Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0537
         (552 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    27   0.17 
AJ876408-1|CAI45289.1|   52|Apis mellifera putative diuretic hor...    24   0.89 
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    23   1.6  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   2.7  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    22   4.8  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    21   8.3  

>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 26.6 bits (56), Expect = 0.17
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +3

Query: 159 LPQPTMANTDLTRLLKSDEIRKVLRAPNKRV 251
           LP P   N  L  L+ S E+R+  +APN  V
Sbjct: 490 LPPPYRLNKPLMSLITSSEVRQPGKAPNYSV 520


>AJ876408-1|CAI45289.1|   52|Apis mellifera putative diuretic
           hormone-I protein.
          Length = 52

 Score = 24.2 bits (50), Expect = 0.89
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +2

Query: 323 VLKRKAILELRRRKNLKALADAD 391
           VL+++ +LEL RRK L+  A  D
Sbjct: 19  VLRQRVLLELARRKALQDQAQID 41


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = +3

Query: 57  HLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLP 164
           H   +  WT ++     P  G +KT SK    F+LP
Sbjct: 25  HRPAWWFWTATSHEASAPAEGKFKTVSKVPGPFSLP 60


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +1

Query: 259  YTQIEPAH*QQGDAETQS 312
            YT  +PA+ QQG A+ Q+
Sbjct: 997  YTPPQPANAQQGQAQAQA 1014


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 7/26 (26%), Positives = 14/26 (53%)
 Frame = -2

Query: 239 GSTEDLPDLIRLEKTCEVSVGHRWLG 162
           GS +++  ++R  K C  +    W+G
Sbjct: 349 GSDQEVAGVMRAVKRCNATGAFSWIG 374


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = +1

Query: 112 YSGHGRHHQNKRRTSTC 162
           YS +  HH    R S+C
Sbjct: 435 YSAYSLHHVRSSRESSC 451


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,675
Number of Sequences: 438
Number of extensions: 2049
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15827139
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)