Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0531
(663 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_01_0103 + 1082077-1082167,1083037-1085477 117 1e-26
02_04_0017 + 18937774-18937864,18938505-18940945 117 1e-26
01_06_0662 + 30987187-30987277,30987825-30990214 116 2e-26
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 95 6e-20
06_03_0715 - 23823427-23823525,23823616-23823822,23823907-238240... 94 1e-19
03_05_0511 + 25056018-25059107 72 5e-13
02_04_0148 - 20198407-20201424 69 3e-12
04_04_0640 - 26891552-26891725,26891814-26892326,26892698-268936... 53 2e-07
03_05_0044 + 20203644-20204054,20204695-20204916,20205092-202051... 48 5e-06
02_02_0474 + 10738476-10738797,10739568-10739677,10739891-107400... 31 0.62
07_03_1279 + 25415971-25416540 30 1.9
09_06_0318 - 22274966-22275144,22275846-22276812,22276890-22277093 29 4.4
03_06_0370 + 33431696-33432217,33432521-33432796,33433003-334331... 28 5.8
01_01_0016 - 88825-90411 28 5.8
03_01_0085 + 690618-691012,691114-691193,691775-691959,692363-69... 28 7.6
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 117 bits (281), Expect = 1e-26
Identities = 54/82 (65%), Positives = 67/82 (81%)
Frame = +2
Query: 11 RRCLYACLLTAQPRLMEPVNLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVK 190
RR +YA LTA+PRL+EPV L EIQ PE A+GGIYGVLN++RGHVFEE Q GTP++ +K
Sbjct: 711 RRVIYASQLTAKPRLLEPVYLVEIQAPENALGGIYGVLNQKRGHVFEEMQRPGTPLYNIK 770
Query: 191 AYLPVNESFGFTADLRSNTGGR 256
AYLPV ESFGF++ LR+ T G+
Sbjct: 771 AYLPVIESFGFSSQLRAATSGQ 792
Score = 56.0 bits (129), Expect = 3e-08
Identities = 23/39 (58%), Positives = 28/39 (71%)
Frame = +1
Query: 256 AFPQCVFDHWQVLPGDPCEPQSKPYNVVQETRKRKGLKE 372
AFPQCVFDHW ++ DP E S+ +V + RKRKGLKE
Sbjct: 793 AFPQCVFDHWDMMTSDPLEVSSQANQLVLDIRKRKGLKE 831
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 117 bits (281), Expect = 1e-26
Identities = 54/82 (65%), Positives = 67/82 (81%)
Frame = +2
Query: 11 RRCLYACLLTAQPRLMEPVNLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVK 190
RR +YA LTA+PRL+EPV L EIQ PE A+GGIYGVLN++RGHVFEE Q GTP++ +K
Sbjct: 711 RRVIYASQLTAKPRLLEPVYLVEIQAPENALGGIYGVLNQKRGHVFEEMQRPGTPLYNIK 770
Query: 191 AYLPVNESFGFTADLRSNTGGR 256
AYLPV ESFGF++ LR+ T G+
Sbjct: 771 AYLPVIESFGFSSQLRAATSGQ 792
Score = 58.4 bits (135), Expect = 5e-09
Identities = 24/39 (61%), Positives = 29/39 (74%)
Frame = +1
Query: 256 AFPQCVFDHWQVLPGDPCEPQSKPYNVVQETRKRKGLKE 372
AFPQCVFDHW ++ DP E S+ +VQ+ RKRKGLKE
Sbjct: 793 AFPQCVFDHWDMMTSDPLEAGSQASTLVQDIRKRKGLKE 831
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 116 bits (279), Expect = 2e-26
Identities = 54/82 (65%), Positives = 66/82 (80%)
Frame = +2
Query: 11 RRCLYACLLTAQPRLMEPVNLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVK 190
RR +YA LTA+PRL+EPV L EIQ PE A+GGIY VLN++RGHVFEE Q GTP++ +K
Sbjct: 709 RRVIYAAQLTAKPRLLEPVYLVEIQAPENALGGIYSVLNQKRGHVFEEMQRPGTPLYNIK 768
Query: 191 AYLPVNESFGFTADLRSNTGGR 256
AYLPV ESFGFT+ LR+ T G+
Sbjct: 769 AYLPVIESFGFTSTLRAATSGQ 790
Score = 34.7 bits (76), Expect = 0.066
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +1
Query: 256 AFPQCVFDHWQVLPGDPCEPQSK 324
AFP VFDHW++L DP EP ++
Sbjct: 791 AFPLFVFDHWEMLSVDPLEPGTR 813
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 94.7 bits (225), Expect = 6e-20
Identities = 44/82 (53%), Positives = 57/82 (69%)
Frame = +2
