Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0520
         (687 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   1.3  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    23   3.1  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   5.4  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   5.4  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    22   5.4  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    22   5.4  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    22   5.4  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    22   5.4  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -3

Query: 130 CMYIFYTSNIVLSLHCFYL 74
           C+Y FY + I+ ++H  +L
Sbjct: 145 CIYYFYCAFIIFTVHLLFL 163



 Score = 23.4 bits (48), Expect = 1.8
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -3

Query: 130 CMYIFYTSNIVLSLHCFYL 74
           C+Y FY + I+ ++H  +L
Sbjct: 112 CVYYFYYAFIIFTVHLLFL 130



 Score = 23.4 bits (48), Expect = 1.8
 Identities = 6/18 (33%), Positives = 13/18 (72%)
 Frame = -3

Query: 130 CMYIFYTSNIVLSLHCFY 77
           C+Y FY++ I+ ++H  +
Sbjct: 211 CIYYFYSAFIIFTIHLLF 228



 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -3

Query: 130 CMYIFYTSNIVLSLHCFYL 74
           C+Y FY + I+ ++H   L
Sbjct: 237 CIYYFYYAFILFTVHLLLL 255


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -1

Query: 420 SIFERNYFHLHLKSLQ 373
           S++ER Y + HL  +Q
Sbjct: 50  SVYERRYMNAHLSGIQ 65


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 10/42 (23%), Positives = 20/42 (47%)
 Frame = +1

Query: 70  VTDKNNANSGRCWKYKKYTYMMDFIVFSPAIAKCNKLYFIIF 195
           +T +   N  R +  KK    + F+V  P + +   ++ +IF
Sbjct: 86  MTSQIKKNVTRAYCNKKIDRNLQFVVSLPEVERVQWIWLLIF 127


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 10/42 (23%), Positives = 20/42 (47%)
 Frame = +1

Query: 70  VTDKNNANSGRCWKYKKYTYMMDFIVFSPAIAKCNKLYFIIF 195
           +T +   N  R +  KK    + F+V  P + +   ++ +IF
Sbjct: 86  MTSQIKKNVTRAYCNKKIDRNLQFVVSLPEVERVQWIWLLIF 127


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 7/16 (43%), Positives = 13/16 (81%)
 Frame = +2

Query: 614 QINISNYLLCKIHTKI 661
           QI+ + Y+LC++H K+
Sbjct: 225 QISDNLYILCRLHYKL 240


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 10/36 (27%), Positives = 16/36 (44%)
 Frame = -2

Query: 560 FFQKLICKFSLTILYVYNIYIYFTHSANAKYSFRYV 453
           F  + +C       + Y  YIY T+S      F+Y+
Sbjct: 75  FMSRFLC-LPFYSYFFYLSYIYTTYSRKLSGIFKYI 109


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 10/36 (27%), Positives = 16/36 (44%)
 Frame = -2

Query: 560 FFQKLICKFSLTILYVYNIYIYFTHSANAKYSFRYV 453
           F  + +C       + Y  YIY T+S      F+Y+
Sbjct: 31  FMSRFLC-LPFYSYFFYLSYIYTTYSRKLSGIFKYI 65


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 7/16 (43%), Positives = 13/16 (81%)
 Frame = +2

Query: 614 QINISNYLLCKIHTKI 661
           QI+ + Y+LC++H K+
Sbjct: 225 QISDNLYILCRLHYKL 240


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,065
Number of Sequences: 336
Number of extensions: 3169
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)