Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0523
         (690 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF099915-3|AAC68766.1|  475|Caenorhabditis elegans Hypothetical ...    87   1e-17
U41557-9|AAA83309.1|  479|Caenorhabditis elegans Hypothetical pr...    84   1e-16
U12966-1|AAA20615.3|  510|Caenorhabditis elegans Aldehyde dehydr...    31   1.0  
U40059-1|AAA81138.3|  867|Caenorhabditis elegans Hypothetical pr...    28   5.5  
U88181-1|AAB42305.1|  149|Caenorhabditis elegans Hypothetical pr...    28   7.2  
U61947-2|AAB03135.1|  498|Caenorhabditis elegans Hypothetical pr...    28   7.2  
AL032648-5|CAA21698.1|  343|Caenorhabditis elegans Hypothetical ...    27   9.6  
AC006742-7|ABB51176.1| 1434|Caenorhabditis elegans Ferm domain (...    27   9.6  
AC006742-1|AAF60499.2| 1393|Caenorhabditis elegans Hypothetical ...    27   9.6  

>AF099915-3|AAC68766.1|  475|Caenorhabditis elegans Hypothetical
           protein E02H9.5 protein.
          Length = 475

 Score = 86.6 bits (205), Expect = 1e-17
 Identities = 39/92 (42%), Positives = 57/92 (61%), Gaps = 1/92 (1%)
 Frame = +1

Query: 256 YKRDVEIMKELGLNFYRFSVSWSRILPSGFANQINQAGIDYYNNLINEMLANNIKPFLTI 435
           YK DV ++ E+G+  YRFS+SWSRILP G  + IN+ GI +Y +L   +  NNI+P +T+
Sbjct: 62  YKEDVALLAEIGVTNYRFSISWSRILPDGTLSTINEEGIKFYRDLCLLLKENNIEPVVTL 121

Query: 436 YHWDLPQSFQDLG-GWANPMIVDWFETTLRFC 528
           +H+D+P +  D G  W N    + FE     C
Sbjct: 122 FHFDMPLAIYDNGTAWLNRENCEHFEKFADLC 153



 Score = 48.0 bits (109), Expect = 6e-06
 Identities = 22/52 (42%), Positives = 31/52 (59%)
 Frame = +2

Query: 89  FPDYFEFGASTASYQVEGAWDEDGKSLSIWDVAAHMSPSPIKDGSTGDVAAD 244
           FP  F+   +TA+YQ+EGA D +G+  S WD A  + P  I D S  D++ D
Sbjct: 7   FPKNFKLATATAAYQIEGAKDLNGRGFSTWD-AIRLEPGRILDNSDPDLSCD 57



 Score = 29.5 bits (63), Expect = 2.4
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +3

Query: 513 YAKVLFENFGDRVKFWISINE 575
           +A + F+ FGD VK WI+ NE
Sbjct: 149 FADLCFQKFGDLVKTWITYNE 169


>U41557-9|AAA83309.1|  479|Caenorhabditis elegans Hypothetical
           protein C50F7.10 protein.
          Length = 479

 Score = 83.8 bits (198), Expect = 1e-16
 Identities = 37/92 (40%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
 Frame = +1

Query: 256 YKRDVEIMKELGLNFYRFSVSWSRILPSGFANQINQAGIDYYNNLINEMLANNIKPFLTI 435
           YK DV ++ ++G+  YRFS+SWSRILP G    IN+ GI +Y ++   +  N I+P +T+
Sbjct: 62  YKEDVALLSKIGVTSYRFSISWSRILPDGTLKTINEDGIQFYRDICLLLRDNGIEPIVTL 121

Query: 436 YHWDLPQSFQDLG-GWANPMIVDWFETTLRFC 528
           +H+D+P S  D G  W N    + FE     C
Sbjct: 122 FHFDMPLSIYDNGTSWLNKENCEHFEKFADLC 153



 Score = 41.1 bits (92), Expect = 7e-04
 Identities = 19/52 (36%), Positives = 29/52 (55%)
 Frame = +2

