Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0528
         (670 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase ...    25   2.9  
AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    24   5.0  
AF395079-1|AAK97461.1|  371|Anopheles gambiae basic helix-loop-h...    23   8.7  

>AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase
           protein.
          Length = 849

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +2

Query: 29  PILFIYFNVIIDLNSYK*KNQVTFVGIMMIY 121
           P+  +  N II LNSYK K  + F  + MI+
Sbjct: 517 PVWQLASNKIIFLNSYKMKLSIIFGVVHMIF 547


>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +2

Query: 29  PILFIYFNVIIDLNSYK*KNQVTFVGIMMIY 121
           P+  +  N II LNS+K K  + F  + MI+
Sbjct: 506 PLWMLATNKIIFLNSFKMKLSIIFGVVHMIF 536


>AF395079-1|AAK97461.1|  371|Anopheles gambiae basic
           helix-loop-helix transcriptionfactor ASH protein.
          Length = 371

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
 Frame = +2

Query: 539 ELSRCLRILLDETTNRLPSLYTTPQLFSRSLNAPL---*ACSAHKGA 670
           E  R L+ +LDE    LPS     QL S S +  L     CSA  G+
Sbjct: 158 EYIRSLQRMLDENGGELPSNKQQQQLTSASSSNQLSNSSLCSASSGS 204


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 627,190
Number of Sequences: 2352
Number of extensions: 13726
Number of successful extensions: 40
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66904800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)