Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0523
         (690 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    23   3.1  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        22   5.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.5  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    21   9.5  

>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -1

Query: 321 PRYGETIEVQTKLLHDFHVP 262
           P   E ++V   + +DFH+P
Sbjct: 190 PGMSENVDVINLMTYDFHIP 209


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = -2

Query: 578 GLIYRDPKFHPISKILEQNLSVVSNQSTIIG 486
           G+ Y+D   + +S +  Q+    +N  TI+G
Sbjct: 371 GINYKDTNDNNVSAVTTQHQGYPTNTVTILG 401


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -2

Query: 182  HPISTNSFHPHPTLLLPDK 126
            HP ++++  P  T ++PDK
Sbjct: 2285 HPDASSTMAPSTTPMVPDK 2303


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -1

Query: 504 PIYDHRVGPAPQILEALGQIPMV 436
           P++DHR   A Q   A  Q+P +
Sbjct: 302 PLHDHRPALAQQRRVAAVQVPQL 324


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,381
Number of Sequences: 336
Number of extensions: 4324
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18114270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)