPRH+ G+ + VGD
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHKAT----GETVTIVGD 66
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 42.7 bits (96), Expect = 8e-05
Identities = 22/63 (34%), Positives = 32/63 (50%)
Frame = +2
Query: 194 GTERLVRRRRGTEQKRYPDPQYPIVHGIVTNWDDMVKIWHHNFYNELRVVPDEDPVLLTD 373
G E L + R + + YPI HG V +WD M + W +N LR P++ LLT+
Sbjct: 71 GDEALAKSRSSSTHNLH----YPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTE 126
Query: 374 AAL 382
+ L
Sbjct: 127 SPL 129
Score = 35.9 bits (79), Expect = 0.010
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +3
Query: 72 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 158
A+V+DNG+G K GFAG+ P + P++V
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 33.9 bits (74), Expect = 0.039
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = -3
Query: 196 PMPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSS 59
P P I P RGL +G T+ +SSPA+P + +P +ST + TS+
Sbjct: 290 PTPDIKP-TRGLIVYQGATS--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 33.9 bits (74), Expect = 0.039
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +2
Query: 260 PIVHGIVTNWDDMVKIWHHNFYNELRVVPDEDPVLLTDAALN 385
PI G + N D +IW H F + L + P +LLT+A L+
Sbjct: 64 PIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLS 105
Score = 32.7 bits (71), Expect = 0.090
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 75 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 167
+V+DNG G+ KAG G+ P V P+ + +P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
>At3g48010.1 68416.m05234 cyclic nucleotide-regulated ion channel,
putative (CNGC16) similar to cyclic nucleotide and
calmodulin-regulated ion channel (cngc6) GI:4581207 from
[Arabidopsis thaliana]
Length = 705
Score = 28.3 bits (60), Expect = 1.9
Identities = 14/40 (35%), Positives = 25/40 (62%)
Frame = -3
Query: 388 GVEGSISEKDGIFVGDNTELIVEVMMPNLHHVIPVSDDSV 269
G SI+ + G F G+ EL+ ++PN++H +P+S +V
Sbjct: 513 GFFNSITLRPGDFCGE--ELLTWALVPNINHNLPLSTRTV 550
>At3g16260.1 68416.m02051 metallo-beta-lactamase family protein
Length = 937
Score = 27.9 bits (59), Expect = 2.6
Identities = 28/77 (36%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Frame = -2
Query: 266 RWGIEGQDTSFALCLVSYVRVFLSHADHHTLMAGPSDDRGEYGARSIISCETGLAHTGAI 87
R+G+EG D A+ + + + HADHHT +A R R ++ GLAH AI
Sbjct: 615 RYGLEGADE--AVRNLRCIWISHIHADHHTGLARILARR-----RELLK---GLAHEPAI 664
Query: 86 VYYQRG--NFLVAHLEL 42
V R NFL A+ L
Sbjct: 665 VVGPRSLKNFLDAYQRL 681
>At5g27870.1 68418.m03343 pectinesterase family protein similar to
pectinesterase (EC 3.1.1.11) from Salix gilgiana
GI:6714532, Lycopersicon esculentum SP|Q43143, Phaseolus
vulgaris SP|Q43111; contains Pfam profile PF01095
pectinesterase
Length = 732
Score = 27.5 bits (58), Expect = 3.4
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
Frame = +3
Query: 159 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLNTPSYTESSLTGMTW*RFGIITSTMSSV 338
G P G+ G G +S V + S + ++PS + T G + T SSV
Sbjct: 555 GVPYILGLFSGNGSTNSTVTGSSLSSNTTESSDSPSTVVTPSTSPPAGHLGSPSDTPSSV 614
Query: 339 LSP-TKIPSFSL-MLPSTP 389
+SP T +P+ L P+TP
Sbjct: 615 VSPSTSLPAGQLGAPPATP 633
>At5g06610.1 68418.m00747 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620)
Length = 368
Score = 27.5 bits (58), Expect = 3.4
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -3
Query: 172 WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 50
WR P + + A+GA P + AL +PL+ ++ +S+ +
Sbjct: 167 WRYTPWLGDHAAKGAIRPLRRALQGLDPLTISSVFSSAQFV 207
>At4g01535.1 68417.m00199 hypothetical protein
Length = 137
Score = 27.5 bits (58), Expect = 3.4
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = +2
Query: 8 LRTCHLFNNTILIQDVRRGSCRVGSRQWL 94
+ + +L NT +++D + +C GS+ WL
Sbjct: 13 IESLNLLKNTTVLEDQGKWNCEFGSKLWL 41
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 27.5 bits (58), Expect = 3.4