Query: 89  FPDYFEFGASTASYQVEGAWDEDGKSLSIWDVAAHMSPSPIKDGSTGDVAAD 244
           FP  F+   +TA+YQ+EGA + DG+  S WD +       I D S  D++ +
Sbjct: 7   FPKNFQLATATAAYQIEGAKNLDGRGFSTWD-SIRSENGRIHDNSDPDLSCE 57



 Score = 30.3 bits (65), Expect = 1.4
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = +3

Query: 513 YAKVLFENFGDRVKFWISINEPKQICTEVMAQIKKLRW 626
           +A + F+ FGD VK WI+ NE        + +I+   W
Sbjct: 149 FADLCFQKFGDLVKTWITFNEINMQAWSSVVKIEGELW 186


>U12966-1|AAA20615.3|  510|Caenorhabditis elegans Aldehyde
           dehydrogenase protein1, isoform a protein.
          Length = 510

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 6/82 (7%)
 Frame = +1

Query: 259 KRDVEIMKELGLNFYRFSVSWSRILPSGFANQINQ-AGIDYYNNLINEMLAN--NIKPFL 429
           K DV I  +   N +R    W R+  S     +N+ A +   + +I   L +  N KP+ 
Sbjct: 66  KTDVNIAVKAAQNAFRIGSEWRRMDASQRGVLLNRLADLMERDRVILASLESLDNGKPYA 125

Query: 430 TIYHWDLPQSFQDL---GGWAN 486
             Y+ DLP S + L    GWA+
Sbjct: 126 VAYNADLPLSIKTLRYYAGWAD 147


>U40059-1|AAA81138.3|  867|Caenorhabditis elegans Hypothetical
           protein K03C7.1 protein.
          Length = 867

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 12/35 (34%), Positives = 22/35 (62%)
 Frame = -3

Query: 241 SRDVAGTSVLDRRRRHVSCYIPYRQTLSILIPRSF 137
           S++ AG+++LD+RR  +S  +P  +    +IP  F
Sbjct: 782 SKEKAGSNLLDKRRTIISDALPQSKECEAMIPLMF 816


>U88181-1|AAB42305.1|  149|Caenorhabditis elegans Hypothetical
           protein C55B6.4 protein.
          Length = 149

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 11/32 (34%), Positives = 21/32 (65%)
 Frame = -2

Query: 554 FHPISKILEQNLSVVSNQSTIIGLAQPPKSWK 459
           + PI+   +  + VV+N++ + G  +PPK+WK
Sbjct: 89  YRPITDPSDDRIFVVTNKN-VDGYVKPPKNWK 119


>U61947-2|AAB03135.1|  498|Caenorhabditis elegans Hypothetical
           protein C06G3.6 protein.
          Length = 498

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = +1

Query: 409 NNIKPFLTIYHWDLPQSF 462
           NNI+P L+ YH  LPQ F
Sbjct: 84  NNIRPELSFYHSQLPQLF 101


>AL032648-5|CAA21698.1|  343|Caenorhabditis elegans Hypothetical
           protein Y54G9A.6 protein.
          Length = 343

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = -2

Query: 206 ETETCELLHPISTNSFHP 153
           +T+  EL+HP+ T +FHP
Sbjct: 244 DTDGTELIHPVHTVAFHP 261


>AC006742-7|ABB51176.1| 1434|Caenorhabditis elegans Ferm domain
           (protein4.1-ezrin-radixin-moesin) family protein 5
           protein.
          Length = 1434

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = +2

Query: 41  STIAVRNVRGKSKVRYFPDYFE 106
           S  +VR++RGK K R  P++F+
Sbjct: 520 SVTSVRSMRGKRKTRAIPEFFD 541


>AC006742-1|AAF60499.2| 1393|Caenorhabditis elegans Hypothetical
           protein Y38C1AB.4 protein.
          Length = 1393

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = +2

Query: 41  STIAVRNVRGKSKVRYFPDYFE 106
           S  +VR++RGK K R  P++F+
Sbjct: 479 SVTSVRSMRGKRKTRAIPEFFD 500


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,501,575
Number of Sequences: 27780
Number of extensions: 403170
Number of successful extensions: 939
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 910
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 939
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)