Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0541
         (686 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    25   0.77 
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    25   0.77 
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    23   3.1  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    22   4.1  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    22   4.1  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    22   5.4  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    22   5.4  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   7.2  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   7.2  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   9.5  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   9.5  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   9.5  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   9.5  

>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 24.6 bits (51), Expect = 0.77
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -2

Query: 628 LTFNFITITYNHWMNIECLNLPV 560
           LT+N     Y +W+N+ CLNL +
Sbjct: 46  LTYNNTNRKY-YWLNVCCLNLSI 67


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 24.6 bits (51), Expect = 0.77
 Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = -1

Query: 248 LLPSVD*VTAKFISQERKQENQ-HQNHCCIKLR*TRTALQLNSYCC 114
           ++P++D  T+ +     KQ  Q +QN C +K    R   + N+Y C
Sbjct: 467 VVPTLD-ATSYYAKDLEKQRQQCNQNKCPVKRGNGRCDEECNTYAC 511


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 13/23 (56%), Positives = 18/23 (78%), Gaps = 2/23 (8%)
 Frame = -3

Query: 309 TKLIVITFL-FLAKI-FWYILIT 247
           TKL+V+TFL F+ KI  + I+IT
Sbjct: 285 TKLVVVTFLKFIKKIQIFGIMIT 307


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/30 (26%), Positives = 14/30 (46%)
 Frame = +1

Query: 373 YFAIRLYQNHGAADSIGNKTYDIATLITTH 462
           +F    Y N+ A   +  + ++IA    TH
Sbjct: 223 FFVSHKYTNYSAVQDLHRRGHEIAVFSLTH 252


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/30 (26%), Positives = 14/30 (46%)
 Frame = +1

Query: 373 YFAIRLYQNHGAADSIGNKTYDIATLITTH 462
           +F    Y N+ A   +  + ++IA    TH
Sbjct: 230 FFVSHKYTNYSAVQDLHRRGHEIAVFSLTH 259


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = +1

Query: 373 YFAIRLYQNHGAADSIGNKTYDIATLITTH 462
           +F    Y N+ A   +  K ++IA    TH
Sbjct: 231 FFVSHKYTNYSAVQEMHRKGHEIAVHSITH 260


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -2

Query: 265 LVHTYYCYHQSTKLLRNS 212
           +V T  CY + T+LLR+S
Sbjct: 228 VVSTLSCYLERTELLRSS 245


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 12/45 (26%), Positives = 19/45 (42%)
 Frame = +2

Query: 41  TMSRRLGDEPRNPARDLPRTPLSANSSSYLIVMQFEFTGALYNND 175
           T  R   D+  N  +       S+NSS+Y     ++F    + ND
Sbjct: 542 TYLRTAWDKFTNMQQQFAYIDESSNSSNYFANKTYDFHNMSFEND 586


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = +2

Query: 308 VCTLQPSELVQHIPHNGNDCTIILPSASIKIT 403
           +CT+  +  V+HI    N C+ I      K T
Sbjct: 316 ICTIMSAAAVEHILSIVNTCSQIPSEVEDKYT 347


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -2

Query: 661 LCTNILLAGMRLTFNFITITYNH 593
           LCT +L  G R+ ++  +  Y H
Sbjct: 843 LCTLLLQRGYRVEYSAASDAYTH 865


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -2

Query: 661 LCTNILLAGMRLTFNFITITYNH 593
           LCT +L  G R+ ++  +  Y H
Sbjct: 843 LCTLLLQRGYRVEYSAASDAYTH 865


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -2

Query: 661 LCTNILLAGMRLTFNFITITYNH 593
           LCT +L  G R+ ++  +  Y H
Sbjct: 843 LCTLLLQRGYRVEYSAASDAYTH 865


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -2

Query: 661 LCTNILLAGMRLTFNFITITYNH 593
           LCT +L  G R+ ++  +  Y H
Sbjct: 843 LCTLLLQRGYRVEYSAASDAYTH 865


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,724
Number of Sequences: 336
Number of extensions: 3003
Number of successful extensions: 15
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)