Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0520
         (687 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g33380.1 68417.m04745 expressed protein                             29   3.8  
At4g19520.1 68417.m02872 disease resistance protein (TIR-NBS-LRR...    28   6.7  
At1g01390.1 68414.m00054 UDP-glucoronosyl/UDP-glucosyl transfera...    28   6.7  

>At4g33380.1 68417.m04745 expressed protein
          Length = 328

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 14/45 (31%), Positives = 24/45 (53%)
 Frame = -2

Query: 599 GVVILQKEVVNLLFFQKLICKFSLTILYVYNIYIYFTHSANAKYS 465
           GV+  ++  + + FF  LI  F L  LY  +++IY  +    KY+
Sbjct: 16  GVLSFKRITLLVCFFNILIALFVLRFLYASSLHIYSNNDNVVKYT 60


>At4g19520.1 68417.m02872 disease resistance protein (TIR-NBS-LRR
            class), putative domain signature TIR-NBS-LRR exists,
            suggestive of a disease resistance protein.
          Length = 1129

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = -3

Query: 169  ILLLREKIQ*NPSCMYIFYTSNIVLSLH 86
            ++LLR K+   P C +IFY   + LSL+
Sbjct: 972  VMLLRSKL---PFCFFIFYEHRVTLSLY 996


>At1g01390.1 68414.m00054 UDP-glucoronosyl/UDP-glucosyl transferase
           family protein contains Pfam profile: PF00201
           UDP-glucoronosyl and UDP-glucosyl transferase
          Length = 480

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 13/46 (28%), Positives = 24/46 (52%)
 Frame = -2

Query: 536 FSLTILYVYNIYIYFTHSANAKYSFRYVPAAFKTNRLEYRSLNETI 399
           F + + +  + YI++  +AN    F ++P   KT   E+R L E +
Sbjct: 124 FDVAVDFHVSPYIFYASNANVLSFFLHLPKLDKTVSCEFRYLTEPL 169


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,865,943
Number of Sequences: 28952
Number of extensions: 210318
Number of successful extensions: 362
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 359
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 362
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1457719448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)