Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0519
         (584 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0VGV8 Cluster: Transcriptional regulator, ArsR family;...    40   0.043
UniRef50_A0YHY6 Cluster: Putative uncharacterized protein; n=1; ...    34   2.2  
UniRef50_A5DF65 Cluster: Putative uncharacterized protein; n=1; ...    33   6.6  
UniRef50_A7ISC3 Cluster: Putative uncharacterized protein; n=4; ...    32   8.7  

>UniRef50_A0VGV8 Cluster: Transcriptional regulator, ArsR family;
           n=2; Comamonadaceae|Rep: Transcriptional regulator, ArsR
           family - Delftia acidovorans SPH-1
          Length = 106

 Score = 39.9 bits (89), Expect = 0.043
 Identities = 17/57 (29%), Positives = 31/57 (54%)
 Frame = +1

Query: 124 LSDKKIKTGCVEFVTAISKPSRTESTRYSWH*VKNVNQLTSEVKTSRERLSRHLGSM 294
           LSD  +     E   A++ P R +     WH  KNV +L +++ T++  +S+HL ++
Sbjct: 10  LSDDSVFESAAELFRAMAAPVRLKIISVLWHGEKNVTELLADITTTQPNMSQHLNTL 66


>UniRef50_A0YHY6 Cluster: Putative uncharacterized protein; n=1;
           Lyngbya sp. PCC 8106|Rep: Putative uncharacterized
           protein - Lyngbya sp. PCC 8106
          Length = 191

 Score = 34.3 bits (75), Expect = 2.2
 Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
 Frame = -3

Query: 285 QMTAESFPRGLDLGCQ-LVNIFYLVPAVSGTFSSTWLAYCCDELNTSCFNFFITQKYQLI 109
           Q+   S P+ +D   Q  V+I  L PA+S  + S W    C  +    FNF +  K Q+I
Sbjct: 57  QINHPSTPQSVDSAKQEKVSILRLFPAISKIYFSDWTGDFCWSVE---FNFAVENKVQII 113

Query: 108 STYY 97
            T Y
Sbjct: 114 QTEY 117


>UniRef50_A5DF65 Cluster: Putative uncharacterized protein; n=1;
           Pichia guilliermondii|Rep: Putative uncharacterized
           protein - Pichia guilliermondii (Yeast) (Candida
           guilliermondii)
          Length = 986

 Score = 32.7 bits (71), Expect = 6.6
 Identities = 21/62 (33%), Positives = 33/62 (53%)
 Frame = +1

Query: 121 LLSDKKIKTGCVEFVTAISKPSRTESTRYSWH*VKNVNQLTSEVKTSRERLSRHLGSMAS 300
           L  ++  +T   + VT  S+  R E+ + S   VK + +   EVK   ERL R +GS+ S
Sbjct: 506 LEQERATQTSKQKDVTDNSEELRNENNKLSAS-VKELQKKLDEVKAELERLKREVGSITS 564

Query: 301 QK 306
           +K
Sbjct: 565 EK 566


>UniRef50_A7ISC3 Cluster: Putative uncharacterized protein; n=4;
           Proteobacteria|Rep: Putative uncharacterized protein -
           Neisseria gonorrhoeae
          Length = 103

 Score = 32.3 bits (70), Expect = 8.7
 Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
 Frame = +1

Query: 151 CVEFVTAISKPSRTESTRYSW-H*VKNVNQLTSEVKTSRERLSRHLGSM 294
           C+   T +S  +R +     W H   NVN+LT  +  SR  +S HL  M
Sbjct: 12  CIPIFTVLSDENRHQILHVLWKHGRMNVNELTEHLHLSRPAVSHHLKIM 60


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 533,244,392
Number of Sequences: 1657284
Number of extensions: 10082808
Number of successful extensions: 22087
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 21432
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22086
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 40820699206
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)