Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0525
         (799 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   4.9  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    22   6.5  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    22   6.5  

>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = -3

Query: 296 NCSSCSCTIFYNSSEINNIREGGRSQNLILFIRGN 192
           +C  CS    Y  S   ++R  G + N++L   GN
Sbjct: 288 SCRDCSYATKYCHSLKIHLRRYGHTPNVVLDEEGN 322


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = +2

Query: 476 RDYSIFIIIITPVLAGAITILL 541
           + YS+FI+ +T +L   I +L+
Sbjct: 173 KTYSLFIVFMTVILPYFINLLM 194


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = +2

Query: 476 RDYSIFIIIITPVLAGAITILL 541
           + YS+FI+ +T +L   I +L+
Sbjct: 173 KTYSLFIVFMTVILPYFINLLM 194


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,241
Number of Sequences: 336
Number of extensions: 2929
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21687721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)