Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0535
         (613 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    28   0.27 
AF063021-1|AAC16246.1|   69|Anopheles gambiae unknown protein.         25   1.9  
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       25   2.5  
L10440-1|AAA29360.1|  154|Anopheles gambiae transposase protein.       23   7.8  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    23   7.8  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    23   7.8  

>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score = 27.9 bits (59), Expect = 0.27
 Identities = 20/73 (27%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
 Frame = +1

Query: 184  VYSIPSLQRRRWSLCSSKAVWHNTGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVI-- 357
            +  +P+ +   W L   K + H   RW +   E+L  L + A+ N +  +++  RLVI  
Sbjct: 1619 IADVPTNRLNHWRLIQ-KHMQHIWNRWHR---EYLSTLQKRAKWNKNAISIEPGRLVILQ 1674

Query: 358  -DHIQVNRAPCLR 393
             D++ V++ P  R
Sbjct: 1675 EDNVAVSKWPMAR 1687


>AF063021-1|AAC16246.1|   69|Anopheles gambiae unknown protein.
          Length = 69

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = -1

Query: 145 TTERHLSVCHCGLICVLKVNTEV*TTRFA*FRRVIRLP 32
           TT++H SVC     C  +V  EV  +R   FRR++  P
Sbjct: 16  TTDQHSSVCGALCDCAARVQVEV-FSRI--FRRLLTKP 50


>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
 Frame = -1

Query: 325 CQRLIQRSSITARGIRRISWASDPCC--AKLLCLSTATNAAVE 203
           CQ L   S ++    +RI    DPCC   +L C ++A    +E
Sbjct: 50  CQPLSNISEVSLEPGQRIRRELDPCCEILRLYCDTSACPPLIE 92


>L10440-1|AAA29360.1|  154|Anopheles gambiae transposase protein.
          Length = 154

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +3

Query: 348 ASYRPHSGKSRALPTQTYIPCSRS 419
           A+ RPH  K + L  Q   PC +S
Sbjct: 112 AAKRPHMKKKKVLFHQDNAPCHKS 135


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1248

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 11/40 (27%), Positives = 18/40 (45%)
 Frame = -1

Query: 313  IQRSSITARGIRRISWASDPCCAKLLCLSTATNAAVEATE 194
            IQ ++     + ++ W  D      L  ST+  AAV A +
Sbjct: 1002 IQEAARRITTVLQLRWREDKAALNALANSTSAEAAVNAEQ 1041


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 14/30 (46%), Positives = 15/30 (50%)
 Frame = +1

Query: 139 PSCCSLPQKRD*KERVYSIPSLQRRRWSLC 228
           PS   L   R     VYS+    RRRWSLC
Sbjct: 9   PSGARLSISRGSPTGVYSV----RRRWSLC 34


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 639,054
Number of Sequences: 2352
Number of extensions: 12879
Number of successful extensions: 29
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 59711994
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)