Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0529
(513 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF099915-2|AAC68772.1| 262|Caenorhabditis elegans Hypothetical ... 32 0.21
AF068721-9|AAC19265.1| 570|Caenorhabditis elegans Hypothetical ... 31 0.37
AF099918-1|AAK29840.2| 820|Caenorhabditis elegans Hypothetical ... 30 1.1
AL034393-11|CAA22324.2| 2417|Caenorhabditis elegans Hypothetical... 29 1.5
AJ250261-1|CAB59919.1| 2417|Caenorhabditis elegans hypothetical ... 29 1.5
U89245-1|AAB49459.1| 612|Caenorhabditis elegans transcription f... 28 4.5
U00048-10|AAB53823.2| 852|Caenorhabditis elegans Related to yea... 28 4.5
AF003141-10|AAK21487.1| 612|Caenorhabditis elegans Uncoordinate... 28 4.5
AF001272-1|AAB84235.1| 612|Caenorhabditis elegans enhancer of s... 28 4.5
AF001271-1|AAB84234.1| 612|Caenorhabditis elegans enhancer of s... 28 4.5
Z82275-3|CAL44962.1| 478|Caenorhabditis elegans Hypothetical pr... 27 7.9
Z82265-8|CAB05169.2| 478|Caenorhabditis elegans Hypothetical pr... 27 7.9
U38937-1|AAA93079.1| 441|Caenorhabditis elegans LIN-1 protein. 27 7.9
U38935-1|AAB60254.1| 441|Caenorhabditis elegans LIN-1 protein. 27 7.9
AL033508-1|CAA22058.2| 821|Caenorhabditis elegans Hypothetical ... 27 7.9
AF067606-1|AAC17530.3| 441|Caenorhabditis elegans Abnormal cell... 27 7.9
AC084159-10|AAK39362.1| 310|Caenorhabditis elegans Hypothetical... 27 7.9
>AF099915-2|AAC68772.1| 262|Caenorhabditis elegans Hypothetical
protein E02H9.7 protein.
Length = 262
Score = 32.3 bits (70), Expect = 0.21
Identities = 21/89 (23%), Positives = 37/89 (41%)
Frame = -1
Query: 300 SYCSSDVTDNDVVCEETEAVASATTFSRASPPEAKDLRTRLKMRISPSAEPTDAETLGTA 121
S C D +ND +C +A + T + + PE T + + S PT + +A
Sbjct: 141 SKCPKDYYNNDGLCSPVKATTTPTPDTAETSPEVLASSTSTVVASTTSETPTTPAPVTSA 200
Query: 120 RTKLSRVPT*LTRRKCRELKSSALTSVTR 34
+ +LS T + +K + S +R
Sbjct: 201 KEELSSTSTVASSTINTNVKETTTPSASR 229
>AF068721-9|AAC19265.1| 570|Caenorhabditis elegans Hypothetical
protein ZK1055.7 protein.
Length = 570
Score = 31.5 bits (68), Expect = 0.37
Identities = 17/56 (30%), Positives = 30/56 (53%)
Frame = -1
Query: 291 SSDVTDNDVVCEETEAVASATTFSRASPPEAKDLRTRLKMRISPSAEPTDAETLGT 124
S++VT+ + + T + + P + D + R+K+ +SP+A P DAE GT
Sbjct: 463 SANVTEQTISIKNTRNEQPVLLTVKHAIPRSTDEKIRVKL-VSPAATPYDAEKAGT 517
>AF099918-1|AAK29840.2| 820|Caenorhabditis elegans Hypothetical
protein H05C05.1a protein.
Length = 820
Score = 29.9 bits (64), Expect = 1.1
Identities = 14/56 (25%), Positives = 27/56 (48%)
Frame = -1
Query: 264 VCEETEAVASATTFSRASPPEAKDLRTRLKMRISPSAEPTDAETLGTARTKLSRVP 97
+ E+ E +S + ++ EAK + K + PSA +D + T T +++ P
Sbjct: 688 IAEKPEGSSSGSATEKSKEIEAKSKKDDTKKPLEPSAASSDPSSSSTTTTTITKEP 743
>AL034393-11|CAA22324.2| 2417|Caenorhabditis elegans Hypothetical
protein Y18D10A.13 protein.
Length = 2417
Score = 29.5 bits (63), Expect = 1.5
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = -1
Query: 303 NSYCSSDVTDNDVVCEETEAVASATTFSRASPPEAKDL 190
NS CS+ D+DV + A A+A S A PP+ +DL
Sbjct: 443 NSVCSTSNKDDDVTSVTSSAAANA---SSAPPPDEEDL 477
>AJ250261-1|CAB59919.1| 2417|Caenorhabditis elegans hypothetical
protein protein.
