Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0527
         (446 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC035615-1|AAH35615.1|  662|Homo sapiens MYO7B protein protein.        71   1e-12
U39226-1|AAB03679.1| 2215|Homo sapiens myosin VIIA protein.            65   1e-10
U55208-1|AAC50927.1| 2175|Homo sapiens myosin VIIa protein.            64   2e-10

>BC035615-1|AAH35615.1|  662|Homo sapiens MYO7B protein protein.
          Length = 662

 Score = 71.3 bits (167), Expect = 1e-12
 Identities = 42/111 (37%), Positives = 65/111 (58%)
 Frame = +3

Query: 3   FFEVKQTSDPAYPEMVIVGINKNGVSLVHPQSRNSY*LPSFTLFWLPSLQGCVDHAPLFT 182
           FFEVKQTS+P+YP+++++ IN++GV L+HP++++      FT     S      H  L +
Sbjct: 557 FFEVKQTSEPSYPDVILIAINRHGVLLIHPKTKDLLTTYPFTKISSWSSGSTYFHMALGS 616

Query: 183 II*LVVWKHIFSHDNGKFLKRN*DLCETSLGYKMDDLISSYIAVLRASLNQ 335
           +              G  L     LCETSLGYKMDDL++SY+  L +++N+
Sbjct: 617 L------------GRGSRL-----LCETSLGYKMDDLLTSYVQQLLSAMNK 650



 Score = 52.0 bits (119), Expect = 9e-07
 Identities = 19/44 (43%), Positives = 34/44 (77%)
 Frame = +1

Query: 151 RDVLITHPFSQLSNWSSGNTFFHMTMGNFLRGTKICVKLRLATK 282
           +D+L T+PF+++S+WSSG+T+FHM +G+  RG+++  +  L  K
Sbjct: 589 KDLLTTYPFTKISSWSSGSTYFHMALGSLGRGSRLLCETSLGYK 632


>U39226-1|AAB03679.1| 2215|Homo sapiens myosin VIIA protein.
          Length = 2215

 Score = 64.9 bits (151), Expect = 1e-10
 Identities = 39/111 (35%), Positives = 63/111 (56%)
 Frame = +3

Query: 3    FFEVKQTSDPAYPEMVIVGINKNGVSLVHPQSRNSY*LPSFTLFWLPSLQGCVDHAPLFT 182
            FFEVKQT++P +PE++++ INK GVSL+ P++++      FT     S      H  +  
Sbjct: 2114 FFEVKQTTEPNFPEILLIAINKYGVSLIDPKTKDILTTHPFTKISNWSSGNTYFHITI-- 2171

Query: 183  II*LVVWKHIFSHDNGKFLKRN*DLCETSLGYKMDDLISSYIAVLRASLNQ 335
                           G  ++ +  LCETSLGYKMDDL++SYI+ +  ++++
Sbjct: 2172 ---------------GNLVRGSKLLCETSLGYKMDDLLTSYISQMLTAMSK 2207



 Score = 64.5 bits (150), Expect = 2e-10
 Identities = 24/44 (54%), Positives = 36/44 (81%)
 Frame = +1

Query: 151  RDVLITHPFSQLSNWSSGNTFFHMTMGNFLRGTKICVKLRLATK 282
            +D+L THPF+++SNWSSGNT+FH+T+GN +RG+K+  +  L  K
Sbjct: 2146 KDILTTHPFTKISNWSSGNTYFHITIGNLVRGSKLLCETSLGYK 2189


>U55208-1|AAC50927.1| 2175|Homo sapiens myosin VIIa protein.
          Length = 2175

 Score = 64.5 bits (150), Expect = 2e-10
 Identities = 24/44 (54%), Positives = 36/44 (81%)
 Frame = +1

Query: 151  RDVLITHPFSQLSNWSSGNTFFHMTMGNFLRGTKICVKLRLATK 282
            +D+L THPF+++SNWSSGNT+FH+T+GN +RG+K+  +  L  K
Sbjct: 2106 KDILTTHPFTKISNWSSGNTYFHITIGNLVRGSKLLCETSLGYK 2149



 Score = 56.0 bits (129), Expect = 5e-08
 Identities = 38/111 (34%), Positives = 61/111 (54%)
 Frame = +3

Query: 3    FFEVKQTSDPAYPEMVIVGINKNGVSLVHPQSRNSY*LPSFTLFWLPSLQGCVDHAPLFT 182
            FFE  QT++P +PE++++ INK GVSL+ P++++      FT     S      H  +  
Sbjct: 2076 FFE--QTTEPNFPEILLIAINKYGVSLIDPKTKDILTTHPFTKISNWSSGNTYFHITIGN 2133

Query: 183  II*LVVWKHIFSHDNGKFLKRN*DLCETSLGYKMDDLISSYIAVLRASLNQ 335
            ++             G  L     LCETSLGYKMDDL++SYI+ +  ++++
Sbjct: 2134 LV------------RGSKL-----LCETSLGYKMDDLLTSYISQMLTAMSK 2167


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,552,898
Number of Sequences: 237096
Number of extensions: 1204787
Number of successful extensions: 1532
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1497
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1532
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3644351872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)