Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0529
(513 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45977| Best HMM Match : MBT (HMM E-Value=0) 32 0.24
SB_7302| Best HMM Match : DUF910 (HMM E-Value=2.2) 31 0.74
SB_19364| Best HMM Match : zf-C5HC2 (HMM E-Value=5) 29 3.0
SB_38797| Best HMM Match : Extensin_2 (HMM E-Value=2.3) 28 5.2
SB_31470| Best HMM Match : SAND (HMM E-Value=5e-37) 28 5.2
SB_15610| Best HMM Match : DUF1174 (HMM E-Value=7.8) 28 5.2
SB_56858| Best HMM Match : AT_hook (HMM E-Value=3.7) 27 6.9
SB_52167| Best HMM Match : Extensin_2 (HMM E-Value=3.6) 27 6.9
SB_39727| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_35595| Best HMM Match : AT_hook (HMM E-Value=3.7) 27 6.9
SB_34667| Best HMM Match : AT_hook (HMM E-Value=3.7) 27 6.9
SB_32994| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_17624| Best HMM Match : rve (HMM E-Value=2.2e-11) 27 6.9
SB_7962| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_2435| Best HMM Match : WD40 (HMM E-Value=4.1e-10) 27 6.9
SB_53291| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_33158| Best HMM Match : rve (HMM E-Value=7.5e-05) 27 6.9
SB_769| Best HMM Match : Retrotrans_gag (HMM E-Value=0.32) 27 6.9
SB_34944| Best HMM Match : DUF1087 (HMM E-Value=6.9) 27 9.1
SB_12646| Best HMM Match : SSrecog (HMM E-Value=0) 27 9.1
SB_7200| Best HMM Match : Tubulin-binding (HMM E-Value=5.1) 27 9.1
>SB_45977| Best HMM Match : MBT (HMM E-Value=0)
Length = 1198
Score = 32.3 bits (70), Expect = 0.24
Identities = 19/93 (20%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Frame = -1
Query: 282 VTDNDVVCEETEAVASATTFSRASP--PEAKDLRTRLKMRISPSAEPTDAETLGTARTKL 109
++ VV ++T++ +S T R P P + D +++L A PT + ++ T +
Sbjct: 975 ISSRPVVVQQTKSPSSYPTVIRPKPSLPYSHDFKSKLSSPYHSEARPTSSSSVQTGEKTI 1034
Query: 108 SRVPT*LTRRKCRELKSSALTSVTRPEKLMMAD 10
S T ++ + + ++ ++ T P + D
Sbjct: 1035 SSHITGVSTAQITSMSTTTESTTTHPVRRTSRD 1067
>SB_7302| Best HMM Match : DUF910 (HMM E-Value=2.2)
Length = 288
Score = 30.7 bits (66), Expect = 0.74
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Frame = -1
Query: 288 SDVTDNDVVCEETEAVASATTFSRASPPEAKDLRTRLKMRISP--SAEPTDAETLGTART 115
SD TD+ + ASA F ASPP+ K LR R+ + +P S + +D++ L + T
Sbjct: 77 SDCTDSS---DAVSRPASAEPF--ASPPQPKSLRQRMLQKYNPENSVDDSDSDDLESFFT 131
Query: 114 K 112
K
Sbjct: 132 K 132
>SB_19364| Best HMM Match : zf-C5HC2 (HMM E-Value=5)
Length = 246
Score = 28.7 bits (61), Expect = 3.0
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = -1
Query: 342 SEEIDLEVRFDIANSYCSSDVTDNDVVCEETEAVASATTFSRAS 211
+++ID +V F C T + VVC+ TE + S TT R S
Sbjct: 39 AQDIDGKVYFAGEIIVCDYTETHSAVVCDYTETLRSCTTIRRHS 82
>SB_38797| Best HMM Match : Extensin_2 (HMM E-Value=2.3)
Length = 308
Score = 27.9 bits (59), Expect = 5.2
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = -1
Query: 270 DVVCEETEAVASATTFSRASPPEAKDLRTRLKMRISPSAEPTDAET 133
+VV E A T +P E K+L L + + EP +AET
Sbjct: 79 EVVAESAPPPAQTETEDTTTPEEVKELSNVLDEQDTKPEEPAEAET 124
>SB_31470| Best HMM Match : SAND (HMM E-Value=5e-37)
Length = 912
Score = 27.9 bits (59), Expect = 5.2
Identities = 23/96 (23%), Positives = 39/96 (40%), Gaps = 2/96 (2%)
Frame = -1
Query: 288 SDVTDNDVVCEETEAVASATTFSRASPPEAKDLRTRLKMRISPSAEPTDAETLGTARTKL 109
S + + D +C+ + S T S+ +A L ++ ++ + + L + L
