Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0521
         (665 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    22   5.2  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   6.9  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   6.9  
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       21   6.9  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.1  

>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -3

Query: 366 IRNSVLLSFGNSIVLLLAIVVY*SAIH 286
           I  S+L SFG ++   L I+     IH
Sbjct: 363 ISRSLLTSFGGALTTFLVILFQYGGIH 389


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +2

Query: 362 RIPEECSGGCSSQRSMEHP 418
           R+P +C+G   +  S  HP
Sbjct: 336 RMPHKCNGNAHNCPSRSHP 354


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +2

Query: 362 RIPEECSGGCSSQRSMEHP 418
           R+P +C+G   +  S  HP
Sbjct: 343 RMPHKCNGNAHNCPSRSHP 361


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 7/19 (36%), Positives = 9/19 (47%)
 Frame = +1

Query: 226 DRHETHERRANKKTSNTKH 282
           D+H+ HER       N  H
Sbjct: 87  DKHDRHERHFESSFGNNLH 105


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -2

Query: 472  RSLCEWAK*KFCVSKK 425
            R +C+W K   C  KK
Sbjct: 1141 RKICDWPKSAKCEEKK 1156


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,508
Number of Sequences: 336
Number of extensions: 3464
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17281430
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)