Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0524
         (527 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide recepto...    27   0.29 
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    27   0.39 
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    25   1.2  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    25   1.2  
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    25   1.2  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    23   8.4  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    23   8.4  

>AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide receptor
           protein.
          Length = 493

 Score = 27.5 bits (58), Expect = 0.29
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = -3

Query: 165 MGSNSSMMAGPTAIGTKSSMMGAGPATPGLTRPLVG 58
           +G+ SS   G   +G  S + G GP++PG    LVG
Sbjct: 15  LGNGSSSSGGGVGLG--SGIGGTGPSSPGEESALVG 48


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 27.1 bits (57), Expect = 0.39
 Identities = 28/129 (21%), Positives = 50/129 (38%), Gaps = 6/129 (4%)
 Frame = -3

Query: 519 WESRDHWLGSNGSNV---SNLDRLGDGAIDNNHGLSNDFGFVNDNHGLRDNGIDTGSGDN 349
           WES     G   +N    SN  + G        G    F     N G   N  + G G++
Sbjct: 24  WESNSDLYGPLHANYGPGSNNGQEGLKGPGGARGELKQFDLPLGNTGNSGNNNNNGVGNH 83

Query: 348 RGRASLVDV---QNDLHERSAVSNGGKRRVVYDSGPTEIGTYSSTMAGPTEIGSNSLTMA 178
           + + S V+    + + +  +  +NG       +SG +     +S++   +  GS + T  
Sbjct: 84  QQQPSPVNEGTGKTNNNNNNNNNNGSNTGATVNSGSSNAALSNSSVLNGSNSGSATTTTT 143

Query: 177 GPTEMGSNS 151
            PT  G+ +
Sbjct: 144 TPTNPGNGN 152


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 18/72 (25%), Positives = 29/72 (40%), Gaps = 3/72 (4%)
 Frame = -2

Query: 226 DDGRP-NGDRFEFVDNGRSDG--NGLELIYDGRSDSDRYKVVDDGSRSGNAGTYQALSRA 56
           D+GR  +  +++  +N   D   NG +      +  D Y+  D+G   G    Y    R 
Sbjct: 11  DEGRSFDQPKYDATENSVQDNDTNGFDNYQSNNAFGDEYQSNDNGGYGGGDDGYGGGGRG 70

Query: 55  GDSNGHHGSEGQ 20
           G   G  G  G+
Sbjct: 71  G-RGGRGGGRGR 81


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 6/42 (14%)
 Frame = +3

Query: 264 RQPSSCPRC*----QHSSRANHFE-HQPG*-LCPYCPRTRCR 371
           R+P +  RC     + ++R +HF  H P   LCPYCP +  R
Sbjct: 521 REPGTAWRCRSCGKEVTNRWHHFHSHTPQRSLCPYCPASYSR 562


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 6/42 (14%)
 Frame = +3

Query: 264 RQPSSCPRC*----QHSSRANHFE-HQPG*-LCPYCPRTRCR 371
           R+P +  RC     + ++R +HF  H P   LCPYCP +  R
Sbjct: 497 REPGTAWRCRSCGKEVTNRWHHFHSHTPQRSLCPYCPASYSR 538


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1977

 Score = 22.6 bits (46), Expect = 8.4
 Identities = 13/47 (27%), Positives = 21/47 (44%)
 Frame = -2

Query: 181  GRSDGNGLELIYDGRSDSDRYKVVDDGSRSGNAGTYQALSRAGDSNG 41
            G SD + L L+    S++      + G       +  A ++ GDSNG
Sbjct: 1119 GNSDSSQLSLVNGKGSEATTAPSDNAGGAEVTGDSCAAKAQTGDSNG 1165


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1978

 Score = 22.6 bits (46), Expect = 8.4
 Identities = 13/47 (27%), Positives = 21/47 (44%)
 Frame = -2

Query: 181  GRSDGNGLELIYDGRSDSDRYKVVDDGSRSGNAGTYQALSRAGDSNG 41
            G SD + L L+    S++      + G       +  A ++ GDSNG
Sbjct: 1117 GNSDSSQLSLVNGKGSEATTAPSDNAGGAEVTGDSCAAKAQTGDSNG 1163


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 454,653
Number of Sequences: 2352
Number of extensions: 10352
Number of successful extensions: 37
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 48628785
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)