Sbjct: 340 SKLMEKDALCDLDSLLQSVTRESKLMEKDALSYLESLLQSVTRESKLMEKDALSDLESLL 399
Query: 108 SRVP--T*LTRRKCRELKSSALTSVTRPEKLMMADA 7
V + L + S L SVTR KLM DA
Sbjct: 400 QSVTRESKLMEKDALSDLESLLQSVTRESKLMEKDA 435
Score = 27.1 bits (57), Expect = 9.1
Identities = 27/97 (27%), Positives = 43/97 (44%), Gaps = 3/97 (3%)
Frame = -1
Query: 288 SDVTDNDVVCEETEAVASATTFSRASPPEA-KDLRTRLKM--RISPSAEPTDAETLGTAR 118
S + + D +C+ + S T S+ +A DL + L+ R S E L +
Sbjct: 472 SKLMEKDALCDLESLLQSVTRESKLMEKDALSDLESLLQSVTRESKLMEKDALSDLESLL 531
Query: 117 TKLSRVPT*LTRRKCRELKSSALTSVTRPEKLMMADA 7
++R + + +L+S L SVTR KLM DA
Sbjct: 532 QSVTRESKLMEKDALSDLES-LLQSVTRESKLMEKDA 567
>SB_15610| Best HMM Match : DUF1174 (HMM E-Value=7.8)
Length = 200
Score = 27.9 bits (59), Expect = 5.2
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = -1
Query: 270 DVVCEETEAVASATTFSRASPPEAKDLRTRLKMRISPSAEPTDAET 133
+VV E A T +P E K+L L + + EP +AET
Sbjct: 79 EVVAESAPPPAQTETEDTTTPEEVKELSNVLDEQDTKPEEPAEAET 124
>SB_56858| Best HMM Match : AT_hook (HMM E-Value=3.7)
Length = 100
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/55 (27%), Positives = 22/55 (40%)
Frame = +3
Query: 321 PPNQSLRTRSWTSRQQLPREDPCLPDGLRSRGQPCSGVRRPTRHQQITVNYSNDT 485
PP + + T++ C+PD QP RRPTR + Y +T
Sbjct: 32 PPAEPVAETPPTTQANNDPVSSCMPDASSQAPQPLPEPRRPTRARTRPKRYEPET 86
>SB_52167| Best HMM Match : Extensin_2 (HMM E-Value=3.6)
Length = 287
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/55 (27%), Positives = 22/55 (40%)
Frame = +3
Query: 321 PPNQSLRTRSWTSRQQLPREDPCLPDGLRSRGQPCSGVRRPTRHQQITVNYSNDT 485
PP + + T++ C+PD QP RRPTR + Y +T
Sbjct: 219 PPAEPVAETPPTTQANNDPVSSCMPDASSQAPQPLPEPRRPTRARTRPKRYEPET 273
>SB_39727| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 259
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/55 (27%), Positives = 22/55 (40%)
Frame = +3
Query: 321 PPNQSLRTRSWTSRQQLPREDPCLPDGLRSRGQPCSGVRRPTRHQQITVNYSNDT 485
PP + + T++ C+PD QP RRPTR + Y +T
Sbjct: 191 PPAEPVAETPPTTQANNDPVSSCMPDASSQAPQPLPEPRRPTRARTRPKRYEPET 245
>SB_35595| Best HMM Match : AT_hook (HMM E-Value=3.7)
Length = 214
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/55 (27%), Positives = 22/55 (40%)
Frame = +3
Query: 321 PPNQSLRTRSWTSRQQLPREDPCLPDGLRSRGQPCSGVRRPTRHQQITVNYSNDT 485
PP + + T++ C+PD QP RRPTR + Y +T
Sbjct: 146 PPAEPVAETPPTTQANNDPVSSCMPDASSQAPQPLPEPRRPTRARTRPKRYEPET 200
>SB_34667| Best HMM Match : AT_hook (HMM E-Value=3.7)
Length = 240
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/55 (27%), Positives = 22/55 (40%)
Frame = +3
Query: 321 PPNQSLRTRSWTSRQQLPREDPCLPDGLRSRGQPCSGVRRPTRHQQITVNYSNDT 485
PP + + T++ C+PD QP RRPTR + Y +T
Sbjct: 172 PPAEPVAETPPTTQANNDPVSSCMPDASSQAPQPLPEPRRPTRARTRPKRYEPET 226
>SB_32994| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 662
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/55 (27%), Positives = 22/55 (40%)
Frame = +3
Query: 321 PPNQSLRTRSWTSRQQLPREDPCLPDGLRSRGQPCSGVRRPTRHQQITVNYSNDT 485
PP + + T++ C+PD QP RRPTR + Y +T
Sbjct: 594 PPAEPVAETPPTTQANNDPVSSCMPDASSQAPQPLPEPRRPTRARTRPKRYEPET 648
>SB_17624| Best HMM Match : rve (HMM E-Value=2.2e-11)
Length = 1213
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/55 (27%), Positives = 22/55 (40%)
Frame = +3