Query: 11 RRCLYACLLTAQPRLMEPVNLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVK 190
RR +YA LTA PRLMEP+ +IQ P+ AVG +YGVLN R G + EES+ GTP+ ++
Sbjct: 721 RRAMYAAQLTASPRLMEPMYQVDIQVPKTAVGNVYGVLNSRNGELVEESERTGTPLSNLR 780
Query: 191 AYLPVNESFGFTADLRSNTGGR 256
YLPV +SF FT LR+ T G+
Sbjct: 781 FYLPVAKSFDFTEKLRAETSGQ 802
Score = 52.0 bits (119), Expect = 4e-07
Identities = 20/39 (51%), Positives = 27/39 (69%)
Frame = +1
Query: 256 AFPQCVFDHWQVLPGDPCEPQSKPYNVVQETRKRKGLKE 372
AFPQC+F HWQ + DP + S+ V+ + RKRKGLK+
Sbjct: 803 AFPQCIFHHWQTMRSDPFQEGSEAAKVITDIRKRKGLKD 841
>06_03_0715 - 23823427-23823525,23823616-23823822,23823907-23824017,
23824124-23824322,23824410-23824495,23824940-23825098,
23825204-23825302,23825385-23826578,23826666-23826734,
23828042-23828812
Length = 997
Score = 93.9 bits (223), Expect = 1e-19
Identities = 46/82 (56%), Positives = 56/82 (68%)
Frame = +2
Query: 11 RRCLYACLLTAQPRLMEPVNLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVK 190
RR +Y+ L A PRLMEPV EIQ P V IY VL+RRRGHV + GTP+++VK
Sbjct: 837 RRVVYSAFLMANPRLMEPVYYIEIQTPIDCVSAIYTVLSRRRGHVTADVPKPGTPIYVVK 896
Query: 191 AYLPVNESFGFTADLRSNTGGR 256
A+LPV ESFGF DLR +T G+
Sbjct: 897 AFLPVIESFGFETDLRYHTQGQ 918
Score = 32.3 bits (70), Expect = 0.35
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 12/51 (23%)
Frame = +1
Query: 256 AFPQCVFDHWQVLPGD---------PCEP---QSKPYNVVQETRKRKGLKE 372
AF VFDHW ++PGD P EP Q + +TR+RKG+ E
Sbjct: 919 AFCLSVFDHWAIVPGDPLDKNIVLRPLEPAPIQHLAREFMVKTRRRKGMSE 969
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 71.7 bits (168), Expect = 5e-13
Identities = 35/86 (40%), Positives = 49/86 (56%)
Frame = +2
Query: 5 ATRRCLYACLLTAQPRLMEPVNLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFI 184
A + ++ +PRL+E + CE+ P +G Y VL+R+R V +E GT +F
Sbjct: 872 AVKEACREAVVQNKPRLVEAMYFCELTTPTEQLGATYAVLSRKRARVLKEEMQEGTSLFT 931
Query: 185 VKAYLPVNESFGFTADLRSNTGGRPS 262
V AYLPV ES GF+ +LRS T G S
Sbjct: 932 VHAYLPVAESVGFSNELRSVTAGAAS 957
>02_04_0148 - 20198407-20201424
Length = 1005
Score = 69.3 bits (162), Expect = 3e-12
Identities = 35/86 (40%), Positives = 47/86 (54%)
Frame = +2
Query: 5 ATRRCLYACLLTAQPRLMEPVNLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFI 184
A R A +L ++PRL+EP+ CE+ P +G +Y VL R V +E GT +F
Sbjct: 848 AVREACQAAILESKPRLVEPMYFCELTTPTEQLGSMYAVLGNCRARVLKEEMQEGTSLFT 907
Query: 185 VKAYLPVNESFGFTADLRSNTGGRPS 262
V AYL V ES F+ LR+ T G S
Sbjct: 908 VHAYLSVAESSEFSKKLRNATAGAAS 933
>04_04_0640 -
26891552-26891725,26891814-26892326,26892698-26893644,
26893778-26894114,26894413-26894462,26895020-26895248
Length = 749
Score = 53.2 bits (122), Expect = 2e-07
Identities = 32/86 (37%), Positives = 44/86 (51%)
Frame = +2
Query: 5 ATRRCLYACLLTAQPRLMEPVNLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFI 184
A R L A PRL+EP+ E+ PE +G + G LN RRG V G + +
Sbjct: 635 AARGAFREGLRKAGPRLLEPIMKVEVITPEEHLGDVIGDLNSRRGQVNSFGDKPG-GLKV 693
Query: 185 VKAYLPVNESFGFTADLRSNTGGRPS 262
V A++P+ E F + + LR T GR S
Sbjct: 694 VDAFVPLAEMFQYVSTLRGMTKGRAS 719
>03_05_0044 +
20203644-20204054,20204695-20204916,20205092-20205130,
20206275-20206396,20206489-20206639,20207892-20207963,
20208256-20208351,20208861-20208949,20209068-20209134,
20210197-20210235,20210369-20210429,20210572-20210681,
20210766-20210840,20210914-20210982,20213126-20213247,
20214682-20214807,20214897-20215017,20215133-20215233,
