Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0528
         (670 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q23Q29 Cluster: Putative uncharacterized protein; n=1; ...    36   0.88 
UniRef50_A6WYA3 Cluster: Putative uncharacterized protein; n=1; ...    33   8.2  

>UniRef50_Q23Q29 Cluster: Putative uncharacterized protein; n=1;
            Tetrahymena thermophila SB210|Rep: Putative
            uncharacterized protein - Tetrahymena thermophila SB210
          Length = 2761

 Score = 35.9 bits (79), Expect = 0.88
 Identities = 16/42 (38%), Positives = 22/42 (52%)
 Frame = +3

Query: 357  SFIEAGHTLYSAIVLTKVQQVSFWCCSSSGVSIHILSTALFE 482
            SF+  G TLY  + L  +QQ+ F+C       I  LST  F+
Sbjct: 982  SFVAPGGTLYGMVYLPDIQQIGFYCSDIRSGQIIFLSTTNFQ 1023


>UniRef50_A6WYA3 Cluster: Putative uncharacterized protein; n=1;
           Ochrobactrum anthropi ATCC 49188|Rep: Putative
           uncharacterized protein - Ochrobactrum anthropi (strain
           ATCC 49188 / DSM 6882 / NCTC 12168)
          Length = 93

 Score = 32.7 bits (71), Expect = 8.2
 Identities = 12/53 (22%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
 Frame = +1

Query: 139 FAIGID*YLFIIFLFEFMLDIRYALF-FFFWKRYLEAYSIF*CLNNVVWFQLY 294
           F +G D Y+ I  ++   + I + L+  F+W+ ++    +F CL+ +++  ++
Sbjct: 41  FGVGDDGYIVIFSIYTAPVAIVFGLWGLFYWRSFVAVIGLFLCLSPLIYLSIF 93


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 585,240,281
Number of Sequences: 1657284
Number of extensions: 11124211
Number of successful extensions: 24405
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 23298
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24299
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 51239674196
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)