Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0531
(663 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 153 1e-37
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 153 1e-37
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 88 5e-18
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 88 5e-18
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 44 7e-05
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 40 0.002
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 29 2.9
Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 27 9.0
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 27 9.0
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 153 bits (370), Expect = 1e-37
Identities = 70/82 (85%), Positives = 75/82 (91%)
Frame = +2
Query: 11 RRCLYACLLTAQPRLMEPVNLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVK 190
RR YA +LTA+PRL+EPV L EIQCPE AVGGIYGVLNRRRGHVFEESQV GTPMF+VK
Sbjct: 720 RRVFYASVLTAEPRLLEPVYLVEIQCPEAAVGGIYGVLNRRRGHVFEESQVTGTPMFVVK 779
Query: 191 AYLPVNESFGFTADLRSNTGGR 256
AYLPVNESFGFTADLRSNTGG+
Sbjct: 780 AYLPVNESFGFTADLRSNTGGQ 801
Score = 77.8 bits (183), Expect = 6e-15
Identities = 32/42 (76%), Positives = 36/42 (85%)
Frame = +1
Query: 256 AFPQCVFDHWQVLPGDPCEPQSKPYNVVQETRKRKGLKEGLP 381
AFPQCVFDHWQVLPGDP E +KP +V +TRKRKGLKEG+P
Sbjct: 802 AFPQCVFDHWQVLPGDPLEAGTKPNQIVLDTRKRKGLKEGVP 843
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 153 bits (370), Expect = 1e-37
Identities = 70/82 (85%), Positives = 75/82 (91%)
Frame = +2
Query: 11 RRCLYACLLTAQPRLMEPVNLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVK 190
RR YA +LTA+PRL+EPV L EIQCPE AVGGIYGVLNRRRGHVFEESQV GTPMF+VK
Sbjct: 720 RRVFYASVLTAEPRLLEPVYLVEIQCPEAAVGGIYGVLNRRRGHVFEESQVTGTPMFVVK 779
Query: 191 AYLPVNESFGFTADLRSNTGGR 256
AYLPVNESFGFTADLRSNTGG+
Sbjct: 780 AYLPVNESFGFTADLRSNTGGQ 801
Score = 77.8 bits (183), Expect = 6e-15
Identities = 32/42 (76%), Positives = 36/42 (85%)
Frame = +1
Query: 256 AFPQCVFDHWQVLPGDPCEPQSKPYNVVQETRKRKGLKEGLP 381
AFPQCVFDHWQVLPGDP E +KP +V +TRKRKGLKEG+P
Sbjct: 802 AFPQCVFDHWQVLPGDPLEAGTKPNQIVLDTRKRKGLKEGVP 843
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 88.2 bits (209), Expect = 5e-18
Identities = 39/82 (47%), Positives = 53/82 (64%)
Frame = +2
Query: 11 RRCLYACLLTAQPRLMEPVNLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVK 190
RRC Y+ L A PRLMEP E+ P V +Y VL +RRGHV ++ + G+PM+ +
Sbjct: 817 RRCAYSAFLMATPRLMEPYYTVEVVAPADCVAAVYTVLAKRRGHVTTDAPMPGSPMYTIS 876
Query: 191 AYLPVNESFGFTADLRSNTGGR 256
AY+PV +SFGF DLR +T G+
Sbjct: 877 AYIPVMDSFGFETDLRIHTQGQ 898
Score = 31.5 bits (68), Expect = 0.55
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 12/51 (23%)
Frame = +1
Query: 256 AFPQCVFDHWQVLPGDPCEP---------QSKPY---NVVQETRKRKGLKE 372
AF F HWQ++PGDP + Q P+ + +TR+RKGL E
Sbjct: 899 AFCMSAFHHWQLVPGDPLDKSIVIKTLDVQPTPHLAREFMIKTRRRKGLSE 949
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 88.2 bits (209), Expect = 5e-18
Identities = 39/82 (47%), Positives = 53/82 (64%)
Frame = +2
Query: 11 RRCLYACLLTAQPRLMEPVNLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVK 190
RRC Y+ L A PRLMEP E+ P V +Y VL +RRGHV ++ + G+PM+ +
Sbjct: 692 RRCAYSAFLMATPRLMEPYYTVEVVAPADCVAAVYTVLAKRRGHVTTDAPMPGSPMYTIS 751
Query: 191 AYLPVNESFGFTADLRSNTGGR 256
AY+PV +SFGF DLR +T G+
Sbjct: 752 AYIPVMDSFGFETDLRIHTQGQ 773
Score = 31.5 bits (68), Expect = 0.55