20215564-20215624,20216560-20216613,20217585-20217689
Length = 770
Score = 48.4 bits (110), Expect = 5e-06
Identities = 24/76 (31%), Positives = 41/76 (53%)
Frame = +2
Query: 29 CLLTAQPRLMEPVNLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVN 208
C A+P ++EPV E++ P G + G +N+R+G + Q +V ++P+N
Sbjct: 665 CYAAARPVILEPVMKVELKVPTEFQGTVTGDMNKRKGIIVGNDQEGDDT--VVVCHVPLN 722
Query: 209 ESFGFTADLRSNTGGR 256
FG++ LRS T G+
Sbjct: 723 NMFGYSTALRSMTQGK 738
>02_02_0474 +
10738476-10738797,10739568-10739677,10739891-10740094,
10740400-10740576,10740659-10740811,10741535-10741624,
10741939-10742049,10742169-10742285,10742881-10743032,
10743116-10743200,10743597-10743691,10744211-10744376,
10744459-10744654,10745662-10745795
Length = 703
Score = 31.5 bits (68), Expect = 0.62
Identities = 18/84 (21%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Frame = +2
Query: 38 TAQPRLMEPVNLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESF 217
T +L EP + ++ PE +G + +L +RRG + + ++K +P
Sbjct: 497 TVDGKLQEPYEIAAVEVPEEYMGSVVELLGKRRGQMVDMQPSGPEGTTLLKYKIPTRGLI 556
Query: 218 GF-TADLRSNTGGRPSRSAYSTIG 286
G A L ++ G + + + G
Sbjct: 557 GLRNAVLTASRGTAILNTIFDSYG 580
>07_03_1279 + 25415971-25416540
Length = 189
Score = 29.9 bits (64), Expect = 1.9
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +2
Query: 92 EVAVGGIYGVLNRRRGHVFEESQVAG-TPMFIVKAYLPVNESFGFTADLRSNTGGRPSRS 268
+VA G L R R ++ E A T + +V + L NE+FG A L P R+
Sbjct: 28 DVAAAGGRDKLTRIRVYMHERFAGANATALAVVPSPLGANEAFGRVAVLDDELRDGPDRA 87
Query: 269 AYSTIGR 289
+ + IGR
Sbjct: 88 SSALIGR 94
>09_06_0318 - 22274966-22275144,22275846-22276812,22276890-22277093
Length = 449
Score = 28.7 bits (61), Expect = 4.4
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = -1
Query: 285 PMVEYALREGRPPVLERKSAVKPNDSLTGR*AFTMNIGVPATWDSSKT*P 136
P+ ++AL +GR +E + V+P ++ G + + ATW + T P
Sbjct: 230 PLRDFALVQGRIKYIEMQVHVRPGSAING--TYASQGWIAATWSAPPTNP 277
>03_06_0370 +
33431696-33432217,33432521-33432796,33433003-33433183,
33433253-33433455,33433545-33433732,33433844-33434105
Length = 543
Score = 28.3 bits (60), Expect = 5.8
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +3
Query: 213 RSVLLPICVPTPADGLPAVRIRPLAGPPWRP 305
RS P +P DG + RI LA PP RP
Sbjct: 9 RSGARPASLPLRVDGAASQRIASLAAPPRRP 39
>01_01_0016 - 88825-90411
Length = 528
Score = 28.3 bits (60), Expect = 5.8
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +2
Query: 251 GRPSRSAYSTIGRSSLETRANLRASPTTLYRKRER 355
G P R+ + ++ +L+ R + PTTL+ +R R
Sbjct: 194 GYPQRTIFDSLAADALDYRVYFKTIPTTLFYRRLR 228
>03_01_0085 +
690618-691012,691114-691193,691775-691959,692363-693320,
693391-693518,693951-694010,694113-694163,694704-694821,
694990-695915,695916-697707,697810-697943,698029-698526
Length = 1774
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = -1
Query: 351 SRFLYNVVGLALRFARVSREDLPMVEYALREGRPP 247
S+FL +++GL + + + E L +V R GRPP
Sbjct: 53 SQFLGSIIGLPAQPPQATAEALAVVGVKRRRGRPP 87
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,533,908
Number of Sequences: 37544
Number of extensions: 380727
Number of successful extensions: 989
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 963
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 987
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1667659452
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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