Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0522
         (579 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF039710-7|AAB96687.1|  123|Caenorhabditis elegans Hypothetical ...    29   2.4  
AF067943-4|AAC17661.1|  359|Caenorhabditis elegans Hypothetical ...    28   4.2  
U53148-7|AAB37074.4|  529|Caenorhabditis elegans Cytochrome p450...    27   9.6  

>AF039710-7|AAB96687.1|  123|Caenorhabditis elegans Hypothetical
           protein C46E10.2 protein.
          Length = 123

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 11/16 (68%), Positives = 12/16 (75%)
 Frame = +3

Query: 282 FYNIYWSKYNIFSTTF 329
           F+NIYWS Y IF  TF
Sbjct: 11  FFNIYWSFYAIFGFTF 26


>AF067943-4|AAC17661.1|  359|Caenorhabditis elegans Hypothetical
           protein F59B1.6 protein.
          Length = 359

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = +1

Query: 247 PFINSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 369
           PF++SY+L I +  +F     T F    L L G+ R+ S++
Sbjct: 97  PFLSSYVLVIIWIFLFAITVFTMFIILILRLRGVTRKNSNF 137


>U53148-7|AAB37074.4|  529|Caenorhabditis elegans Cytochrome p450
           family protein 32A1 protein.
          Length = 529

 Score = 27.1 bits (57), Expect = 9.6
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = -1

Query: 573 LKLVVHYMNVLLVVNFDIIQLIWEI*RK 490
           + +V+ Y+  L+VVNF  I  +W I RK
Sbjct: 5   ISIVIGYVIYLVVVNFQQILELWRINRK 32


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,324,615
Number of Sequences: 27780
Number of extensions: 144358
Number of successful extensions: 342
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 340
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 342
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1205362812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)