Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0528
         (670 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g80860.2 68414.m09486 expressed protein                             28   6.5  
At1g80860.1 68414.m09487 expressed protein                             28   6.5  
At1g25375.1 68414.m03149 metallo-beta-lactamase family protein         28   6.5  
At4g08400.1 68417.m01388 proline-rich extensin-like family prote...    27   8.5  
At1g35350.1 68414.m04383 EXS family protein / ERD1/XPR1/SYG1 fam...    27   8.5  
At1g26730.1 68414.m03255 EXS family protein / ERD1/XPR1/SYG1 fam...    27   8.5  

>At1g80860.2 68414.m09486 expressed protein
          Length = 164

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 11/31 (35%), Positives = 20/31 (64%)
 Frame = +3

Query: 279 VVSIVQCLSYFKFRNI*LSGYSYLFFSFIEA 371
           ++S++ CLS+  F+ I L    Y+F  F+E+
Sbjct: 122 IMSLLACLSWVPFQYILLWSLGYVFMMFLES 152


>At1g80860.1 68414.m09487 expressed protein
          Length = 164

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 11/31 (35%), Positives = 20/31 (64%)
 Frame = +3

Query: 279 VVSIVQCLSYFKFRNI*LSGYSYLFFSFIEA 371
           ++S++ CLS+  F+ I L    Y+F  F+E+
Sbjct: 122 IMSLLACLSWVPFQYILLWSLGYVFMMFLES 152


>At1g25375.1 68414.m03149 metallo-beta-lactamase family protein
          Length = 524

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
 Frame = +3

Query: 363 IEAGHTLYSAI--VLTKVQQVSFWCCSSSGVSIHILSTALFENKL 491
           ++   TLY  +  V + V +  FW  +SS V +HI   A+ ENKL
Sbjct: 418 VDGAQTLYDIVAKVYSSVDR-KFWWAASSNVRLHIEKLAV-ENKL 460


>At4g08400.1 68417.m01388 proline-rich extensin-like family protein
           contains proline-rich extensin domains,
           INTERPRO:IPR002965
          Length = 513

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 16/42 (38%), Positives = 22/42 (52%)
 Frame = +1

Query: 472 PSLRINYFLSPPFFTYLKITIARAQSVSKNPSRRNYKSPPKP 597
           PS ++NY   PP + Y   +       S +P + NYKSPP P
Sbjct: 423 PSPKVNYKTPPPPYVY---SSPPPPYYSPSP-KVNYKSPPPP 460


>At1g35350.1 68414.m04383 EXS family protein / ERD1/XPR1/SYG1 family
           protein similar to  PHO1 protein [Arabidopsis thaliana]
           GI:20069032; contains Pfam profiles PF03105: SPX domain,
           PF03124: EXS family
          Length = 747

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +1

Query: 163 LFIIFLFEFMLDIRYALFFFFWKRYLEAY 249
           L+ +F F  +  I YA   +FWKRY   Y
Sbjct: 389 LYSLFAFVVLHMIMYASNIYFWKRYRVNY 417


>At1g26730.1 68414.m03255 EXS family protein / ERD1/XPR1/SYG1 family
           protein similar to  PHO1 protein [Arabidopsis thaliana]
           GI:20069032; contains Pfam profiles PF03105: SPX domain,
           PF03124: EXS family
          Length = 750

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +1

Query: 163 LFIIFLFEFMLDIRYALFFFFWKRYLEAY 249
           L+ +F F  +  I YA   +FWKRY   Y
Sbjct: 392 LYSLFAFVVLHMIMYASNIYFWKRYRVNY 420


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,717,544
Number of Sequences: 28952
Number of extensions: 248929
Number of successful extensions: 520
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 486
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 519
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1412971776
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)