Length = 2417
Score = 29.5 bits (63), Expect = 1.5
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = -1
Query: 303 NSYCSSDVTDNDVVCEETEAVASATTFSRASPPEAKDL 190
NS CS+ D+DV + A A+A S A PP+ +DL
Sbjct: 443 NSVCSTSNKDDDVTSVTSSAAANA---SSAPPPDEEDL 477
>U89245-1|AAB49459.1| 612|Caenorhabditis elegans transcription
factor UNC-37 protein.
Length = 612
Score = 27.9 bits (59), Expect = 4.5
Identities = 19/77 (24%), Positives = 34/77 (44%)
Frame = -3
Query: 256 GDGSGSLSNDVLKGKSSGSERPQDAAENADFSFSGTD*C*NSGNSQD*VESGADVTDTTQ 77
GDG+G S + K + E P D D + ++G + + ++G D T++
Sbjct: 151 GDGAGGSSGGASEAKKAKLEDPDDGELEIDVTNDDHPSTASNGGAAN--KNGRDSTNSVA 208
Query: 76 MQGAEVISLDVSHAARE 26
GA S+ + AR+
Sbjct: 209 SSGASTPSIASNSRARQ 225
>U00048-10|AAB53823.2| 852|Caenorhabditis elegans Related to yeast
vacuolar proteinsorting factor protein 16 protein.
Length = 852
Score = 27.9 bits (59), Expect = 4.5
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = -1
Query: 321 VRFDIANSYCSSDVTDNDVV-CEETEAVASATTFSRASPPEAKDLRTRLKMRISPSAEPT 145
V D++ +C+ ++TD+D+ C V ++ F + SP + + + R P E
Sbjct: 252 VSIDLSTCFCTVEITDHDIAKCINFGWVGNSAVFVQMSP--SLIVFVNVSARRKPGDEVQ 309
Query: 144 DAETLGTARTKLSRVP 97
E + TA K+S P
Sbjct: 310 IYEKM-TANAKISIEP 324
>AF003141-10|AAK21487.1| 612|Caenorhabditis elegans Uncoordinated
protein 37 protein.
Length = 612
Score = 27.9 bits (59), Expect = 4.5
Identities = 19/77 (24%), Positives = 34/77 (44%)
Frame = -3
Query: 256 GDGSGSLSNDVLKGKSSGSERPQDAAENADFSFSGTD*C*NSGNSQD*VESGADVTDTTQ 77
GDG+G S + K + E P D D + ++G + + ++G D T++
Sbjct: 151 GDGAGGSSGGASEAKKAKLEDPDDGELEIDVTNDDHPSTASNGGAAN--KNGRDSTNSVA 208
Query: 76 MQGAEVISLDVSHAARE 26
GA S+ + AR+
Sbjct: 209 SSGASTPSIASNSRARQ 225
>AF001272-1|AAB84235.1| 612|Caenorhabditis elegans enhancer of
split groucho protein.
Length = 612
Score = 27.9 bits (59), Expect = 4.5
Identities = 19/77 (24%), Positives = 34/77 (44%)
Frame = -3
Query: 256 GDGSGSLSNDVLKGKSSGSERPQDAAENADFSFSGTD*C*NSGNSQD*VESGADVTDTTQ 77
GDG+G S + K + E P D D + ++G + + ++G D T++
Sbjct: 151 GDGAGGSSGGASEAKKAKLEDPDDGELEIDVTNDDHPSTASNGGAAN--KNGRDSTNSVA 208
Query: 76 MQGAEVISLDVSHAARE 26
GA S+ + AR+
Sbjct: 209 SSGASTPSIASNSRARQ 225
>AF001271-1|AAB84234.1| 612|Caenorhabditis elegans enhancer of
split groucho protein.
Length = 612
Score = 27.9 bits (59), Expect = 4.5
Identities = 19/77 (24%), Positives = 34/77 (44%)
Frame = -3
Query: 256 GDGSGSLSNDVLKGKSSGSERPQDAAENADFSFSGTD*C*NSGNSQD*VESGADVTDTTQ 77
GDG+G S + K + E P D D + ++G + + ++G D T++
Sbjct: 151 GDGAGGSSGGASEAKKAKLEDPDDGELEIDVTNDDHPSTASNGGAAN--KNGRDSTNSVA 208
Query: 76 MQGAEVISLDVSHAARE 26
GA S+ + AR+
Sbjct: 209 SSGASTPSIASNSRARQ 225
>Z82275-3|CAL44962.1| 478|Caenorhabditis elegans Hypothetical
protein F02H6.2 protein.
