Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0529
         (513 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0932 + 12495700-12495738,12495859-12496093,12496178-124964...    29   2.9  
12_02_0820 + 23437811-23440230,23440336-23440534                       28   3.8  
05_03_0478 - 14526180-14526578                                         28   3.8  
02_05_0981 - 33278735-33278746,33278882-33279022,33279145-332791...    28   5.1  
02_05_0377 + 28408751-28409113,28409545-28410129,28411212-28411385     28   5.1  
05_06_0263 + 26752759-26754393                                         27   6.7  
08_02_0749 - 20769224-20770535,20770649-20771510,20771622-207732...    27   8.8  

>03_02_0932 +
           12495700-12495738,12495859-12496093,12496178-12496423,
           12496519-12496572,12497329-12497589,12497750-12497802,
           12497893-12498016,12498147-12498401,12498798-12499888,
           12500001-12500007,12500316-12500445,12500617-12500731,
           12500783-12500853,12501246-12501354,12501550-12501738,
           12502519-12502644,12503048-12503563
          Length = 1206

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = -1

Query: 324 EVRFDIANSYCSSDVTDNDVVCEETEAVASA 232
           +VRF I +   S +  DN  V EE EA+A+A
Sbjct: 701 QVRFFIDSHVASPEAADNKQVAEELEALAAA 731


>12_02_0820 + 23437811-23440230,23440336-23440534
          Length = 872

 Score = 28.3 bits (60), Expect = 3.8
 Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
 Frame = -1

Query: 450 DELGDVLQNTADLGC-VVRQVDRDLL*EVVDGWSNFASEEIDLEVRFDIANSYCSSDVTD 274
           D+L   +Q+  ++    VR  +  +  + ++ WS+   EEI      DI + Y S    D
Sbjct: 252 DKLATYMQDIFNITAKAVRGDEESVALQAIEFWSSICDEEI------DILDEYSSEFTAD 305

Query: 273 NDVVC 259
           +DV C
Sbjct: 306 SDVPC 310


>05_03_0478 - 14526180-14526578
          Length = 132

 Score = 28.3 bits (60), Expect = 3.8
 Identities = 17/38 (44%), Positives = 18/38 (47%), Gaps = 3/38 (7%)
 Frame = +3

Query: 348 SWTSRQQLPREDPCLPDGLRS---RGQPCSGVRRPTRH 452
           SW  RQ+   ED    DG R    RGQ     RRP RH
Sbjct: 54  SWARRQRRDEEDHRQHDGYRGARRRGQEDHRRRRPRRH 91


>02_05_0981 -
           33278735-33278746,33278882-33279022,33279145-33279199,
           33279787-33279950,33280043-33280139,33280507-33280678,
           33281107-33281182,33281545-33281661,33281928-33282007,
           33282225-33282398,33282636-33282765,33282855-33282941,
           33283039-33283302,33284131-33284256
          Length = 564

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 22/99 (22%), Positives = 44/99 (44%), Gaps = 3/99 (3%)
 Frame = -1

Query: 438 DVLQNTADLGCVVRQVDRDLL*EVVDGWSNFASEEIDLE---VRFDIANSYCSSDVTDND 268
           D LQ     GC +  +  D+  ++  G   F ++   +E    R+D   + C  D+  N 
Sbjct: 368 DQLQQLMKNGCPLVGIS-DITCDI-GGSIEFVNKSTSIERPFFRYDPCTNSCHDDMEGNG 425

Query: 267 VVCEETEAVASATTFSRASPPEAKDLRTRLKMRISPSAE 151
           V+C   + +   T FS+ +     D+ ++   R++ + E
Sbjct: 426 VICLAVDIL--PTEFSKEASQHFGDILSKFVARLASAKE 462


>02_05_0377 + 28408751-28409113,28409545-28410129,28411212-28411385
          Length = 373

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 15/62 (24%), Positives = 29/62 (46%)
 Frame = -1

Query: 315 FDIANSYCSSDVTDNDVVCEETEAVASATTFSRASPPEAKDLRTRLKMRISPSAEPTDAE 136
           FD A ++C +D+       E+    ++A   + A+PP  K    R + +   S E T+ +
Sbjct: 32  FDNAAAFCDADILGATATGEKEATSSAAAAAAEAAPPRKK---RRRRAKSCKSREETETQ 88

Query: 135 TL 130
            +
Sbjct: 89  RM 90


>05_06_0263 + 26752759-26754393
          Length = 544

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 4/38 (10%)
 Frame = +1

Query: 313 KSNLQINLFGREVGPAVNNFLEKIP----VYLTDYAAE 414
           K +L+ NLFG E G A++  L K+P    +YL+D   E
Sbjct: 331 KLDLRDNLFGVEAGLALSKTLSKLPDLVELYLSDLNLE 368


>08_02_0749 - 20769224-20770535,20770649-20771510,20771622-20773263,
            20773357-20773701,20773858-20773952,20774218-20774344,
            20774430-20774435
          Length = 1462

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +2

Query: 5    GASAIINFSGRVTDVKADDFSSLHLR 82
            G+SA +N S RV D   DD SSL  +
Sbjct: 929  GSSATVNQSERVNDGLGDDLSSLRTK 954


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,062,100
Number of Sequences: 37544
Number of extensions: 219616
Number of successful extensions: 704
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 693
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 704
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1106928780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)