Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0529
         (513 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK092754-1|BAC03965.1|  615|Homo sapiens protein ( Homo sapiens ...    31   3.1  
AK092650-1|BAC03936.1|  577|Homo sapiens protein ( Homo sapiens ...    30   4.1  

>AK092754-1|BAC03965.1|  615|Homo sapiens protein ( Homo sapiens
           cDNA FLJ35435 fis, clone SMINT2002620. ).
          Length = 615

 Score = 30.7 bits (66), Expect = 3.1
 Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
 Frame = -1

Query: 246 AVASATTFSRASPPEAKDLRTRLKMRISP---SAEPTDAETLGTARTKLSRVP 97
           A    ++F R S     DLRT    R+     S+  TD++ LG+ RTK  R P
Sbjct: 259 AFLKKSSFKRKSTSNLADLRTAHDARVPQRTLSSSSTDSQKLGSGRTKRWRSP 311


>AK092650-1|BAC03936.1|  577|Homo sapiens protein ( Homo sapiens
           cDNA FLJ35331 fis, clone PROST2014659. ).
          Length = 577

 Score = 30.3 bits (65), Expect = 4.1
 Identities = 21/59 (35%), Positives = 28/59 (47%)
 Frame = -1

Query: 306 ANSYCSSDVTDNDVVCEETEAVASATTFSRASPPEAKDLRTRLKMRISPSAEPTDAETL 130
           A SY SS       +C+    V+  T  S +SPP+A  LR  L +    S+ P DA  L
Sbjct: 112 ARSYSSSPPDPTPPLCQILLLVS--TRCSSSSPPDAPRLREMLLLSARCSSSPPDAPPL 168


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,076,244
Number of Sequences: 237096
Number of extensions: 1080501
Number of successful extensions: 3042
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2952
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3042
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4820001670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)