Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0519
         (584 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   1.4  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   4.4  
EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport pe...    21   5.8  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   7.7  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   7.7  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   7.7  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   7.7  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 15/58 (25%), Positives = 22/58 (37%)
 Frame = +1

Query: 382 FMYSLVNEYCILLFIVGTGIFLYSLYVWQCYYYKWQHSL*TILS*FVLNYRLCFLNCL 555
           F   L+   CI  F     +F   L +  C YY +   L    +  +    L FL C+
Sbjct: 228 FYCVLIILLCIYYFYYAFILFTVHLLLLVCIYYFYYMHLLFCCAFIIFTMHLLFLLCI 285



 Score = 23.0 bits (47), Expect = 1.9
 Identities = 14/58 (24%), Positives = 23/58 (39%)
 Frame = +1

Query: 382 FMYSLVNEYCILLFIVGTGIFLYSLYVWQCYYYKWQHSL*TILS*FVLNYRLCFLNCL 555
           F+  +   YC  +      +FL  +Y + C +  +   L    +    N  L FL CL
Sbjct: 142 FLLCIYYFYCAFIIFTVHLLFLLCIYHFFCAFIIFTMHLLFCCAFIFFNMHLLFLLCL 199



 Score = 21.8 bits (44), Expect = 4.4
 Identities = 10/33 (30%), Positives = 13/33 (39%)
 Frame = +1

Query: 382 FMYSLVNEYCILLFIVGTGIFLYSLYVWQCYYY 480
           F Y+ +   C+  F     IF   L    C YY
Sbjct: 103 FYYAFIILLCVYYFYYAFIIFTVHLLFLLCIYY 135



 Score = 21.0 bits (42), Expect = 7.7
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = +1

Query: 382 FMYSLVNEYCILLFIVGTGIFLYSLYVWQCYYY 480
           F Y+ +     LLF++    F+  L+   C YY
Sbjct: 116 FYYAFIIFTVHLLFLLCIYYFVVPLFFLLCIYY 148


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 12/38 (31%), Positives = 16/38 (42%)
 Frame = -1

Query: 119 IN*SQHTILNGDTIIVTRNRLSDELCNNTFIDKDQWFS 6
           IN  Q   +NG  II    R SD+   +      Q +S
Sbjct: 553 INRKQKVFINGTLIIENVERASDQATYDCVAKNSQGYS 590


>EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport
           peptide isoform B protein.
          Length = 120

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +2

Query: 20  LCQ*KCYCTIHLTACFGLLLLCHHL 94
           LC+ +C+ T +   C   LLL   +
Sbjct: 84  LCRSECFSTKYFVGCVESLLLSEEM 108


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = +1

Query: 412 ILLFIVGTGIFLYSLYVWQCYYY 480
           I L +VG  +  + +  W  +YY
Sbjct: 927 IFLMLVGAFVAAFQIDNWTSFYY 949


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = +1

Query: 412 ILLFIVGTGIFLYSLYVWQCYYY 480
           I L +VG  +  + +  W  +YY
Sbjct: 927 IFLMLVGAFVAAFQIDNWTSFYY 949


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = +1

Query: 412 ILLFIVGTGIFLYSLYVWQCYYY 480
           I L +VG  +  + +  W  +YY
Sbjct: 927 IFLMLVGAFVAAFQIDNWTSFYY 949


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = +1

Query: 412 ILLFIVGTGIFLYSLYVWQCYYY 480
           I L +VG  +  + +  W  +YY
Sbjct: 927 IFLMLVGAFVAAFQIDNWTSFYY 949


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,722
Number of Sequences: 336
Number of extensions: 3130
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14621740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)