Query: 321 PPNQSLRTRSWTSRQQLPREDPCLPDGLRSRGQPCSGVRRPTRHQQITVNYSNDT 485
PP + + T++ C+PD QP RRPTR + Y +T
Sbjct: 1145 PPAEPVAETPPTTQANNDPVSSCMPDASSQAPQPLPEPRRPTRARTRPKRYEPET 1199
>SB_7962| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1269
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/55 (27%), Positives = 22/55 (40%)
Frame = +3
Query: 321 PPNQSLRTRSWTSRQQLPREDPCLPDGLRSRGQPCSGVRRPTRHQQITVNYSNDT 485
PP + + T++ C+PD QP RRPTR + Y +T
Sbjct: 1201 PPAEPVAETPPTTQANNDPVSSCMPDASSQAPQPLPEPRRPTRARTRPKRYEPET 1255
>SB_2435| Best HMM Match : WD40 (HMM E-Value=4.1e-10)
Length = 1272
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/55 (27%), Positives = 22/55 (40%)
Frame = +3
Query: 321 PPNQSLRTRSWTSRQQLPREDPCLPDGLRSRGQPCSGVRRPTRHQQITVNYSNDT 485
PP + + T++ C+PD QP RRPTR + Y +T
Sbjct: 1204 PPAEPVAETPPTTQANNDPVSSCMPDASSQAPQPLPEPRRPTRARTRPKRYEPET 1258
>SB_53291| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 675
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/55 (27%), Positives = 22/55 (40%)
Frame = +3
Query: 321 PPNQSLRTRSWTSRQQLPREDPCLPDGLRSRGQPCSGVRRPTRHQQITVNYSNDT 485
PP + + T++ C+PD QP RRPTR + Y +T
Sbjct: 607 PPAEPVAETPPTTQANNDPVSSCMPDASSQAPQPLPEPRRPTRARTRPKRYEPET 661
>SB_33158| Best HMM Match : rve (HMM E-Value=7.5e-05)
Length = 848
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/55 (27%), Positives = 22/55 (40%)
Frame = +3
Query: 321 PPNQSLRTRSWTSRQQLPREDPCLPDGLRSRGQPCSGVRRPTRHQQITVNYSNDT 485
PP + + T++ C+PD QP RRPTR + Y +T
Sbjct: 780 PPAEPVAETPPTTQANNDPVSSCMPDASSQAPQPLPEPRRPTRARTRPKRYEPET 834
>SB_769| Best HMM Match : Retrotrans_gag (HMM E-Value=0.32)
Length = 500
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/55 (27%), Positives = 22/55 (40%)
Frame = +3
Query: 321 PPNQSLRTRSWTSRQQLPREDPCLPDGLRSRGQPCSGVRRPTRHQQITVNYSNDT 485
PP + + T++ C+PD QP RRPTR + Y +T
Sbjct: 432 PPAEPVAETPPTTQANNDPVSSCMPDASSQAPQPLPEPRRPTRARTRPKRYEPET 486
>SB_34944| Best HMM Match : DUF1087 (HMM E-Value=6.9)
Length = 203
Score = 27.1 bits (57), Expect = 9.1
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = -2
Query: 506 IIYFRFTSIVRVIYSNLLMTSWATYSRTRL 417
++YFRF V +++N +T W R R+
Sbjct: 27 VVYFRFIFNVTRVFTNYKVTYWGLRQRKRI 56
>SB_12646| Best HMM Match : SSrecog (HMM E-Value=0)
Length = 783
Score = 27.1 bits (57), Expect = 9.1
Identities = 19/57 (33%), Positives = 24/57 (42%)
Frame = +2
Query: 29 SGRVTDVKADDFSSLHLRRVSYVGTRLNLVLAVPRVSASVGSAEGEIRIFSRVLRSF 199
+GRV DD S H RV+ G L +VL G E + S L+SF
Sbjct: 38 TGRVDQFSKDDIESAHWLRVA-CGQELKIVLKSGLQFRFDGFKESDFANLSEFLKSF 93
>SB_7200| Best HMM Match : Tubulin-binding (HMM E-Value=5.1)
Length = 294
Score = 27.1 bits (57), Expect = 9.1
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +3
Query: 339 RTRSWTSRQQLPREDPCLPDGLRSRGQPCSGV 434
RT+SWT + +++P +P L C GV
Sbjct: 223 RTKSWTFKSSQAKDNPRVPGHLDQTKGNCGGV 254
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,668,616
Number of Sequences: 59808
Number of extensions: 244768
Number of successful extensions: 762
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 697
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 760
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1136110413
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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