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 12/51 (23%)
Frame = +1
Query: 256 AFPQCVFDHWQVLPGDPCEP---------QSKPY---NVVQETRKRKGLKE 372
AF F HWQ++PGDP + Q P+ + +TR+RKGL E
Sbjct: 774 AFCMSAFHHWQLVPGDPLDKSIVIKTLDVQPTPHLAREFMIKTRRRKGLSE 824
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 44.4 bits (100), Expect = 7e-05
Identities = 24/71 (33%), Positives = 36/71 (50%)
Frame = +2
Query: 50 RLMEPVNLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTA 229
RL+ + C + A+G ++ VL++R+ V E T +F V + +PV ESF F
Sbjct: 753 RLVAAMYRCTVTTASQALGKVHAVLSQRKSKVLSEDINEATNLFEVVSLMPVVESFSFCD 812
Query: 230 DLRSNTGGRPS 262
LR T G S
Sbjct: 813 QLRKFTSGMAS 823
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 39.9 bits (89), Expect = 0.002
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 4/111 (3%)
Frame = +2
Query: 53 LMEPVNLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTAD 232
L+EP+ E P G + L +R + G I +A P+++ FG+T++
Sbjct: 642 LLEPIMKVEATVPTEFQGNVVTSLTQRNALITTTDSTEGYATVICEA--PLSDMFGYTSE 699
Query: 233 LRSNTGGRPSRS-AYSTIGRSSLETRANLRASPTTLY---RKRERGKD*RK 373
LRS T G+ S YS ++LE + ++A L+ E+GK +K
Sbjct: 700 LRSLTEGKGEFSMEYSRYAPTTLEAQDRVQAEWRQLHGIADPNEKGKKKKK 750
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 29.1 bits (62), Expect = 2.9
Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
Frame = +2
Query: 11 RRCLYACLLTAQPRLMEPVNLCEIQCP-EVAVGGIYGVLNRRRGHVFEESQVAGTPMFIV 187
++C+ L + + L EPV +I+ + I L RRR H T + +
Sbjct: 578 QKCVSEALSSGEMVLTEPVMEVQIEIRNDDPTQPILNELLRRRAHFEHSDATESTEIRRI 637
Query: 188 KAYLPVNESFGFTADLRSNTGG 253
A LP++E+ + +R+ T G
Sbjct: 638 CAILPLSETENLSKTVRTLTSG 659
>Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical protein
W01F3.3 protein.
Length = 2175
Score = 28.3 bits (60), Expect = 5.1
Identities = 20/64 (31%), Positives = 25/64 (39%), Gaps = 2/64 (3%)
Frame = +1
Query: 157 PGGRYTYVHCEGLPTCQ*VVRFYCR--FAFQHRRTAFPQCVFDHWQVLPGDPCEPQSKPY 330
P G T + E LP C + R CR H R +C+ Q P P P +P
Sbjct: 955 PPGSITSIPKESLPNCPPLDRSACRDPCMMFHNRQGCEECICP--QTAPTPPHVPTGRPT 1012
Query: 331 NVVQ 342
V Q
Sbjct: 1013 TVGQ 1016
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 27.9 bits (59), Expect = 6.8
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +2
Query: 143 VFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGRPS 262
V E T +F V + +PV ESF F LR T G S
Sbjct: 595 VLSEDINEATNLFEVVSLMPVVESFSFCDQLRKFTSGMAS 634
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 27.5 bits (58), Expect = 9.0
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +3
Query: 222 LLPICVPTPADGLPAVRIRPLAGPPWRP 305
L+P VPTP++G P + RP P RP
Sbjct: 812 LIPTRVPTPSNGAPEIPARPQV--PKRP 837
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 27.5 bits (58), Expect = 9.0
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +3
Query: 222 LLPICVPTPADGLPAVRIRPLAGPPWRP 305
L+P VPTP++G P + RP P RP
Sbjct: 812 LIPTRVPTPSNGAPEIPARPQV--PKRP 837
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,250,316
Number of Sequences: 27780
Number of extensions: 335849
Number of successful extensions: 785
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 741
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 785
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1486926498
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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