Length = 478
Score = 27.1 bits (57), Expect = 7.9
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = -1
Query: 396 QVDRDLL*EVVDGWSNFASEEIDLEVRFDIANSYCSSDVTDNDVVCEETEAVA 238
Q +RD EV+D F EE+D EV + ++ TD++V + E V+
Sbjct: 28 QAERDGWNEVIDNVGEFEDEEVDEEVDEEEDHAEDEERDTDDEVEGFDKEIVS 80
>Z82265-8|CAB05169.2| 478|Caenorhabditis elegans Hypothetical
protein F02H6.2 protein.
Length = 478
Score = 27.1 bits (57), Expect = 7.9
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = -1
Query: 396 QVDRDLL*EVVDGWSNFASEEIDLEVRFDIANSYCSSDVTDNDVVCEETEAVA 238
Q +RD EV+D F EE+D EV + ++ TD++V + E V+
Sbjct: 28 QAERDGWNEVIDNVGEFEDEEVDEEVDEEEDHAEDEERDTDDEVEGFDKEIVS 80
>U38937-1|AAA93079.1| 441|Caenorhabditis elegans LIN-1 protein.
Length = 441
Score = 27.1 bits (57), Expect = 7.9
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = -1
Query: 312 DIANSYCSSDVTDNDVVCEETEAVASATTFSRASPPEAKDLRTRLKMRISPS 157
D ++ S + D VC + +VAS+ T S +SP + + R K +SPS
Sbjct: 213 DSPTTHSVSTPSPTDSVCSPSSSVASSATPSTSSPVD--ESRQCRKRSLSPS 262
>U38935-1|AAB60254.1| 441|Caenorhabditis elegans LIN-1 protein.
Length = 441
Score = 27.1 bits (57), Expect = 7.9
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = -1
Query: 312 DIANSYCSSDVTDNDVVCEETEAVASATTFSRASPPEAKDLRTRLKMRISPS 157
D ++ S + D VC + +VAS+ T S +SP + + R K +SPS
Sbjct: 213 DSPTTHSVSTPSPTDSVCSPSSSVASSATPSTSSPVD--ESRQCRKRSLSPS 262
>AL033508-1|CAA22058.2| 821|Caenorhabditis elegans Hypothetical
protein Y106G6G.2 protein.
Length = 821
Score = 27.1 bits (57), Expect = 7.9
Identities = 23/63 (36%), Positives = 30/63 (47%), Gaps = 5/63 (7%)
Frame = -1
Query: 309 IANSY---CSSDVTDNDVVCEETEAVASATTFSRA--SPPEAKDLRTRLKMRISPSAEPT 145
I NS+ CS V+D V E+TE V +T S A P AK + K R +P A
Sbjct: 424 IVNSFSLKCSERVSDICTVDEDTENVFDQSTNSSAPEDPMAAKLRKLEQKFRNAPIATRR 483
Query: 144 DAE 136
+E
Sbjct: 484 SSE 486
>AF067606-1|AAC17530.3| 441|Caenorhabditis elegans Abnormal cell
lineage protein 1 protein.
Length = 441
Score = 27.1 bits (57), Expect = 7.9
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = -1
Query: 312 DIANSYCSSDVTDNDVVCEETEAVASATTFSRASPPEAKDLRTRLKMRISPS 157
D ++ S + D VC + +VAS+ T S +SP + + R K +SPS
Sbjct: 213 DSPTTHSVSTPSPTDSVCSPSSSVASSATPSTSSPVD--ESRQCRKRSLSPS 262
>AC084159-10|AAK39362.1| 310|Caenorhabditis elegans Hypothetical
protein Y73B3A.5 protein.
Length = 310
Score = 27.1 bits (57), Expect = 7.9
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = -1
Query: 312 DIANSYCSSDVTDNDVVCEETEAVASATTFSRASP-PEAKDLRTR-LKMRISPS 157
D ++ S + D VC + +VAS+ T S +SP E++ R R L +PS
Sbjct: 118 DSPTTHSVSTPSPTDSVCSPSSSVASSATPSTSSPVDESRQCRKRSLSSSTTPS 171
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,980,789
Number of Sequences: 27780
Number of extensions: 179417
Number of successful extensions: 545
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 532
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 545
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 985905834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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