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +3
Query: 72 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGR 164
ALVVD GS KAG A D +P + PS + R
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR 34
>At4g25900.1 68417.m03724 aldose 1-epimerase family protein similar
to apospory-associated protein C; APOC [Chlamydomonas
reinhardtii] GI:6970044 Pfam profile PF01263: Aldose
1-epimerase
Length = 318
Score = 27.1 bits (57), Expect = 4.5
Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
Frame = +2
Query: 230 EQKRYPDPQYPIVHG--IVTNWDDMVKIWHHNFYNELRVVPDED-PVLLTDAALNT 388
E K P P H IV + ++ +KIW H F LRV D + LT NT
Sbjct: 119 ETKPPPLPSLSTAHVDLIVRSSNEDLKIWPHKFEYRLRVALGHDGDLTLTSRVKNT 174
>At5g52530.2 68418.m06518 dentin sialophosphoprotein-related
contains weak similarity to dentin sialophosphoprotein
precursor (Dentin matrix protein-3) (DMP- 3)
(Swiss-Prot:P97399) [Mus musculus]
Length = 828
Score = 26.2 bits (55), Expect = 7.8
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +2
Query: 155 RRKAPPSGCDGRHGTERLVRRRRGTEQKRYPDPQ 256
R ++PP G ER+ R R QKR+P Q
Sbjct: 671 RNRSPPPPPGGFRADERMTERVRLPFQKRFPADQ 704
>At5g52530.1 68418.m06517 dentin sialophosphoprotein-related
contains weak similarity to dentin sialophosphoprotein
precursor (Dentin matrix protein-3) (DMP- 3)
(Swiss-Prot:P97399) [Mus musculus]
Length = 828
Score = 26.2 bits (55), Expect = 7.8
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +2
Query: 155 RRKAPPSGCDGRHGTERLVRRRRGTEQKRYPDPQ 256
R ++PP G ER+ R R QKR+P Q
Sbjct: 671 RNRSPPPPPGGFRADERMTERVRLPFQKRFPADQ 704
>At3g48860.2 68416.m05337 expressed protein
Length = 577
Score = 26.2 bits (55), Expect = 7.8
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -3
Query: 151 EGNTARGASSPAKPALHIPEPLSTTNAATSSSH 53
E + R AS+ KPA H P +S+T + +S+ +
Sbjct: 82 EDLSLRFASASLKPARHAPSSISSTGSNSSNGN 114
>At3g48860.1 68416.m05336 expressed protein
Length = 494
Score = 26.2 bits (55), Expect = 7.8
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -3
Query: 151 EGNTARGASSPAKPALHIPEPLSTTNAATSSSH 53
E + R AS+ KPA H P +S+T + +S+ +
Sbjct: 82 EDLSLRFASASLKPARHAPSSISSTGSNSSNGN 114
>At3g07870.1 68416.m00962 F-box family protein contains F-box domain
Pfam:PF00646
Length = 417
Score = 26.2 bits (55), Expect = 7.8
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = -3
Query: 172 WRGLPTIEGNTARGASSPAKPA--LHIPEPL 86
WR + T G + +SSP KP LH P+
Sbjct: 55 WRSVLTQHGRLSSSSSSPTKPCLLLHCDSPI 85
>At2g41890.1 68415.m05181 curculin-like (mannose-binding) lectin
family protein / PAN domain-containing protein contains
Pfam profiles: PF01453 lectin (probable mannose
binding), PF00024 PAN domain
Length = 764
Score = 26.2 bits (55), Expect = 7.8
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +3
Query: 60 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM 185
E++ A + + G G+C A +D + V I GR +GV+
Sbjct: 632 EDLEAKLTEYGFGLCAADKDVEDFGKTVLALITGRYEPEGVV 673
>At2g03240.1 68415.m00277 EXS family protein / ERD1/XPR1/SYG1 family
protein similar to PHO1 protein [Arabidopsis thaliana]
GI:20069032; contains Pfam profiles PF03105: SPX domain,
PF03124: EXS family
Length = 823
Score = 26.2 bits (55), Expect = 7.8
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = -3
Query: 283 SDDSVYDGVLRVRIPLLLCASSPTYES 203
SDD + +G+ V P+L+ ++S YE+
Sbjct: 94 SDDDIEEGIKHVTAPILINSASHGYET 120
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,150,639
Number of Sequences: 28952
Number of extensions: 214210
Number of successful extensions: 625
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 596
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 624
length of database: 12,070,560
effective HSP length: 73
effective length of database: 9,957,064
effective search space used: 557595584
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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