Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0527
         (446 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    26   0.14 
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    26   0.14 
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    25   0.43 
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    22   3.0  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   7.0  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   7.0  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   7.0  

>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 26.2 bits (55), Expect = 0.14
 Identities = 14/43 (32%), Positives = 26/43 (60%)
 Frame = +1

Query: 193 WSSGNTFFHMTMGNFLRGTKICVKLRLATKWMILFHHTLLSSV 321
           +SS +TFF +   + LR   + V++ L    +IL  HT+L+++
Sbjct: 38  FSSVSTFFKIPFYSTLRPINLLVQIILDVILLILNVHTILTTI 80


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 26.2 bits (55), Expect = 0.14
 Identities = 14/43 (32%), Positives = 26/43 (60%)
 Frame = +1

Query: 193 WSSGNTFFHMTMGNFLRGTKICVKLRLATKWMILFHHTLLSSV 321
           +SS +TFF +   + LR   + V++ L    +IL  HT+L+++
Sbjct: 38  FSSVSTFFKIPFYSTLRPINLLVQIILDVILLILNVHTILTTI 80


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 24.6 bits (51), Expect = 0.43
 Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
 Frame = +1

Query: 157 VLITHPFSQLS-NWSSGNTFFHMTMGNFLRGTKICVKLRLATKWMILFHHTLLSSV 321
           V+I    +Q S N +  +TFF +   + LR   + V++ L    +IL  HT+L+++
Sbjct: 345 VMIQFEMTQNSTNINFVSTFFKIPFYSTLRPINLLVQIILDVILLILNVHTILTTI 400


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = +2

Query: 89  STKSEFILAAFFHPILAAFFAGMC*SRTPFHNY 187
           ST   + L   F P   +   G+C   TP+H +
Sbjct: 458 STVGHWYLDCGFGPWKPSMHGGVCDPYTPWHTF 490


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 20.6 bits (41), Expect = 7.0
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +3

Query: 117 PSFTLFWLPSLQ 152
           PSF LF+ PS Q
Sbjct: 101 PSFDLFYYPSRQ 112


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 7.0
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +2

Query: 98   SEFILAAFFHP 130
            +EFI+AA  HP
Sbjct: 986  AEFIIAALLHP 996


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 7.0
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +2

Query: 98   SEFILAAFFHP 130
            +EFI+AA  HP
Sbjct: 986  AEFIIAALLHP 996


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,787
Number of Sequences: 336
Number of extensions: 2150
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10090848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)